New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2617939 =	NA (NA)	4 (0.050)	4/164	NT	NA	intergenic (+2/+136)	yfgD/hda	putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation
	?	NC_000913	2617967 =	NA (NA)					intergenic (+30/+108)	yfgD/hda	putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation

GATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAA  >  NC_000913/2617868‑2618065                                                                                                    |                                                                                                   gATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACAtt                                                                                                    >  2:1789740/1‑100 (MQ=255)    tgtgGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGcc                                                                                                 <  1:805494/100‑1 (MQ=255)     gaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTGCCg                                                                                                >  2:873021‑M1/68‑100 (MQ=255)       ggTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGa                                                                                              <  1:2128461/100‑1 (MQ=255)       ggTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGa                                                                                              >  1:2194855/1‑100 (MQ=255)       ggTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGa                                                                                              <  1:2230942/100‑1 (MQ=255)       ggTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGa                                                                                              >  1:686508/1‑100 (MQ=255)        gTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGAt                                                                                             >  1:1407357/1‑100 (MQ=255)          cgcgAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGc                                                                                           >  1:295678/1‑100 (MQ=255)           gcgAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCg                                                                                          <  2:179359/100‑1 (MQ=255)            cgAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGa                                                                                         >  2:1366783/1‑100 (MQ=255)                tGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCt                                                                                     >  1:531043/1‑100 (MQ=255)                  gCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTg                                                                                   >  1:1193121/1‑100 (MQ=255)                  gCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTg                                                                                   <  2:2128043/100‑1 (MQ=255)                   cAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGc                                                                                  >  1:732014/1‑100 (MQ=255)                   cAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGc                                                                                  >  2:390273/1‑100 (MQ=255)                     aaGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCa                                                                                >  1:438741/1‑100 (MQ=255)                      aGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAACCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCa                                                                                <  2:2248477/99‑1 (MQ=255)                         gcgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTc                                                                            <  1:1166730/100‑1 (MQ=255)                         gcgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTc                                                                            <  1:396207/100‑1 (MQ=255)                         gcgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTc                                                                            >  1:1120836/1‑100 (MQ=255)                         gcgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTc                                                                            <  1:224537/100‑1 (MQ=255)                         gcgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTc                                                                            <  2:2124537/100‑1 (MQ=255)                          cgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCt                                                                           >  2:984063/1‑100 (MQ=255)                          cgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCt                                                                           >  2:1834121/1‑100 (MQ=255)                          cgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCt                                                                           <  1:1384114/100‑1 (MQ=255)                             aTTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTAt                                                                        <  2:1850402/100‑1 (MQ=255)                              ttGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATc                                                                       >  1:1421238/1‑100 (MQ=255)                                ggTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCg                                                                     >  2:1739262/1‑100 (MQ=255)                                ggTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCg                                                                     >  1:2261473/1‑100 (MQ=255)                                  tcgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGc                                                                   <  1:1539856/100‑1 (MQ=255)                                   cgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGcc                                                                  >  1:2304469/1‑100 (MQ=255)                                    tctcACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCt                                                                 <  2:872123/97‑1 (MQ=255)                                     tcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGATGCTTGCCACGTCTTATCCGGCCTa                                                                >  2:1279453/1‑100 (MQ=255)                                       cACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTaga                                                              >  1:872127/1‑98 (MQ=255)                                       cACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACg                                                              >  2:1303486/1‑100 (MQ=255)                                        aCCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGa                                                             <  1:616047/100‑1 (MQ=255)                                         ccGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGCAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGaa                                                            <  2:1964977/100‑1 (MQ=255)                                          cGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAAt                                                           <  2:2159102/100‑1 (MQ=255)                                          cGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAAt                                                           <  1:1055549/100‑1 (MQ=255)                                           ggAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATa                                                          >  2:244311/1‑100 (MQ=255)                                                aGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATg                                                     <  1:184797/100‑1 (MQ=255)                                                aGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATg                                                     >  1:1418350/1‑100 (MQ=255)                                                 ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                                                    <  1:216225/100‑1 (MQ=255)                                                 ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                                                    <  2:1992082/100‑1 (MQ=255)                                                 ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                                                    <  2:1421230/100‑1 (MQ=255)                                                 ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                                                    >  1:1541085/1‑100 (MQ=255)                                                 atctcTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                                                    <  1:1579357/96‑1 (MQ=255)                                                  gTACTGGAAAACGTAGGTTAAGAGGCGCTCCATCGAGAGTTGAAACACACTGCCGGATGCGACGCACACCACGACTGACCCGGCCTACGAATACTATGGa                                                   <  2:1253544/100‑1 (MQ=255)                                                   tACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAt                                                  >  1:1337757/1‑100 (MQ=255)                                                   tACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAt                                                  <  1:2279774/100‑1 (MQ=255)                                                   tACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACACTTGCCACGTCTTCTCCGACCTACGAATACTATGAAt                                                  <  2:1373786/100‑1 (MQ=39)                                                     cTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGagat                                                >  2:1579347/1‑97 (MQ=255)                                                       ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                              >  1:1263851/1‑100 (MQ=255)                                                            tCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgc                                         >  2:1645413/1‑100 (MQ=255)                                                             cGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgcg                                        <  2:438738/100‑1 (MQ=255)                                                              gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt                                       <  1:1469278/100‑1 (MQ=255)                                                              gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt                                       <  2:1023483/100‑1 (MQ=255)                                                               tGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGATGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTa                                      <  1:1279459/100‑1 (MQ=255)                                                                gggTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGGGTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTa                                      <  2:853921/99‑1 (MQ=255)                                                                  gTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTT                                   >  2:116218‑M1/1‑100 (MQ=255)                                                                   ttAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTC                                  <  2:686505‑M1/100‑1 (MQ=255)                                                                   cggcaatgtgcttcaactagcgatggagcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTc                                  >  2:873021‑M2/34‑100 (MQ=255)                                                                    tAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCG                                 >  2:240255‑M1/1‑100 (MQ=255)                                                                     aaGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATCCTCTGGATTAACTTCGCGTAGTTCGG                                <  2:471702‑M1/100‑1 (MQ=255)                                                                        atgtgcttcaactagcgatggagcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATa                             >  1:2349900‑M2/29‑100 (MQ=255)                                                                         tgtgcttcaactagcgatggagcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTATATCGGATaa                            >  1:341481‑M2/28‑100 (MQ=255)                                                                         TGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGTTTAACTTCGCGTAGTTCGGATaa                            <  2:278014‑M1/100‑1 (MQ=255)                                                                          GTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAg                           >  2:903440‑M1/1‑100 (MQ=255)                                                                           tgcttcaactagcgatggagcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                          >  1:854011‑M2/26‑100 (MQ=255)                                                                            GCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTCACTTCGCGTAGTTCGGATAAGGc                         <  1:1020216‑M1/100‑1 (MQ=255)                                                                            GCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGc                         <  1:1487993‑M1/100‑1 (MQ=255)                                                                            GCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGc                         <  1:442475‑M1/100‑1 (MQ=255)                                                                             CTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCg                        <  1:798499‑M1/100‑1 (MQ=255)                                                                             CTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCg                        >  1:1271742‑M1/1‑100 (MQ=255)                                                                               ccATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGtt                      <  1:240256/100‑1 (MQ=255)                                                                                cATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTc                     >  1:1530524/1‑100 (MQ=255)                                                                                cATAGCTAGTTGAAGCACATTGCCGGATGTGACGCGTGCCTCCTCTTAACCGGCGTACGAATACCATGGATCATCTTCGCGTTGTTCGGATAAGGCGTTc                     <  2:505073/100‑1 (MQ=255)                                                                                    gCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCgcgc                 >  1:1022717/1‑100 (MQ=255)                                                                                    gCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCgcgc                 >  1:468708/1‑100 (MQ=255)                                                                                          tGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCatc           <  2:1983401‑M2/100‑4 (MQ=255)                                                                                           gAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATgcggcgcgaacgccttatcc          <  2:1164643‑M1/100‑21 (MQ=255)                                                                                           gAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCGGCatcc          <  1:592866‑M2/100‑5 (MQ=255)                                                                                           gAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCatcc          <  1:24699‑M2/100‑5 (MQ=255)                                                                                           gAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATCGAGTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCatcc          >  2:925603‑M2/1‑96 (MQ=255)                                                                                            aaGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCatccg         >  2:602613‑M2/1‑95 (MQ=255)                                                                                             agcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGa        >  2:920784‑M2/8‑100 (MQ=255)                                                                                              gcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc       <  1:1558601‑M2/94‑1 (MQ=255)                                                                                              gcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc       >  2:1356109‑M2/7‑100 (MQ=255)                                                                                              gcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc       <  2:1948294‑M2/94‑1 (MQ=255)                                                                                                acatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACaa     <  2:131801‑M2/96‑1 (MQ=255)                                                                                                  atTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATa   <  1:232645‑M2/98‑1 (MQ=255)                                                                                                   ttGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATgcggcgcgaacgccttatccgaactacg  <  1:1834134‑M1/100‑29 (MQ=255)                                                                                                   tTGCCTGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATaa  <  1:2107244‑M2/99‑1 (MQ=255)                                                                                                    |                                                                                                   GATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAA  >  NC_000913/2617868‑2618065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.