New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 375319	NA (NA)	5 (0.070) +CTACAAATTCCCGCGCCAT	4/160	10.8	7.5%	noncoding (390/436 nt)	REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences	REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences
	?	NC_000913	508782 =	76 (0.830)					noncoding (201/236 nt)	REP48 (repetitive extragenic palindromic) element; contains 5 REP sequences	REP48 (repetitive extragenic palindromic) element; contains 5 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

TGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/375283‑375319 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCATGCGTCGATGCC  >  NC_000913/508782‑508834                                      |||||||||||||||||||                                                      TGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCCTACAAATTCTCACGCCATCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGC           >  1:897441/1‑100  GTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCCTACAAATTCTCACGCCATCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCt          >  1:917833/1‑99      gtCTGATAAGACGCGTTAGCGTCGCATCAGGCCTACAAATTCTCGCGCCATCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCtggga      <  2:917834/98‑6      GCCTGATAAGACGCGTTAGCGTCGCATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGcaga      >  1:593786/1‑96          GATAAGACGCGTTAGCGTCGCATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCAGATGCC  <  2:593787/100‑1                                      |||||||||||||||||||                                                      TGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/375283‑375319 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCATGCGTCGATGCC  >  NC_000913/508782‑508834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.