New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3674381 =NA (NA)8 (0.080) 7/164 NT NA noncoding (1/93 nt) REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3674411 = NA (NA)noncoding (31/93 nt) REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 150 total aligned reads displayed.

CTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTA  >  NC_000913/3674282‑3674475
                                                                                                   |                                                                                              
cttcttCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAgg                                                                                                <  2:2623190/100‑1 (MQ=255)
cttcttCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACACAGCCTTAAAATAgg                                                                                                <  1:1505431/100‑1 (MQ=255)
 ttcttcGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCCCCGCCGAATATAAAGAAGACCCGCGCATGCCGGGGAAAACGCAGCCTTAAAATAGGc                                                                                               <  1:252947/100‑1 (MQ=255)
 ttcttcGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAgg                                                                                                <  1:2080881/99‑1 (MQ=255)
  tcttcGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGcc                                                                                              >  1:40572/1‑100 (MQ=255)
    gacgagtttcaagaggttatgtgcgcattatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCgg                                                                                            >  2:1361169‑M1/96‑100 (MQ=255)
     acgagtttcaagaggttatgtgcgcattatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCGGa                                                                                           <  2:1818951‑M1/6‑1 (MQ=255)
       gCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATg                                                                                         <  2:512535/100‑1 (MQ=255)
       gCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATg                                                                                         <  1:3009031/100‑1 (MQ=255)
       gCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATg                                                                                         >  1:664835/1‑100 (MQ=255)
       gCCCGTTTGACGCTGTTTTGAGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATg                                                                                         >  1:1875075/1‑100 (MQ=255)
        cccGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATgc                                                                                        >  2:2837662/1‑100 (MQ=255)
          cGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATgcgg                                                                                      >  2:1839232/1‑100 (MQ=255)
          cGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATgcgg                                                                                      >  2:2018695/1‑100 (MQ=255)
           gTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATgcggc                                                                                     <  1:2647828/100‑1 (MQ=255)
            tttGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATgcggcg                                                                                    >  2:1606565/1‑100 (MQ=255)
            tttGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATgcggcg                                                                                    <  1:2321644/100‑1 (MQ=255)
             caagaggttatgtgcgcattatagccggatgcgatgcgggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCgg                                                                                            <  1:1633851‑M1/5‑1 (MQ=255)
                 cGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGGAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTaaa                                                                                >  2:2660543/1‑99 (MQ=255)
                 cGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAAc                                                                               >  2:284849/1‑100 (MQ=255)
                 cGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAAc                                                                               >  2:1122695/1‑100 (MQ=255)
                 cGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAAc                                                                               >  1:1574528/1‑100 (MQ=255)
                  gCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACg                                                                              <  1:524540/100‑1 (MQ=255)
                  gCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACg                                                                              <  2:1532539/100‑1 (MQ=255)
                  gCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACg                                                                              <  2:2225309/100‑1 (MQ=255)
                   cgggtttGCGCGGCGTGGAGTGGCACCGCCGTATATAGAGACGACCGGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACg                                                                              <  1:2906492/95‑1 (MQ=255)
                    tGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGcc                                                                            <  2:1442642/100‑1 (MQ=255)
                    tGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGcc                                                                            <  2:1476425/100‑1 (MQ=255)
                    tGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGcc                                                                            <  1:2396868/100‑1 (MQ=255)
                    tGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGcc                                                                            <  2:2311096/100‑1 (MQ=255)
                     gTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCt                                                                           >  2:632962/1‑100 (MQ=255)
                     gTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCt                                                                           >  2:2301848/1‑100 (MQ=255)
                        ttGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTAt                                                                        >  1:1246098/1‑100 (MQ=255)
                          gcgcattatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCGGATGCGGCGTAAACGCCTTATcc                                                                      >  2:950196‑M1/74‑100 (MQ=255)
                           cgcgGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCg                                                                     >  2:1530609/1‑100 (MQ=255)
                            gcggcgTGGATGGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCgg                                                                    <  1:1072696/100‑1 (MQ=255)
                            gcattatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCGGATGCGGCGTAAACGCCTTATCCgg                                                                    >  2:815436‑M1/72‑100 (MQ=255)
                             cattatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                                   >  2:3025897‑M1/71‑100 (MQ=255)
                              ggcgTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCa                                                                  >  2:698457/1‑100 (MQ=255)
                               gtgTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGTGTAAACGCCTTATCCGGCAt                                                                 <  1:1862449/98‑1 (MQ=255)
                                tatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCGGATGCGGCGTAAACGCCTTATCCGGCATa                                                                >  2:2674813‑M1/68‑100 (MQ=255)
                                 gTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATAc                                                               <  1:2564339/100‑1 (MQ=255)
                                  tGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACg                                                              >  2:1449159/1‑100 (MQ=255)
                                  tGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTAGCCGGCATACg                                                              <  2:1004049/100‑1 (MQ=255)
                                   ggATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCTGCGTAAACGCCTTATCCGGCATACGa                                                             <  1:541180/100‑1 (MQ=255)
                                    gATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGAt                                                            <  1:1408307/100‑1 (MQ=255)
                                      ttGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGAttt                                                          <  1:420810/100‑1 (MQ=255)
                                        gCCACCGCCGAATATAAAGACGACCCGCGTATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTa                                                        <  1:1839055/100‑1 (MQ=255)
                                        gCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTa                                                        >  1:2248877/1‑100 (MQ=255)
                                        gCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTa                                                        >  1:2248866/1‑100 (MQ=255)
                                        gCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTa                                                        >  2:1784614/1‑100 (MQ=255)
                                        gCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGACTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTa                                                        >  2:2840962/1‑100 (MQ=255)
                                          cACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTAtt                                                      >  2:14989/1‑100 (MQ=255)
                                          cACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTAtt                                                      >  2:1750886/1‑100 (MQ=255)
                                           aCCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTc                                                     >  2:2420959/1‑100 (MQ=255)
                                            ccgccgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCg                                                    <  2:1151363/100‑1 (MQ=255)
                                               ccgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGc                                                  >  2:462960/1‑99 (MQ=255)
                                                gctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCt                                                >  2:2168236‑M1/52‑100 (MQ=255)
                                                cgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCt                                                >  2:2777235/1‑100 (MQ=255)
                                                cgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCt                                                <  2:1919472/100‑1 (MQ=255)
                                                 gAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTg                                               <  2:2394584/100‑1 (MQ=255)
                                                     ataAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTc                                           >  1:1546927/1‑100 (MQ=255)
                                                      taAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTcc                                          >  1:2993962/1‑100 (MQ=255)
                                                       aaaGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTccc                                         >  2:2086005/1‑100 (MQ=255)
                                                        aaGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTcccc                                        >  1:2034694/1‑100 (MQ=255)
                                                          gacgacCCGCGAATGCCGGGGAAAACGCCGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGt                                      <  2:907116/100‑1 (MQ=255)
                                                            cgacCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAg                                    >  2:217132/1‑100 (MQ=255)
                                                             gacCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAgg                                   <  1:1449153/100‑1 (MQ=255)
                                                             gacCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAgg                                   <  1:2117524/100‑1 (MQ=255)
                                                              acCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCAGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGc                                  >  1:1686873/1‑100 (MQ=255)
                                                               cccGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAgg                                   <  1:765070/98‑1 (MQ=255)
                                                               cccGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGcc                                 >  2:2108179/1‑100 (MQ=255)
                                                                 cgcgAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCgg                               >  1:1658629/1‑100 (MQ=255)
                                                                  ggtcaTGCAGGGGAAAAGGCAGTCTTAGAATCGGCCGGATGCGGCGGATAGGTCTTATCTGGCATACTATCTTATTCGGCCGGGCTCCCCGTAGGCGGGa                              <  1:2545462/96‑1 (MQ=255)
                                                                  gcgAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGa                              >  2:249467/1‑100 (MQ=255)
                                                                  gcgAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGa                              <  2:264345/100‑1 (MQ=255)
                                                                    gAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATa                            <  2:2788391/100‑1 (MQ=255)
                                                                      aTGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAg                          <  2:1222611/100‑1 (MQ=255)
                                                                       tGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGa                         <  2:2653221/100‑1 (MQ=255)
                                                                           ggggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATgcg                     >  2:1315574/1‑100 (MQ=255)
                                                                           ggggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATgcg                     >  2:3042411/1‑100 (MQ=255)
                                                                           ggggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATgcg                     <  2:2692054/100‑1 (MQ=255)
                                                                             ggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGcc                   <  2:1967545/100‑1 (MQ=255)
                                                                             ggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGcc                   >  2:1000718/1‑100 (MQ=255)
                                                                               aaaaCGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAg                 <  2:1686882/100‑1 (MQ=255)
                                                                               aaaaCGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAg                 <  1:2786950/100‑1 (MQ=255)
                                                                                   cGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatc             >  2:1815194/1‑100 (MQ=255)
                                                                                    gCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcg            <  2:2199798/100‑1 (MQ=255)
                                                                                    gCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcg            <  2:605432/100‑1 (MQ=255)
                                                                                     cAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcgc           >  1:802542/1‑100 (MQ=255)
                                                                                     cAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcgc           <  1:2959123/100‑1 (MQ=255)
                                                                                     cAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcgc           >  1:643001/1‑100 (MQ=255)
                                                                                        ccTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcgcatc        >  1:2019066/1‑100 (MQ=255)
                                                                                        ccTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcgcat         <  1:2840945/99‑1 (MQ=255)
                                                                                         cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGTCAgcatcgcattc       <  2:2061838/100‑3 (MQ=255)
                                                                                         cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATcc       >  2:2881687/1‑100 (MQ=255)
                                                                                         cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATcc       >  2:2703188/1‑100 (MQ=255)
                                                                                         cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATcc       >  2:1844506/1‑100 (MQ=255)
                                                                                          ttAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCg      >  2:1216851/1‑100 (MQ=255)
                                                                                            aaaaTAGGCCGGATGCGGCGTGAACGCCGTAGCCGGCATACGGTTTTAGTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGc    <  1:1820996/100‑1 (MQ=37)
                                                                                                   |                                                                                              
CTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTA  >  NC_000913/3674282‑3674475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.