BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2236534 =	NA (NA)	4 (0.040)	3/164	NT	NA	noncoding (1/150 nt)	REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences
*	?	NC_000913	2236564 =	NA (NA)	4 (0.040)	3/164	NT	NA	noncoding (31/150 nt)	REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 128 total aligned reads displayed.

GGTTGTATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCA  >  NC_000913/2236435‑2236629

ggTTGTATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg                                                                                                 <  2:544078/100‑1 (MQ=255)

ggTTGTATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg                                                                                                 <  2:544015/100‑1 (MQ=255)

 gccgcatccggcaacaggagccaaatgccggatgcagcgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGc                                                                                                <  1:1738278‑M1/2‑1 (MQ=255)

 gccgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGc                                                                                                <  2:812563‑M1/2‑1 (MQ=255)

 gTTGTATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGc                                                                                                >  1:834120/1‑100 (MQ=255)

 gTTGTATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGc                                                                                                >  1:3002176/1‑100 (MQ=255)

 gTTGTATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGc                                                                                                >  2:2590245/1‑100 (MQ=255)

  ccgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGcc                                                                                               <  1:506195‑M1/3‑1 (MQ=255)

  ccgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGcc                                                                                               >  2:1967219‑M1/98‑100 (MQ=255)

  ccgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGcc                                                                                               <  2:30664‑M1/3‑1 (MQ=255)

   tGTATTGAGCTCGGGGAAGTGAAGTTTAGGAAAGGCGAGAAAGATCGCCCGGTAACGTTGCAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCg                                                                                              <  1:1904491/100‑1 (MQ=255)

   cgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCg                                                                                              >  2:380152‑M1/97‑100 (MQ=255)

   cgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCg                                                                                              >  2:1718099‑M1/97‑100 (MQ=255)

    gTATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCgg                                                                                             >  2:506199/1‑100 (MQ=255)

     tATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGa                                                                                            <  2:428613/100‑1 (MQ=255)

     tATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGa                                                                                            >  2:132428/1‑100 (MQ=255)

     catccggcaacaggagccaaatgccggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCGGa                                                                                            >  2:1160949‑M1/95‑100 (MQ=255)

     catccggcaacaggagccaaatgccggatgcaacgcaggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCGGa                                                                                            <  2:2152070‑M1/6‑1 (MQ=255)

      aTTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGAt                                                                                           >  1:52571/1‑100 (MQ=255)

       ttGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATg                                                                                          <  1:35062/100‑1 (MQ=255)

       tccggcaacaggagccaaatgccggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCGGatn                                                                                          >  1:2948596‑M1/93‑99 (MQ=255)

         gAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCg                                                                                        <  2:2246575/100‑1 (MQ=255)

         cggcaacaggagccaaatgccggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCGGAt                                                                                           <  2:1777814‑M1/7‑1 (MQ=255)

          aGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAGCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCgg                                                                                       >  1:1750754/1‑100 (MQ=255)

          aGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCgg                                                                                       >  2:2933531/1‑100 (MQ=255)

            ctaggggAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTGACGTTGTAAAACCAGAGACGCATCAGGCATTTCGGTCCTGTCGCCGGATGCGGc                                                                                      >  1:1041943/4‑99 (MQ=255)

             tCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCtt                                                                                    <  1:1511829/100‑1 (MQ=255)

             tCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCtt                                                                                    <  2:689609/100‑1 (MQ=255)

              cGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTg                                                                                   <  2:1901257/100‑1 (MQ=255)

              cGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTg                                                                                   >  2:2020327/1‑100 (MQ=255)

              cGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAAGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTg                                                                                   >  2:1292178/1‑100 (MQ=255)

               ggggAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa                                                                                  <  2:775707/100‑1 (MQ=255)

                  gaagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg                                                                               <  2:2794558/100‑1 (MQ=255)

                   aagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc                                                                              >  1:2639606/1‑100 (MQ=255)

                    agtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGcc                                                                             >  2:665680/1‑100 (MQ=255)

                     gtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAACCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCt                                                                            >  1:1036405/1‑100 (MQ=255)

                     gtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCt                                                                            <  2:280669/100‑1 (MQ=255)

                      tgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCtt                                                                           >  1:2837832/1‑100 (MQ=255)

                           tttAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCg                                                                      >  2:867946/1‑100 (MQ=255)

                            ttAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCgg                                                                     <  2:268433/100‑1 (MQ=255)

                            ccggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCGGATGCGGCTTGAACGCCTTATCCgg                                                                     >  2:435628‑M1/72‑100 (MQ=255)

                             tAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGc                                                                    >  1:1418024/1‑100 (MQ=255)

                             tAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGc                                                                    <  2:2884297/100‑1 (MQ=255)

                              ggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCGGATGCGGCTTGAACGCCTTATCCGGcc                                                                   >  2:559515‑M1/70‑100 (MQ=255)

                              ggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCGGATGCGGCTTGAACGCCTTATCCGGcc                                                                   >  1:466184‑M1/70‑100 (MQ=255)

                              aaGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGcc                                                                   >  1:640517/1‑100 (MQ=255)

                              aaGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGcc                                                                   <  1:2294815/100‑1 (MQ=255)

                               aGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt                                                                  >  1:875497/1‑100 (MQ=255)

                               aGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt                                                                  <  1:462918/100‑1 (MQ=255)

                               aGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt                                                                  >  1:407834/1‑100 (MQ=255)

                                gAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTa                                                                 >  1:2286363/1‑100 (MQ=255)

                                 aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTAc                                                                >  2:819494/1‑100 (MQ=255)

                                  aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACa                                                               <  2:2314818/100‑1 (MQ=255)

                                    ggCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa                                                             >  2:367359/1‑100 (MQ=255)

                                      cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc                                                           <  1:1563054/100‑1 (MQ=255)

                                      cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc                                                           >  1:30216/1‑100 (MQ=255)

                                      cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc                                                           <  2:1887046/100‑1 (MQ=255)

                                      cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc                                                           <  2:709894/100‑1 (MQ=255)

                                           aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc                                                      <  2:1653075/100‑1 (MQ=255)

                                           aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc                                                      <  1:148991/100‑1 (MQ=255)

                                            agaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACa                                                     <  2:1001936/100‑1 (MQ=255)

                                              aaCAGCCGTTAACGTTCTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCTCCGGAGGCGGCTTGAACGCTTTATCCGGCCTACAAAAcc                                                          <  1:73414/93‑1 (MQ=21)

                                              aaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa                                                   >  1:2047910/1‑100 (MQ=255)

                                                  cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCa                                                >  1:2139404/1‑99 (MQ=255)

                                                  cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg                                               >  1:1123181/1‑100 (MQ=255)

                                                  cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg                                               <  2:2744126/100‑1 (MQ=255)

                                                    cGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTa                                             >  1:2833364/1‑100 (MQ=255)

                                                         aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTg                                        <  1:2590230/100‑1 (MQ=255)

                                                         aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTg                                        <  2:2895293/100‑1 (MQ=255)

                                                          cGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGa                                       >  1:1313834/1‑100 (MQ=255)

                                                           gTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACTAATCAGTATGTTGAg                                      >  2:3017760/1‑100 (MQ=255)

                                                            ttGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc                                     <  1:276788/100‑1 (MQ=255)

                                                            ttGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc                                     <  2:1145608/100‑1 (MQ=255)

                                                              gTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc                                     >  1:988291/1‑98 (MQ=255)

                                                              gTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCtt                                   >  2:216729/1‑100 (MQ=255)

                                                               tAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCtt                                   >  1:363576/1‑99 (MQ=255)

                                                                 aaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCGTAtt                                >  1:3020024/1‑100 (MQ=255)

                                                                  aagctcaacatactgatttgtatggttttgtagGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTg                               >  2:917945‑M1/34‑100 (MQ=255)

                                                                     cAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAg                            <  1:778086/100‑1 (MQ=255)

                                                                     cAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAg                            <  2:834125/100‑1 (MQ=255)

                                                                      agagACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAgg                           <  1:20933/100‑1 (MQ=255)

                                                                       gagaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGc                          >  2:1816219/1‑100 (MQ=255)

                                                                        agaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGcc                         <  2:2286376/100‑1 (MQ=255)

                                                                           cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGa                      >  2:2602545/1‑100 (MQ=255)

                                                                            gCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGAt                     <  2:1565651/100‑1 (MQ=255)

                                                                            gCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGAt                     <  2:2094625/100‑1 (MQ=255)

                                                                              aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATaa                   >  1:2652820/1‑100 (MQ=255)

                                                                                   gCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAcgc              >  2:1033058/1‑100 (MQ=255)

                                                                                      tttGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGcc           <  2:879449/100‑1 (MQ=255)

                                                                                            tCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGtt     >  1:1096505/1‑100 (MQ=255)

                                                                                             ccTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAACACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTg    <  2:1036411/100‑1 (MQ=255)

                                                                                             ccTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTg    <  1:1952535/100‑1 (MQ=255)

                                                                                             ccTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTg    >  1:388543/1‑100 (MQ=255)

                                                                                              cTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGc   >  2:423724/1‑100 (MQ=255)

                                                                                              cTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGc   <  2:2837849/100‑1 (MQ=255)

                                                                                               tGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGtt     >  1:931581/1‑97 (MQ=255)

                                                                                               tGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCa  >  2:2862132/1‑100 (MQ=255)

                                                                                               tGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCa  <  1:3029499/100‑1 (MQ=255)

                                                                                               tGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCa  >  2:1137649/1‑100 (MQ=255)

                                                                                               tGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCa  <  2:1750764/100‑1 (MQ=255)

GGTTGTATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCA  >  NC_000913/2236435‑2236629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.