New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3674381 =NA (NA)8 (0.080) 7/164 NT NA noncoding (1/93 nt) REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3674411 = NA (NA)noncoding (31/93 nt) REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 144 total aligned reads displayed.

GGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCA  >  NC_000913/3674312‑3674509
                                                                                                   |                                                                                                  
ggcgTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCa                                                                                                    >  2:698457/1‑100 (MQ=255)
attatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCGGATGCGGCGTAAACGCCTTATCCGGCa                                                                                                    >  1:1565264‑M1/70‑100 (MQ=255)
 gtgTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGTGTAAACGCCTTATCCGGCAt                                                                                                   <  1:1862449/98‑1 (MQ=255)
 gcgTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGTCGGATGCGGCGTAAACGCCTTATCCGGCAt                                                                                                   <  1:671089/100‑1 (MQ=255)
  tatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCGGATGCGGCGTAAACGCCTTATCCGGCATa                                                                                                  >  2:2674813‑M1/68‑100 (MQ=255)
  cgTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATa                                                                                                  <  1:1646621/100‑1 (MQ=255)
   gTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATAc                                                                                                 >  1:1967533/1‑100 (MQ=255)
    tGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTAGCCGGCATACg                                                                                                <  2:1004049/100‑1 (MQ=255)
     ggATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCTGCGTAAACGCCTTATCCGGCATACGa                                                                                               <  1:541180/100‑1 (MQ=255)
      gATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGAt                                                                                              <  1:1408307/100‑1 (MQ=255)
        ttGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGAttt                                                                                            <  2:1870556/100‑1 (MQ=255)
          gCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTa                                                                                          >  1:2248866/1‑100 (MQ=255)
          gCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTa                                                                                          >  1:2248877/1‑100 (MQ=255)
          gCCAACGCCGAATATAAAGACGACCCGCGTATGCCGGGGAAAACGCAGCCGTAAAATAGGCCGGATCCGGCGTAAACGCCTTATACGGCATACGATTTTa                                                                                          <  1:1839221/100‑1 (MQ=38)
            cACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTAtt                                                                                        >  2:1750886/1‑100 (MQ=255)
            cACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTAtt                                                                                        >  2:14989/1‑100 (MQ=255)
             gcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTc                                                                                       >  1:2232827‑M1/57‑100 (MQ=255)
             aCCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTc                                                                                       >  2:2420959/1‑100 (MQ=255)
             aCCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTc                                                                                       >  1:2692038/1‑100 (MQ=255)
              ccgccgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCg                                                                                      <  2:1151363/100‑1 (MQ=255)
                 ccgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGc                                                                                    >  2:462960/1‑99 (MQ=255)
                  gctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCt                                                                                  >  2:2168236‑M1/52‑100 (MQ=255)
                  cgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCt                                                                                  <  2:1734960/100‑1 (MQ=255)
                  cgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCt                                                                                  >  1:2521008/1‑100 (MQ=255)
                  cgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCt                                                                                  >  1:2554618/1‑100 (MQ=255)
                   gAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCtn                                                                                 <  2:28164/100‑2 (MQ=255)
                    aaTATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCCgg                                                                                >  2:2846478/1‑100 (MQ=255)
                       ataAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTc                                                                             >  1:1546927/1‑100 (MQ=255)
                        taAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTcc                                                                            >  2:1474761/1‑100 (MQ=255)
                        taAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTcc                                                                            >  1:2993962/1‑100 (MQ=255)
                         aaaGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTccc                                                                           <  2:2762622/100‑1 (MQ=255)
                         aaaGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTccc                                                                           >  2:2086005/1‑100 (MQ=255)
                          aaGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTcccc                                                                          >  1:2034694/1‑100 (MQ=255)
                          aaGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTcccc                                                                          >  2:2357227/1‑100 (MQ=255)
                           aGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCg                                                                         >  2:2938819/1‑100 (MQ=255)
                            gacgacCCGCGAATGCCGGGGAAAACGCCGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGt                                                                        <  2:907116/100‑1 (MQ=255)
                              cgacCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAg                                                                      >  2:217132/1‑100 (MQ=255)
                               gacCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAgg                                                                     <  1:1449153/100‑1 (MQ=255)
                               gacCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAgg                                                                     <  1:2117524/100‑1 (MQ=255)
                                acCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCAGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGc                                                                    >  1:1686873/1‑100 (MQ=255)
                                 cccGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAgg                                                                     <  1:765070/98‑1 (MQ=255)
                                 cccGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGcc                                                                   >  2:2108179/1‑100 (MQ=255)
                                 cccGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGcc                                                                   <  2:1795088/100‑1 (MQ=255)
                                   cgcgAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCgg                                                                 >  2:564538/1‑100 (MQ=255)
                                    ggtcaTGCAGGGGAAAAGGCAGTCTTAGAATCGGCCGGATGCGGCGGATAGGTCTTATCTGGCATACTATCTTATTCGGCCGGGCTCCCCGTAGGCGGGa                                                                <  1:2545462/96‑1 (MQ=255)
                                    gcgAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGa                                                                <  2:264345/100‑1 (MQ=255)
                                      gAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATa                                                              <  2:2788391/100‑1 (MQ=255)
                                       aaTGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATaa                                                             <  2:664840/100‑1 (MQ=255)
                                           ccGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATg                                                         <  2:2494062/100‑1 (MQ=255)
                                             ggggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATgcg                                                       >  2:1509588/1‑100 (MQ=255)
                                               ggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGcc                                                     <  2:1182663/100‑1 (MQ=255)
                                               ggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGcc                                                     >  2:1000718/1‑100 (MQ=255)
                                               ggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGcc                                                     <  2:1967545/100‑1 (MQ=255)
                                                 aaaaCGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAg                                                   <  2:1239830/100‑1 (MQ=255)
                                                 aaaaCGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAg                                                   <  2:1686882/100‑1 (MQ=255)
                                                 aaaaCGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAg                                                   <  1:2786950/100‑1 (MQ=255)
                                                     cGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatc                                               >  2:1815194/1‑100 (MQ=255)
                                                      gCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcg                                              <  1:2878217/100‑1 (MQ=255)
                                                       cAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcgc                                             >  1:802542/1‑100 (MQ=255)
                                                       cAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcgc                                             >  1:643001/1‑100 (MQ=255)
                                                           cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGTCAgcatcgcattc                                         <  2:2061838/100‑3 (MQ=255)
                                                           cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATcc                                         >  2:1844506/1‑100 (MQ=255)
                                                           cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATcc                                         >  2:2703188/1‑100 (MQ=255)
                                                           cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATcc                                         >  2:2172107/1‑100 (MQ=255)
                                                            ttAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCg                                        >  2:1216851/1‑100 (MQ=255)
                                                              aaaaTAGGCCGGATGCGGCGTGAACGCCGTAGCCGGCATACGGTTTTAGTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGc                                      <  1:1820996/100‑1 (MQ=37)
                                                                aaTAGGCCGGATGCGGTGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCta                                    <  1:1784603/100‑1 (MQ=255)
                                                                  tatgccggataaggcgtttacgccgcatccggcATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCtata                                  >  2:2674813‑M2/34‑100 (MQ=255)
                                                                     gccggataaggcgtttacgccgcatccggcATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATg                               >  2:3025897‑M2/31‑100 (MQ=255)
                                                                     gccggataaggcgtttacgccgcatccggcATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATg                               >  2:2164597‑M2/31‑100 (MQ=255)
                                                                       cGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGCCTCCCCGTAGGCCGGATAAGATGCTACAGCAACGCATCCAGcctacgcgga                             >  2:1622794/1‑91 (MQ=25)
                                                                        ggataaggcgtttacgccgcatccggcATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATgcgc                            >  2:950196‑M2/28‑100 (MQ=255)
                                                                         GATGCGGCGTAAACGCCTTATCCGGCATACGAGTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGca                           >  1:4587‑M1/1‑100 (MQ=255)
                                                                          ATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGcac                          <  2:359568‑M1/100‑1 (MQ=255)
                                                                           TGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGcaca                         >  2:1931025‑M1/1‑100 (MQ=255)
                                                                              ggcgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATaa                      >  2:840905/1‑100 (MQ=255)
                                                                              ggcgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATaa                      >  2:2497743/1‑100 (MQ=255)
                                                                               gcgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAAc                     >  1:48902/1‑100 (MQ=255)
                                                                               gcgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAAc                     >  2:874502/1‑100 (MQ=255)
                                                                                cgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAAcc                    <  1:2115085/100‑1 (MQ=255)
                                                                                cgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAAcc                    <  1:2657428/100‑1 (MQ=255)
                                                                                cgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAAcc                    <  1:2018683/100‑1 (MQ=255)
                                                                                 gTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACct                   >  1:1296317/1‑100 (MQ=255)
                                                                                  tAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACctc                  >  1:2036066/1‑100 (MQ=255)
                                                                                   aaaCGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACctct                 >  2:1811744/1‑100 (MQ=255)
                                                                                   aaaCGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACctct                 >  2:1362730/1‑100 (MQ=255)
                                                                                      cGCCTTATCCGGCATACGCTTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTg               >  2:14309/1‑99 (MQ=255)
                                                                                       gCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGaa             <  1:2542043/100‑1 (MQ=255)
                                                                                        ccTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGaaa            >  2:2302230/1‑100 (MQ=255)
                                                                                         cTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAAc           >  2:1229998/1‑100 (MQ=255)
                                                                                         cTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAAc           <  1:284847/100‑1 (MQ=255)
                                                                                           tATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTc         >  2:2866950/1‑100 (MQ=255)
                                                                                           tATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTc         <  2:2485685/100‑1 (MQ=255)
                                                                                            atacggcATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGAATCCGGCTATAATGCGCACATAACCTCTTGAAACTCg        <  2:1979228‑M2/93‑1 (MQ=255)
                                                                                             tccggcATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACt          <  1:2988605‑M2/91‑1 (MQ=255)
                                                                                              ccggcATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCCGCATCGCATCCGGCTATAATGCGCACATAACCTCTTg               <  1:1633851‑M2/86‑1 (MQ=255)
                                                                                              ccggcATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTc      >  2:1361169‑M2/6‑100 (MQ=255)
                                                                                                ggcATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTccc    >  2:2702635‑M2/4‑100 (MQ=255)
                                                                                                ggcATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTccc    >  2:1403496‑M2/4‑100 (MQ=255)
                                                                                                 gcATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTcccc   <  2:2084836‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                  
GGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCA  >  NC_000913/3674312‑3674509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.