New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2041152 =NA (NA)8 (0.080) 8/162 NT NA noncoding (1/34 nt) REP142 (repetitive extragenic palindromic) element; contains 1 REP sequences REP142 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2041182 = NA (NA)noncoding (31/34 nt) REP142 (repetitive extragenic palindromic) element; contains 1 REP sequences REP142 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 179 total aligned reads displayed.

TATAAGAAGTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATT  >  NC_000913/2041053‑2041251
                                                                                                   |                                                                                                   
ttctcagttctacttatctatcttattgaaataaaataaattattttggtgatttgaggttgatgacaaacgaaacataacctgatgcgatctgtgtatg                                                                                                     >  1:1234921‑M1/100‑100 (MQ=255)
tacaagaagTTGCGCTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTg                                                                                                     >  1:2391351/4‑100 (MQ=255)
 tctcagttctacttatctatcttattgaaataaaataaattattttggtgatttgaggttgatgacaaacgaaacataacctgatgcgatctgtgtatGc                                                                                                    <  1:909274‑M1/2‑1 (MQ=255)
 ataAGAAGTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGc                                                                                                    >  1:479795/1‑100 (MQ=255)
   aagaagTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCg                                                                                                  <  2:1683035/100‑1 (MQ=255)
    cagttctacttatctatcttattgaaataaaataaattattttggtgatttgaggttgatgacaaacgaaacataacctgatgcgatctgtgtatGCCgg                                                                                                 >  1:1563425‑M1/96‑100 (MQ=255)
    agaagTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCgg                                                                                                 >  1:2310420/1‑100 (MQ=255)
    agaagTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCgg                                                                                                 <  1:1896409/100‑1 (MQ=255)
    agaagTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATAGTGCCGACAAAGTACGCGTTATCCCTGCCgg                                                                                                 >  1:3023/1‑100 (MQ=255)
      gttctacttatctatcttattgaaataaaataaattattttgttgatttgaggttgatgacaaacgaaacataacctgatgcgatctgtgtatGACGGa                                                                                                <  1:2639223‑M1/6‑1 (MQ=255)
      gttctacttatctatcttattgaaataaaataaattattttggtgatttgaggttgatgacaaacgaaacataacctgatgcgatctgtgtatGCCGGAt                                                                                               <  2:443383‑M1/7‑1 (MQ=255)
      gttctacttatctatcttattgaaataaaataaattattttggtgatttgaggttgatgacaaacgaaacataacctgatgcgatctgtgtatGCCGGAt                                                                                               >  1:1292402‑M1/94‑100 (MQ=255)
       agTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGAtg                                                                                              >  2:238179/1‑100 (MQ=255)
       agTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGAtg                                                                                              <  1:2765029/100‑1 (MQ=255)
        gTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGAtgt                                                                                             >  2:1528230/1‑100 (MQ=255)
             gTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGgcgc                                                                                        >  2:2522033/1‑100 (MQ=255)
              tatctatcttattgaaataaaataaattattttggtgatttgaggttgatgacaaacgaaacataacctgatgcgatctgtgtatGCCGGATGTGGcgcg                                                                                       >  1:771963‑M1/86‑100 (MQ=255)
               tCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGa                                                                                      >  2:1097163/1‑100 (MQ=255)
                cccTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGgcgctcg                                                                                     <  1:968886/100‑4 (MQ=255)
                cccTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGgcgctcg                                                                                     >  2:968891/1‑97 (MQ=255)
                 ccTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAgc                                                                                    >  2:1884873/1‑100 (MQ=255)
                 ccTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAgc                                                                                    <  2:2973056/100‑1 (MQ=255)
                    ttttAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGcc                                                                                 <  2:1686984/100‑1 (MQ=255)
                    ttttAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGcc                                                                                 <  2:2264380/100‑1 (MQ=255)
                    ttttAACCGGTTACGCAAGAAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGcc                                                                                 <  2:2143513/100‑1 (MQ=255)
                       tAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTa                                                                              >  2:2922398/1‑100 (MQ=255)
                         aCCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATc                                                                            >  2:245174/1‑100 (MQ=255)
                         aCCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATc                                                                            >  2:599833/1‑100 (MQ=255)
                         aCCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATc                                                                            >  2:1192097/1‑100 (MQ=255)
                          ccGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATcc                                                                           <  1:2267611/100‑1 (MQ=255)
                          ccGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATcc                                                                           >  1:1690873/1‑100 (MQ=255)
                            ggTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCgg                                                                         >  1:1433212/1‑100 (MQ=255)
                            ggTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCgg                                                                         <  2:641051/100‑1 (MQ=255)
                            ggTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCgg                                                                         >  1:1341155/1‑100 (MQ=255)
                            ggTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCgg                                                                         >  2:2686881/1‑100 (MQ=255)
                              ataaaataaattattttggtgatttgaggttgatgacaaacgaaacataacctgatgcgatctgtgtatGCCGGATGTGGCGCGAGCGCCCTATCCGGc                                                                        >  2:821378‑M1/70‑99 (MQ=255)
                               tACGCAAGCAGGTTCACAACAAATTCTCTGTATAACTGCATATTGCCGACAAAGTACGGGTTATCCCTGCCGGATAGGGCGCTCGCGCCACATCCGGCag                                                                      <  1:184796/100‑2 (MQ=21)
                                 cGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGGGCCCTATCCGGCATac                                                                    >  1:1788626/1‑100 (MQ=255)
                                 cGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATac                                                                    <  2:3024/100‑1 (MQ=255)
                                  gCAAGCAGGTTCACAACAAATTATCTGTGTAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCaggga                                                                   <  2:2990143/100‑5 (MQ=255)
                                  gCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATaca                                                                   >  1:428565/1‑100 (MQ=255)
                                      gCAGGTTCACAACAAATTATCTGTATAACTTCATATTGGCGACAAAGTACGCGTTATCCCTGCCGTATGGGGCGCGAGCGCCCTATCCGGCATACACAg                                                                >  1:2550920/1‑99 (MQ=255)
                                        aGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATc                                                             <  1:658614/100‑1 (MQ=255)
                                        aGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATc                                                             <  2:2589879/100‑1 (MQ=255)
                                         ngTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCg                                                            >  1:2414247/2‑100 (MQ=255)
                                         ggTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCATCCCGGATGTGGCGCGAGCGCCCTATCCGGCATAAACAGATc                                                             >  1:568095/1‑99 (MQ=255)
                                           ttttggtgatttgaggttgatgacaaacgaaacataacctgatgcgatctgtgtatGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCa                                                          >  2:1336836‑M1/57‑100 (MQ=255)
                                           ttCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCa                                                          >  2:2191281/1‑100 (MQ=255)
                                              acaacaAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCa                                                       <  2:696308/100‑1 (MQ=255)
                                               caacaaATTATCTGTATAACTTCATATTGCCGACAAAGTTCGCGTTATCCCTGCCGGATGTGGCGCGAGCGCGCTATCCGGCATACACAAATCGCATCAg                                                      >  1:2733547/1‑100 (MQ=255)
                                               caacaaATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAg                                                      >  2:909279/1‑100 (MQ=255)
                                                aacaaATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAgg                                                     >  2:1520736/1‑100 (MQ=255)
                                                aacaaATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAgg                                                     <  1:752704/100‑1 (MQ=255)
                                                    aaTTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTAt                                                 <  1:3049323/100‑1 (MQ=255)
                                                    aaTTATCTGTAGAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTAt                                                 >  1:1600333/1‑100 (MQ=255)
                                                     aTTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATg                                                <  2:1994007/100‑1 (MQ=255)
                                                     aTTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATg                                                >  2:112069/1‑100 (MQ=255)
                                                       tATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGtt                                              >  2:1983910/1‑100 (MQ=255)
                                                         tCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTc                                            >  2:1575281/1‑100 (MQ=255)
                                                          ntGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCg                                           >  2:2517547/2‑100 (MQ=255)
                                                          cTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCg                                           <  1:2520809/100‑1 (MQ=255)
                                                           tGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGt                                          >  1:2316017/1‑100 (MQ=255)
                                                            gTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGtt                                         >  2:1318379/1‑100 (MQ=255)
                                                            gTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGtt                                         <  2:1264578/100‑1 (MQ=255)
                                                              ataACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTg                                       <  2:542958/100‑1 (MQ=255)
                                                               taACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTAGTTTGt                                      >  1:2481744/1‑100 (MQ=255)
                                                                 aCTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtca                                    >  2:2673837/1‑100 (MQ=255)
                                                                 aCTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtca                                    >  1:2853930/1‑100 (MQ=255)
                                                                 aCTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGt                                      >  2:1177631/1‑98 (MQ=255)
                                                                  cTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtcat                                   >  1:2475358/1‑100 (MQ=255)
                                                                  cTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtcat                                   <  1:1727576/100‑1 (MQ=255)
                                                                   ttCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATTTGACGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtcatc                                  <  1:2153376/100‑1 (MQ=255)
                                                                   ttCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtcatc                                  <  1:1479359/100‑1 (MQ=255)
                                                                    tCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtcatca                                 <  1:36001/100‑1 (MQ=255)
                                                                     cATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCaa                                <  2:479799/100‑1 (MQ=255)
                                                                        aaacataacctgatgcgatctgtgtatGCCGGATAGGGCGCTCGCGCCACATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCt                             <  1:2717574‑M1/73‑1 (MQ=255)
                                                                         ttGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTc                            <  1:1097157/100‑1 (MQ=255)
                                                                          tGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCa                           >  2:2312636/1‑100 (MQ=255)
                                                                           gCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCaa                          >  2:1563984/1‑100 (MQ=255)
                                                                             cGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCaaa                         >  1:1526519/1‑99 (MQ=255)
                                                                             cGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAAt                        >  2:2165597/1‑100 (MQ=255)
                                                                             cGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAAt                        >  1:2224208/1‑100 (MQ=255)
                                                                             cGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAAt                        <  2:2853947/100‑1 (MQ=255)
                                                                               aCAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCa                      <  2:1478023/100‑1 (MQ=255)
                                                                                 aaaGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCAcc                    <  2:2720492/100‑1 (MQ=255)
                                                                                 aaaGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCAcc                    <  2:317932/100‑1 (MQ=255)
                                                                                  aaGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCa                   >  2:1309383/1‑100 (MQ=255)
                                                                                  aaGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCa                   >  1:2809752/1‑100 (MQ=255)
                                                                                   aGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCaa                  >  2:653406/1‑100 (MQ=255)
                                                                                     tACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCaaaa                <  2:1758533/100‑1 (MQ=255)
                                                                                     tACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATAACCa                   >  2:2551383/1‑97 (MQ=255)
                                                                                      aCGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCAcc                    <  1:2508225/95‑1 (MQ=255)
                                                                                       cgcgTTATCCCTGCCAGACGTGGCGCGAGCGCCCTATCCGGCATACCCAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCCCCAAaata              <  1:2665525/100‑1 (MQ=255)
                                                                                        gcgTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAGATcggaagagcac             >  2:1775440/1‑90 (MQ=255)
                                                                                        gcgTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAaataa             >  2:420812/1‑100 (MQ=255)
                                                                                         cgTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAaataat            >  1:1110258/1‑100 (MQ=255)
                                                                                          gTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAatt           <  1:1662733/100‑1 (MQ=255)
                                                                                                ccTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAAtttatttt     <  1:816124/100‑1 (MQ=255)
                                                                                                 cTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAAtttatttta    >  2:1722127/1‑100 (MQ=255)
                                                                                                 cTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAAtttatttta    >  2:1394905/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TATAAGAAGTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATT  >  NC_000913/2041053‑2041251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.