BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2842423 =	NA (NA)	4 (0.050)	5/164	NT	NA	noncoding (1/79 nt)	REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	2842453 =	NA (NA)	4 (0.050)	5/164	NT	NA	noncoding (31/79 nt)	REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 131 total aligned reads displayed.

TAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCTG  >  NC_000913/2842354‑2842551

 tgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtaggccggatgcggcgtgaacgccttatccggcc                                                                                                    <  1:588198‑M2/1‑1 (MQ=255)

 tgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtaggccggatgcggcgtgaacgccttatccggcCt                                                                                                   <  2:1337314‑M2/2‑1 (MQ=255)

 aaGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                                                   >  1:218722/1‑100 (MQ=255)

 aaGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                                                   <  2:122482/100‑1 (MQ=255)

  gatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                                  >  1:682527‑M1/68‑100 (MQ=255)

  aGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                                  >  1:1294140/1‑100 (MQ=255)

   gAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                 <  1:2182868/100‑1 (MQ=255)

    aaaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa                                                                                                <  2:1945018/100‑1 (MQ=255)

       tCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGt                                                                                             <  2:1978005/100‑1 (MQ=255)

           tCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCa                                                                                         <  2:259756/100‑1 (MQ=255)

                 ggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAAcc                                                                                   >  2:1040114/1‑100 (MQ=255)

                 ggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAAcc                                                                                   >  2:533992/1‑100 (MQ=255)

                 ggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAAcc                                                                                   >  2:602424/1‑100 (MQ=255)

                 ggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAAcc                                                                                   <  1:80998/100‑1 (MQ=255)

                  gtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCa                                                                                  <  1:9428/100‑1 (MQ=255)

                   tataAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCAt                                                                                 >  2:8120/1‑100 (MQ=255)

                     taAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGa                                                                               >  1:105466/1‑100 (MQ=255)

                      aaaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGaa                                                                              <  2:2086432/100‑1 (MQ=255)

                      aaaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGaa                                                                              >  1:2228257/1‑100 (MQ=255)

                       aaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAg                                                                             <  2:1743274/100‑1 (MQ=255)

                         aaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGc                                                                           >  2:638477/1‑100 (MQ=255)

                           aGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGccc                                                                         <  2:1603058/100‑1 (MQ=255)

                            gTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCg                                                                        <  2:2045617/100‑1 (MQ=255)

                            gTGATTGCCAGTAATGGGGAAGATGTAGAGTATGGAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCg                                                                        <  1:1967251/100‑1 (MQ=255)

                              gATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCAGGGCTACATGTCGCACCCACCATGCAGGCCCg                                                                        >  2:799176/1‑98 (MQ=37)

                               aTTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATa                                                                     <  2:1732646/100‑1 (MQ=255)

                               aTTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGACCTACATGTCGCACGAACCATGAAGGCCGGa                                                                       >  1:2096162/1‑98 (MQ=255)

                                  tctaGTACTGGGGAAGATATAGAGTAGGTAACAGTGCCGGCTGCGGCGTGAACGCATTATCCAGCCTATATGTCGAGCGAACGATGAAGGCCAGATa                                                                     >  2:602882/4‑97 (MQ=255)

                                  gCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagc                                                                  >  2:1467131/1‑100 (MQ=255)

                                  gCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagc                                                                  >  2:1012212/1‑100 (MQ=255)

                                  gCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagc                                                                  >  1:391878/1‑100 (MQ=255)

                                  gCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagc                                                                  >  2:1219850/1‑100 (MQ=255)

                                  gCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagc                                                                  >  1:2061527/1‑100 (MQ=255)

                                   ccAGTAATGGGGAAGATTTAGAGTAGGTAAGAGGGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGGCCGATAagcg                                                                 >  2:1548458/1‑100 (MQ=255)

                                    cAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgc                                                                <  2:270117/100‑1 (MQ=255)

                                       tAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgcagc                                                             <  2:199267/100‑1 (MQ=255)

                                           ggggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATACGGCCTACATGTCGCACGAACAATGAAGGCCCGATAAGCGCAGCGCAt                                                         >  2:2114559/1‑100 (MQ=255)

                                             ggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGCTACGCGCAGCGCATCg                                                       >  2:1645461/1‑100 (MQ=255)

                                             ggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCg                                                       >  1:301666/1‑100 (MQ=255)

                                             ggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCg                                                       >  1:1711966/1‑100 (MQ=255)

                                             ggAAGATTTAGAGTAGGTAACAGTGCCGGATGAGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCg                                                       >  1:2233611/1‑100 (MQ=255)

                                              gAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCgg                                                      <  1:654570/100‑1 (MQ=255)

                                                aGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGc                                                    >  1:1189455/1‑100 (MQ=255)

                                                   tttAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAt                                                 <  2:590788/100‑1 (MQ=255)

                                                   tttAGAGTAGGTAACAGTGCCGGATGAGGCGTGAACACCTTATCCGGACTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCAACGGGCCAt                                                 >  2:1635320/1‑100 (MQ=255)

                                                    ttAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAtt                                                <  1:1958568/100‑1 (MQ=255)

                                                     tAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAttt                                               <  2:730026/100‑1 (MQ=255)

                                                      agagTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTa                                              <  2:1876697/100‑1 (MQ=255)

                                                      agagTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTa                                              >  1:299017/1‑100 (MQ=255)

                                                      agagTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTa                                              <  1:533995/100‑1 (MQ=255)

                                                      agagTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTa                                              <  1:902388/100‑1 (MQ=255)

                                                        agTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGc                                            <  1:1219043/100‑1 (MQ=255)

                                                          gcgacatgtaggccggataaggcgttcacgccgcatccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCAt                                          >  1:2231661‑M2/42‑100 (MQ=255)

                                                            ggTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCAttt                                        >  2:1013915/1‑100 (MQ=255)

                                                            ggTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCAttt                                        >  1:1908032/1‑100 (MQ=255)

                                                            ggTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCAttt                                        >  2:2327002/1‑100 (MQ=255)

                                                             gTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTg                                       >  1:382428/1‑100 (MQ=255)

                                                              tAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTgg                                      >  1:2313926/1‑100 (MQ=255)

                                                                aCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCa                                    <  1:1915945/100‑1 (MQ=255)

                                                                aCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCa                                    <  1:733619/100‑1 (MQ=255)

                                                                  taggccggataaggcgttcacgccgcatccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATc                                  >  1:682527‑M2/34‑100 (MQ=255)

                                                                   aggccggataaggcgttcacgccgcatccggcCTACGTGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCa                                 >  1:1654288‑M2/33‑100 (MQ=255)

                                                                   agGCCGGATAAGGCGTTCACGCCGCATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCa                                 <  2:1337314‑M1/98‑1 (MQ=255)

                                                                    gGCCGGATAAGGCGTTCACGCCGCATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCa                                 <  1:588198‑M1/98‑1 (MQ=255)

                                                                     ggCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCaga                               <  1:1595168‑M1/98‑1 (MQ=255)

                                                                     GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACTATGAAGGCCCGTGAAGCGCAGCGCATCGTGCGATTTAGCATTCGGCATCag                                >  2:1370483‑M1/1‑99 (MQ=255)

                                                                     GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCaga                               >  2:1266919‑M1/1‑100 (MQ=255)

                                                                      CCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCagag                              >  1:857235‑M1/1‑100 (MQ=255)

                                                                       CGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGc                             <  1:678523‑M1/100‑1 (MQ=255)

                                                                        GGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCt                            >  1:2265626‑M1/1‑100 (MQ=255)

                                                                        GGATGCGGCGCGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCTTCGGGCAATTTAGCATTTGGCATCAGAGCt                            >  2:1546716‑M1/1‑100 (MQ=255)

                                                                           TGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGt                         >  2:2233592‑M1/1‑100 (MQ=255)

                                                                           TGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGt                         >  2:848503‑M1/1‑100 (MQ=255)

                                                                           TGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGt                         >  2:969991‑M1/1‑100 (MQ=255)

                                                                           TGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGt                         >  2:1242769‑M1/1‑100 (MQ=255)

                                                                            gcggcgTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGtt                        >  1:865269/1‑100 (MQ=255)

                                                                            gcggcgTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGtt                        <  1:1922062/100‑1 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTc                       >  2:119917/1‑100 (MQ=255)

                                                                              ggcgTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCa                      >  1:186651/1‑100 (MQ=255)

                                                                                cgTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCAc                     >  1:497400/1‑99 (MQ=255)

                                                                                   gAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCa                 <  2:969402/100‑1 (MQ=255)

                                                                                   gAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCa                 >  2:1718086/1‑100 (MQ=255)

                                                                                        ccTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAg            >  1:1721591/1‑100 (MQ=255)

                                                                                        ccTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAg            >  2:676684/1‑100 (MQ=255)

                                                                                         cTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGa           >  1:2260955/1‑100 (MQ=255)

                                                                                          ttATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGaa          <  2:105465/100‑1 (MQ=255)

                                                                                           tATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAAc         <  2:1410609/100‑1 (MQ=255)

                                                                                           tATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAAc         >  1:359231/1‑100 (MQ=255)

                                                                                           tATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAAc         <  1:1193450/100‑1 (MQ=255)

                                                                                           tATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAAc         <  1:1291129/100‑1 (MQ=255)

                                                                                           tATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATAGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAAc         >  2:345841/1‑100 (MQ=255)

                                                                                            atccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACa        <  1:1563231‑M2/93‑1 (MQ=255)

                                                                                            atccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACa        <  2:1719644‑M2/93‑1 (MQ=255)

                                                                                              ccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACAt       >  1:504414‑M2/6‑99 (MQ=255)

                                                                                              ccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATc      <  2:1903905‑M2/95‑1 (MQ=255)

                                                                                              ccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATCTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATc      >  2:1651154‑M2/6‑100 (MQ=255)

                                                                                               cggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATc      >  1:1365339‑M2/5‑99 (MQ=255)

                                                                                                ggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATccc    >  1:1563937‑M2/4‑100 (MQ=255)

                                                                                                ggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATccc    <  1:1971233‑M2/97‑1 (MQ=255)

                                                                                                  cCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCTg  <  1:2114577‑M2/99‑1 (MQ=255)

TAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCTG  >  NC_000913/2842354‑2842551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.