New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 361212 =NA (NA)7 (0.070) 7/162 NT NA noncoding (5/29 nt) REP29 (repetitive extragenic palindromic) element; contains 1 REP sequences REP29 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 361237 = NA (NA)intergenic (+91/+12) cynX/lacA putative cyanate transporter/thiogalactoside acetyltransferase

Only 100 of 158 total aligned reads displayed.

ACGTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTC  >  NC_000913/361113‑361311
                                                                                                   |                                                                                                    
ggcgttccttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattg                                                                                                      <  2:2650409‑M1/1‑1 (MQ=255)
 gcgttccttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGc                                                                                                     >  1:1578254‑M1/99‑100 (MQ=255)
  gTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAGTGTAGATCGCTGAACTTGTAGGcc                                                                                                    >  1:2108700/1‑100 (MQ=255)
  gTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGcc                                                                                                    <  2:2011614/100‑1 (MQ=255)
  gTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGcc                                                                                                    >  2:1523664/1‑100 (MQ=255)
  gTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGcc                                                                                                    >  1:71451/1‑100 (MQ=255)
  cgttccttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGcc                                                                                                    >  2:636835‑M1/98‑100 (MQ=255)
  cgttccttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGcc                                                                                                    >  1:1447503‑M1/98‑100 (MQ=255)
  cgttccttgtcgggttattcgcgaaataaacgaacgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGcc                                                                                                    >  1:1212527‑M1/98‑100 (MQ=255)
   ttttCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCt                                                                                                   >  2:2288812/1‑100 (MQ=255)
    ttccttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTg                                                                                                  >  1:1176883‑M1/96‑100 (MQ=255)
     tccttgtcgggttattctcgaaataaacgaccgggataagcaatattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTGa                                                                                                 >  1:1298206‑M1/95‑100 (MQ=255)
      tCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGAt                                                                                                <  1:2545717/100‑1 (MQ=255)
      tCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGAt                                                                                                <  2:2416588/100‑1 (MQ=255)
       cttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTGATa                                                                                               <  1:657957‑M1/8‑1 (MQ=255)
       cttgtcgggttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTGATa                                                                                               >  1:2191047‑M1/93‑100 (MQ=255)
        cGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATaa                                                                                              >  1:76479/1‑100 (MQ=255)
               gtgGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAACGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGc                                                                                      >  2:2149011/1‑100 (MQ=255)
                ttattcgcgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagttcaaattataaaaattGCCTGATAAGCGCAGCg                                                                                     >  2:2598264‑M1/84‑100 (MQ=255)
                tgGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATacgctgcgct                                                                                      <  2:1577266/100‑10 (MQ=255)
                tgGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCg                                                                                     <  1:1084082/100‑1 (MQ=255)
                tgGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCg                                                                                     <  2:737717/100‑1 (MQ=255)
                     ccaacagccATGATGCGACGCTTGCTCCTGCGCTTTCTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCa                                                                                <  2:1330402/92‑1 (MQ=38)
                      aaaGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAg                                                                               <  2:1304596/100‑1 (MQ=255)
                      aaaGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAg                                                                               <  1:445588/100‑1 (MQ=255)
                      aaaGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAg                                                                               <  2:712691/100‑1 (MQ=255)
                      aaaGAGGCATGATGCGACGCTCGTTCCTGCGCTTTGTGCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAg                                                                               <  2:2779986/100‑1 (MQ=255)
                       cgaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTGATAAGCGCAGCGTATCAgg                                                                              <  2:821234‑M1/24‑1 (MQ=255)
                       aaGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAgg                                                                              <  2:2613156/100‑1 (MQ=255)
                       aaGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAgg                                                                              <  2:1879179/100‑1 (MQ=255)
                        gaaataaacgaccgggataagcactattatttcaaagattataaagttgaatcgtcagtttaaattataaaaattGCCTGATAAGCGCAGCGTATCAGGc                                                                             >  1:194817‑M1/76‑100 (MQ=255)
                        agagGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGc                                                                             <  1:2930219/100‑1 (MQ=255)
                              atgatgCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAAtttt                                                                       <  2:633342/100‑1 (MQ=255)
                              atgatgCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAAtttt                                                                       >  2:1639716/1‑100 (MQ=255)
                                gatgCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTta                                                                     >  2:2934645/1‑100 (MQ=255)
                                 atgCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTtat                                                                    <  1:2867922/100‑1 (MQ=255)
                                  tgCGACGCTTGTTGCTGCGCTTTGTTCTTGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTGTCAGGGAATTTTta                                                                     <  1:1440940/98‑1 (MQ=38)
                                   gCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATaa                                                                  >  2:2229797/1‑100 (MQ=255)
                                    cGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATCAGCGCAGCGTATCAGGCAATTTTTATaa                                                                  >  2:303698/1‑99 (MQ=255)
                                    cGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAAt                                                                 >  2:1745398/1‑100 (MQ=255)
                                       cGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTa                                                              <  1:2821518/100‑1 (MQ=255)
                                          ttGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAAc                                                           <  2:76480/100‑1 (MQ=255)
                                          ccgatcttGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAAc                                                           <  2:1828552/93‑1 (MQ=255)
                                           tGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACt                                                          >  2:1280371/1‑100 (MQ=255)
                                           tGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACt                                                          <  1:2122867/100‑1 (MQ=255)
                                             ttCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGa                                                        >  1:1205545/1‑100 (MQ=255)
                                              tCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGAc                                                       <  2:2360988/100‑1 (MQ=255)
                                                 tGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAAcagatcgg                                                    >  1:1828541/1‑93 (MQ=255)
                                                 tGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGAt                                                    >  1:2403563/1‑100 (MQ=255)
                                                   cgcTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTc                                                  <  2:1206502/100‑1 (MQ=255)
                                                     cTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCaa                                                >  2:1395950/1‑100 (MQ=255)
                                                        tGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACtt                                             <  2:2204791/100‑1 (MQ=255)
                                                        tGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACtt                                             >  2:165086/1‑100 (MQ=255)
                                                         gTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACttt                                            >  2:484546/1‑100 (MQ=255)
                                                         gTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACt                                              >  1:2944452/1‑98 (MQ=255)
                                                          ttCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTta                                           >  1:1297705/1‑100 (MQ=255)
                                                               gCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATc                                      >  2:2811668/1‑100 (MQ=255)
                                                                  ggATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCttt                                   >  2:1162272/1‑100 (MQ=255)
                                                                  ggATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCttt                                   <  2:71452/100‑1 (MQ=255)
                                                                   gATGCGGCTAATGTAGATTGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCttn                                   <  1:1341983/99‑2 (MQ=255)
                                                                   gATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTg                                  <  2:1845718/100‑1 (MQ=255)
                                                                    aTGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGa                                 <  1:520397/100‑1 (MQ=255)
                                                                       cGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAaat                              <  2:975201/100‑1 (MQ=255)
                                                                        ggCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAaata                             >  2:888247/1‑100 (MQ=255)
                                                                          cTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAaataat                           <  1:2049570/100‑1 (MQ=255)
                                                                            aaTGTAGATCGCTGAGCTTGTAGGCCTGATAAACGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAg                         >  1:941117/1‑100 (MQ=255)
                                                                            aaTGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAg                         <  1:2073068/100‑1 (MQ=255)
                                                                              tGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCATTTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTg                       >  1:2650394/1‑100 (MQ=255)
                                                                               gTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGc                      >  2:1895388/1‑100 (MQ=255)
                                                                               gTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGc                      <  2:866000/100‑1 (MQ=255)
                                                                                tAGATCGCTGGACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCt                     <  1:1140955/100‑1 (MQ=255)
                                                                                  gATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTa                   >  1:720845/1‑100 (MQ=255)
                                                                                    tCGCTGAACTTGTAGTCCTTATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATc                 >  1:690173/1‑100 (MQ=255)
                                                                                    tCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATc                 <  1:1720800/100‑1 (MQ=255)
                                                                                     cGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATcc                >  1:2174635/1‑100 (MQ=255)
                                                                                      gCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATccc               <  2:572400/100‑1 (MQ=255)
                                                                                      gCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATccc               <  1:281136/100‑1 (MQ=255)
                                                                                      gCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATccc               <  1:2785129/100‑1 (MQ=255)
                                                                                      gCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATccc               <  1:2564340/100‑1 (MQ=255)
                                                                                       cTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCg              <  2:281122/100‑1 (MQ=255)
                                                                                        tGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATTTTTGAAATAATAGTGCTTATCCCg              >  1:1037989/1‑99 (MQ=255)
                                                                                        tGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTAGACTTTATAATCTTTGAAATAATAGTGCTTATCCCgg             >  1:1060721/1‑100 (MQ=255)
                                                                                         tataaaaattGCCTGATACGCTGCGCTTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCg              <  1:1389172‑M1/88‑1 (MQ=255)
                                                                                         gAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGt            >  2:224842/1‑100 (MQ=255)
                                                                                         gAACTTCTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGt            <  1:2706410/100‑1 (MQ=255)
                                                                                          ataaaaattGCCTGATACGCTGCGCTTATCAGGCAATTTTTATAATTTAAACTGACGTTTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTc           <  1:448907‑M1/91‑1 (MQ=255)
                                                                                          aaCTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTc           <  1:2433588/100‑1 (MQ=255)
                                                                                           aCTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCg          <  1:340263/100‑1 (MQ=255)
                                                                                           aCTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCg          <  1:373319/100‑1 (MQ=255)
                                                                                            cTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGt         >  2:2968020/1‑100 (MQ=255)
                                                                                             ttGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGtt        <  1:1895377/100‑1 (MQ=255)
                                                                                              tGTAGGCCTGATAAGCGCAGAGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGttt       >  1:1864066/1‑100 (MQ=255)
                                                                                                tAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTAt     <  2:3053381/100‑1 (MQ=255)
                                                                                                nttGCCTGATACGCTGCGCTTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTAt     <  1:821229‑M1/97‑1 (MQ=255)
                                                                                                attGCCTGATACGCTGCGCTTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTAt     <  1:1705125‑M1/97‑1 (MQ=255)
                                                                                                  ggCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTAttt   >  2:292006/1‑100 (MQ=255)
                                                                                                  ggCCTGATAAGCGCAGCGGATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGACATAATAGTGCTTATCCCGGTCGTTTAttt   >  1:1842063/1‑100 (MQ=255)
                                                                                                   GCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTc  >  2:2448354‑M1/1‑100 (MQ=255)
                                                                                                   GCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTc  <  1:2261257‑M1/100‑1 (MQ=255)
                                                                                                   GCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGGGCTTATCCCGGTCGTTTATTTc  >  2:1379458‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                    
ACGTTTTCCGCAGCTGTGGGTCAAAGAGGCATGATGCGACGCTTGTTCCTGCGCTTTGTTCATGCCGGATGCGGCTAATGTAGATCGCTGAACTTGTAGGCCTGATAAGCGCAGCGTATCAGGCAATTTTTATAATTTAAACTGACGATTCAACTTTATAATCTTTGAAATAATAGTGCTTATCCCGGTCGTTTATTTC  >  NC_000913/361113‑361311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.