New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 632112 =NA (NA)4 (0.070)
+ATTTGCAAATCCAAAGCATTACATTAAGACG
3/116 NT NA intergenic (+113/‑70) cstA/ybdD carbon starvation protein involved in peptide utilization; APC peptide transporter family protein/DUF466 family protein
?NC_000913 4344813 = NA (NA)intergenic (+23/+116) melB/yjdF melibiose:sodium symporter/DUF2238 family inner membrane protein

Only 100 of 115 total aligned reads displayed.

TAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATC  >  NC_000913/4344715‑4344912
                                                                                                  |                                                                                                   
tAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATG                                                                                                    <  1:1621487‑M1/100‑1 (MQ=255)
  aaTATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGC                                                                                                  >  1:396309‑M1/1‑100 (MQ=255)
   atatCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCC                                                                                                 >  2:1059742‑M1/1‑100 (MQ=255)
   atatCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGC                                                                                                  <  2:274515‑M1/99‑1 (MQ=255)
        gCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATg                                                                                            <  1:97670/100‑1 (MQ=255)
        gCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATa                                                                                            >  1:646751‑M1/1‑99 (MQ=255)
               aCCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATg                                                                                     <  1:2183539/100‑1 (MQ=255)
                ccGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATaaacatatc                                                                                    >  1:537280‑M1/1‑91 (MQ=255)
                  gCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGttt                                                                                  >  2:1802794/1‑100 (MQ=255)
                  gCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGttt                                                                                  <  2:1036082/100‑1 (MQ=255)
                  gCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGttt                                                                                  <  2:1034759/100‑1 (MQ=255)
                   cccGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTa                                                                                 >  1:1411028‑M2/1‑99 (MQ=255)
                      gAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGCGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTatca                                                                              >  2:1507221‑M2/1‑96 (MQ=255)
                        gCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATaaacatatcgcatcagg                                                                            <  2:984629‑M1/100‑18 (MQ=255)
                         ccTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTatcaggc                                                                           <  2:629763‑M2/100‑8 (MQ=255)
                         ccTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTatcaggc                                                                           <  2:832515‑M2/100‑8 (MQ=255)
                          tgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGcc                                                                          <  2:2078560‑M2/28‑1 (MQ=255)
                          cTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTatcaggcc                                                                          >  2:1744209‑M2/1‑92 (MQ=255)
                          cTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTatcaggcc                                                                          >  2:1797273‑M2/1‑92 (MQ=255)
                           tGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATaaacatatcgcatcaggcca                                                                         <  2:646748‑M1/100‑21 (MQ=255)
                           tGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTatcaggcca                                                                         <  2:238800‑M2/100‑10 (MQ=255)
                           gatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCa                                                                         <  1:822536‑M2/29‑1 (MQ=255)
                            gTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATaaacatatcgcatcaggccat                                                                        <  1:464911‑M1/100‑22 (MQ=255)
                               ccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACGTc                                                                     <  2:2110824‑M2/33‑1 (MQ=255)
                               cATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTc                                                                     >  1:32113/1‑100 (MQ=255)
                                aTGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACGATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACgcc                                                                     >  2:527754/1‑97 (MQ=255)
                                aTGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATaaacatatcgcatcaggccattttc                                                                    <  1:1868483‑M1/100‑26 (MQ=255)
                                aTGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCt                                                                    <  1:2125410/100‑1 (MQ=255)
                                aTGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCt                                                                    >  1:1354594/1‑100 (MQ=255)
                                  gCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTta                                                                  <  1:1416813/100‑1 (MQ=255)
                                   cTGANATTCCNGTNGGNGCNGTGAGTGATGNGANAGCATGANGTGGNCCATGGCGATCGGNGATGGCGTNATGCGATATGTTTATCAGGTCACGTGTna                                                                  >  2:2014675/1‑99 (MQ=255)
                                    tGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaat                                                                <  2:524062/100‑1 (MQ=255)
                                    tGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaat                                                                >  1:1129257/1‑100 (MQ=255)
                                     gATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatg                                                               >  1:1613119/1‑100 (MQ=255)
                                       tatTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgta                                                             >  1:1084002/1‑100 (MQ=255)
                                        atTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgtaa                                                            >  2:1276452/1‑100 (MQ=255)
                                         ttCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgtaat                                                           >  1:705269/1‑100 (MQ=255)
                                           ccGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGc                                                         <  1:2131390/100‑1 (MQ=255)
                                            cggtcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgtaa                                                            <  2:1923836/96‑1 (MQ=255)
                                             ggtcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATGGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCtt                                                       >  2:1290622/1‑100 (MQ=255)
                                               tcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTg                                                     <  1:367097/100‑1 (MQ=255)
                                                  gtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAt                                                  >  1:907216/1‑100 (MQ=255)
                                                  gtGCAGTGAGTGATGTGAAAGCCTGACGCGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGa                                                   <  2:1420181/99‑1 (MQ=255)
                                                   tGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAtt                                                 <  1:1790457/100‑1 (MQ=255)
                                                     cAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTg                                               <  1:1940089/100‑1 (MQ=255)
                                                     cAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTg                                               >  2:1454321/1‑100 (MQ=255)
                                                     cAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTg                                               <  1:1939610/100‑1 (MQ=255)
                                                      agtgagtgATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGc                                              >  1:1292254/1‑100 (MQ=255)
                                                         gagtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCaaa                                           <  2:983154/100‑1 (MQ=255)
                                                          agtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAt                                          <  2:759231/100‑1 (MQ=255)
                                                          agtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAt                                          <  1:1718984/100‑1 (MQ=255)
                                                           gtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGACTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAt                                          >  2:2339652/1‑99 (MQ=255)
                                                            tgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAttt                                        >  1:680912/1‑100 (MQ=255)
                                                            tgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGATTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAttt                                        >  1:701648/1‑100 (MQ=255)
                                                             gaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAtttt                                       >  1:2164940/1‑100 (MQ=255)
                                                             gaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAtttt                                       >  1:1959305/1‑100 (MQ=255)
                                                              aTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTg                                      <  1:1020076/100‑1 (MQ=255)
                                                               tgtgAAGGCCTGACGTGGATAATCGCTGACGAAAATCGCCTGATGCGATATGTTTATCAGGCCACGCCTTCATGTACTGCTGCGTTTTTGCACATTTTGt                                     >  2:1960424/1‑100 (MQ=255)
                                                               tgtgAAAGCCTGACGTGGACAATAGCTAACGAAAATTGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGt                                     <  1:1655004/100‑1 (MQ=255)
                                                               tgtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGt                                     >  2:2089694/1‑100 (MQ=255)
                                                               tgtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGt                                     >  1:805435/1‑100 (MQ=255)
                                                               tgtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGt                                     <  1:438577/100‑1 (MQ=255)
                                                                gtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTa                                    >  1:2249358/1‑100 (MQ=255)
                                                                gtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTa                                    <  1:1225429/100‑1 (MQ=255)
                                                                 tgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAAGGTGATGCTTTGGATTTGCAAATTTTGTAg                                   >  2:522712/1‑100 (MQ=255)
                                                                  gAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGa                                  >  2:1006866/1‑100 (MQ=255)
                                                                   aaaGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGATTTGGATTTGAAAATTTTGTCGAc                                 >  1:2200311/1‑100 (MQ=255)
                                                                    aaGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAcc                                >  2:79313/1‑100 (MQ=255)
                                                                      gCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCgg                              <  2:2149782/100‑1 (MQ=255)
                                                                      gCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGAATTTGCAAATTTTGTAGACCgg                              >  2:1088199/1‑100 (MQ=255)
                                                                      gCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGAGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCgg                              <  2:543780/100‑1 (MQ=255)
                                                                       ccTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCgg                              >  1:1502207/1‑99 (MQ=255)
                                                                        cTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGAt                            >  1:86790/1‑100 (MQ=255)
                                                                        cTGACGTGGACAAGAGCTAACGAAAGTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCg                               <  2:2313/97‑1 (MQ=255)
                                                                          gACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATaa                          >  1:1223607/1‑100 (MQ=255)
                                                                              tGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGaa                      >  1:1924165/1‑100 (MQ=255)
                                                                               ggACAATAGCTAACGAAAATGGCCTGCTGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAt                     >  1:1063049/1‑100 (MQ=255)
                                                                               ggACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAt                     >  2:9797/1‑100 (MQ=255)
                                                                               ggACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAt                     <  1:43246/100‑1 (MQ=255)
                                                                               ggACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTCTGTAGACCGGATAAGGaa                      >  1:867472/1‑99 (MQ=255)
                                                                                gACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTCTCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAtt                    >  2:1448657/1‑100 (MQ=255)
                                                                                    aTAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcg                >  1:1249287/1‑100 (MQ=255)
                                                                                     tAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgc               >  2:66365/1‑100 (MQ=255)
                                                                                      aGCTATCGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcg                <  2:1063044/98‑1 (MQ=255)
                                                                                      aGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgcc              <  1:132630/100‑1 (MQ=255)
                                                                                      aGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgcc              <  1:1398754/100‑1 (MQ=255)
                                                                                      aGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAACGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgcc              <  1:827003/100‑1 (MQ=255)
                                                                                       gCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTGATGCTTTGGGTTTGCAAATTTTGTAGACCGTATAAGGa                       >  2:891523/1‑90 (MQ=255)
                                                                                       gCTAACGAAAATGGCCTGATGCGATATGTATATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGTAAATTTTGTAGACCGGATAAGGAATTCAcgccg             <  2:1418904/100‑1 (MQ=255)
                                                                                        cTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccgc            >  1:1620730/1‑100 (MQ=255)
                                                                                         tAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCa           >  1:32051/1‑100 (MQ=255)
                                                                                         tAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCa           >  1:1686233/1‑100 (MQ=255)
                                                                                          aaCGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCAt          >  2:351010/1‑100 (MQ=255)
                                                                                          aaCGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCAt          >  2:1698735/1‑100 (MQ=255)
                                                                                           aCGAAAATGGCCTGATGCGATATGTTTatcaggccattttcgttagctattgtccacgtcaggctttcacatcactcactgcaccgaccggaatatcagc         <  1:2095752‑M2/100‑74 (MQ=255)
                                                                                             gAAAATGGCCTGATGCGATATGTTTatcaggccattttcgttagctattgtccacgtcaggctttcacatcactcactgcaccgaccggaatatcagcat       <  1:1868483‑M2/100‑76 (MQ=255)
                                                                                              aaaaTGGCCTGATGCGATATGTTTatcaggccattttcgttagctattgtccacgtcaggctttcacatcactcactgcaccgaccggaatatcagcatg      <  2:537277‑M2/100‑77 (MQ=255)
                                                                                                 aTGGCCTGATGCGATATGTTTatcaggccattttcgttagctattgtccacgtcaggctttcacatcactcactgcaccgaccggaatatcagcatgaac   <  1:464911‑M2/100‑80 (MQ=255)
                                                                                                  tGGCCTGATaaacatatcgcatcaggccattttcgttagctattgtccacgtcaggctttcacatcactcactgcaccgaccggaatatcagcatgaaca  <  2:238800‑M1/100‑92 (MQ=255)
                                                                                                  tGGCCTGATGCGATATGTTTatcaggccattttcgttagctattgtccacgtcaggctttcacatcactcactgcaccgaccggaatatcagcatgaaca  <  2:646748‑M2/100‑81 (MQ=255)
                                                                                                  |                                                                                                   
TAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATC  >  NC_000913/4344715‑4344912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.