New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 361212 =NA (NA)7 (0.070) 7/162 NT NA noncoding (5/29 nt) REP29 (repetitive extragenic palindromic) element; contains 1 REP sequences REP29 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 361237 = NA (NA)intergenic (+91/+12) cynX/lacA putative cyanate transporter/thiogalactoside acetyltransferase

Only 100 of 158 total aligned reads displayed.

ACGTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTC  >  NC_000913/361113‑361311
                                                                                                   |                                                                                                    
ggcgttccttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattg                                                                                                      <  2:2650409‑M1/1‑1 (MQ=255)
 gcgttccttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGc                                                                                                     >  1:1578254‑M1/99‑100 (MQ=255)
  gTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAGTGTAGATCGCTGAACTTGTAGGcc                                                                                                    >  1:2108700/1‑100 (MQ=255)
  gTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGcc                                                                                                    <  2:2011614/100‑1 (MQ=255)
  gTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGcc                                                                                                    >  2:1523664/1‑100 (MQ=255)
  gTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGcc                                                                                                    >  1:71451/1‑100 (MQ=255)
  cgttccttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGcc                                                                                                    >  2:636835‑M1/98‑100 (MQ=255)
  cgttccttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGcc                                                                                                    >  1:1447503‑M1/98‑100 (MQ=255)
  cgttccttgtcgggttattcgcgaaataaacgaacgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGcc                                                                                                    >  1:1212527‑M1/98‑100 (MQ=255)
   ttttCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCt                                                                                                   >  2:2288812/1‑100 (MQ=255)
    ttccttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTg                                                                                                  >  1:1176883‑M1/96‑100 (MQ=255)
     tccttgtcgggttattctcgaaataaacgaccgggataagcaatattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTGa                                                                                                 >  1:1298206‑M1/95‑100 (MQ=255)
      tCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGAt                                                                                                <  1:2545717/100‑1 (MQ=255)
      tCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGAt                                                                                                <  2:2416588/100‑1 (MQ=255)
       cttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTGATa                                                                                               <  1:657957‑M1/8‑1 (MQ=255)
       cttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTGATa                                                                                               >  1:2191047‑M1/93‑100 (MQ=255)
        cGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATaa                                                                                              >  1:76479/1‑100 (MQ=255)
               gtgGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAACGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGc                                                                                      >  2:2149011/1‑100 (MQ=255)
                ttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagttcaaattataaaaattGCCTGATAAGC‑GCAGCg                                                                                     >  2:2598264‑M1/84‑100 (MQ=255)
                tgGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATacgctgcgct                                                                                      <  2:1577266/100‑10 (MQ=255)
                tgGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCg                                                                                     <  1:1084082/100‑1 (MQ=255)
                tgGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCg                                                                                     <  2:737717/100‑1 (MQ=255)
                     ccaacagccATGATGCGACGCTTGCTCCTGCGCTTTCTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCa                                                                                <  2:1330402/92‑1 (MQ=38)
                      aaaGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAg                                                                               <  2:1304596/100‑1 (MQ=255)
                      aaaGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAg                                                                               <  1:445588/100‑1 (MQ=255)
                      aaaGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAg                                                                               <  2:712691/100‑1 (MQ=255)
                      aaaGAGGCATGATGCGACGCTCGTTCCTGCGCTTTGTGCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAg                                                                               <  2:2779986/100‑1 (MQ=255)
                       cgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTGATAAGC‑GCAGCGTATCAgg                                                                              <  2:821234‑M1/24‑1 (MQ=255)
                       aaGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAgg                                                                              <  2:2613156/100‑1 (MQ=255)
                       aaGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAgg                                                                              <  2:1879179/100‑1 (MQ=255)
                        gaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTGATAAGC‑GCAGCGTATCAGGc                                                                             >  1:194817‑M1/76‑100 (MQ=255)
                        agagGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGc                                                                             <  1:2930219/100‑1 (MQ=255)
                              atgatgCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAAtttt                                                                       <  2:633342/100‑1 (MQ=255)
                              atgatgCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAAtttt                                                                       >  2:1639716/1‑100 (MQ=255)
                                gatgCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTta                                                                     >  2:2934645/1‑100 (MQ=255)
                                 atgCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTtat                                                                    <  1:2867922/100‑1 (MQ=255)
                                  tgCGACGCTTGTTGCTGCGCTTTGTTCTTGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTGTCAGGGAATTTTta                                                                     <  1:1440940/98‑1 (MQ=38)
                                   gCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATaa                                                                  >  2:2229797/1‑100 (MQ=255)
                                    cGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATCAGC‑GCAGCGTATCAGGCAATTTTTATaa                                                                  >  2:303698/1‑99 (MQ=255)
                                    cGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAAt                                                                 >  2:1745398/1‑100 (MQ=255)
                                       cGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTa                                                              <  1:2821518/100‑1 (MQ=255)
                                          ttGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAAc                                                           <  2:76480/100‑1 (MQ=255)
                                          ccgatcttGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAAc                                                           <  2:1828552/93‑1 (MQ=255)
                                           tGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACt                                                          >  2:1280371/1‑100 (MQ=255)
                                           tGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACt                                                          <  1:2122867/100‑1 (MQ=255)
                                             ttCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGa                                                        >  1:1205545/1‑100 (MQ=255)
                                              tCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGAc                                                       <  2:2360988/100‑1 (MQ=255)
                                                 tGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAAcagatcgg                                                    >  1:1828541/1‑93 (MQ=255)
                                                 tGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGAt                                                    >  1:2403563/1‑100 (MQ=255)
                                                   cgcTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTc                                                  <  2:1206502/100‑1 (MQ=255)
                                                     cTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCaa                                                >  2:1395950/1‑100 (MQ=255)
                                                        tGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACtt                                             <  2:2204791/100‑1 (MQ=255)
                                                        tGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACtt                                             >  2:165086/1‑100 (MQ=255)
                                                         gTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACttt                                            >  2:484546/1‑100 (MQ=255)
                                                         gTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACt                                              >  1:2944452/1‑98 (MQ=255)
                                                          ttCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTta                                           >  1:1297705/1‑100 (MQ=255)
                                                               gCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATc                                      >  2:2811668/1‑100 (MQ=255)
                                                                  ggATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCttt                                   >  2:1162272/1‑100 (MQ=255)
                                                                  ggATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCttt                                   <  2:71452/100‑1 (MQ=255)
                                                                   gATGCGGCTAATGTAGATTGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCttn                                   <  1:1341983/99‑2 (MQ=255)
                                                                   gATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTg                                  <  2:1845718/100‑1 (MQ=255)
                                                                    aTGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGa                                 <  1:520397/100‑1 (MQ=255)
                                                                       cGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAaat                              <  2:975201/100‑1 (MQ=255)
                                                                        ggCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAaata                             >  2:888247/1‑100 (MQ=255)
                                                                          cTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAaataat                           <  1:2049570/100‑1 (MQ=255)
                                                                            aaTGTAGATCGCTGAGCTTGTAGGCCTGATAAAC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAg                         >  1:941117/1‑100 (MQ=255)
                                                                            aaTGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAg                         <  1:2073068/100‑1 (MQ=255)
                                                                              tGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCATTTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTg                       >  1:2650394/1‑100 (MQ=255)
                                                                               gTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGc                      >  2:1895388/1‑100 (MQ=255)
                                                                               gTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGc                      <  2:866000/100‑1 (MQ=255)
                                                                                tAGATCGCTGGACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCt                     <  1:1140955/100‑1 (MQ=255)
                                                                                  gATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTa                   >  1:720845/1‑100 (MQ=255)
                                                                                    tCGCTGAACTTGTAGTCCTTATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATc                 >  1:690173/1‑100 (MQ=255)
                                                                                    tCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATc                 <  1:1720800/100‑1 (MQ=255)
                                                                                     cGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATcc                >  1:2174635/1‑100 (MQ=255)
                                                                                      gCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATccc               <  2:572400/100‑1 (MQ=255)
                                                                                      gCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATccc               <  1:281136/100‑1 (MQ=255)
                                                                                      gCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATccc               <  1:2785129/100‑1 (MQ=255)
                                                                                      gCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATccc               <  1:2564340/100‑1 (MQ=255)
                                                                                       cTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCg              <  2:281122/100‑1 (MQ=255)
                                                                                        tGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATTTTTGAAATAATAGTGCTTATCCCg              >  1:1037989/1‑99 (MQ=255)
                                                                                        tGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTAGACTTTATAATCTTTGAAATAATAGTGCTTATCCCgg             >  1:1060721/1‑100 (MQ=255)
                                                                                         tataaaaattGCCTGATACGCTGC‑GCTTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCg              <  1:1389172‑M1/88‑1 (MQ=255)
                                                                                         gAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGt            >  2:224842/1‑100 (MQ=255)
                                                                                         gAACTTCTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGt            <  1:2706410/100‑1 (MQ=255)
                                                                                          ataaaaattGCCTGATACGC‑TGCGCTTATCAGGCAATTTTTATAATTTAAACTGACGTTTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTc           <  1:448907‑M1/91‑1 (MQ=255)
                                                                                          aaCTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTc           <  1:2433588/100‑1 (MQ=255)
                                                                                           aCTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCg          <  1:340263/100‑1 (MQ=255)
                                                                                           aCTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCg          <  1:373319/100‑1 (MQ=255)
                                                                                            cTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGt         >  2:2968020/1‑100 (MQ=255)
                                                                                             ttGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGtt        <  1:1895377/100‑1 (MQ=255)
                                                                                              tGTAGGCCTGATAAGC‑GCAGAGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGttt       >  1:1864066/1‑100 (MQ=255)
                                                                                                tAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTAt     <  2:3053381/100‑1 (MQ=255)
                                                                                                nttGCCTGATACGCTGC‑GCTTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTAt     <  1:821229‑M1/97‑1 (MQ=255)
                                                                                                attGCCTGATACGCTGC‑GCTTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTAt     <  1:1705125‑M1/97‑1 (MQ=255)
                                                                                                  ggCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTAttt   >  2:292006/1‑100 (MQ=255)
                                                                                                  ggCCTGATAAGC‑GCAGCGGATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGACATAATAGTGCTTATCCCGGTCGTTTAttt   >  1:1842063/1‑100 (MQ=255)
                                                                                                   GCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTc  >  2:2448354‑M1/1‑100 (MQ=255)
                                                                                                   GCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTc  <  1:2261257‑M1/100‑1 (MQ=255)
                                                                                                   GCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGGGCTTATCCCGGTCGTTTATTTc  >  2:1379458‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                    
ACGTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGC‑GCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTC  >  NC_000913/361113‑361311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.