New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2236534 =NA (NA)4 (0.040) 3/164 NT NA noncoding (1/150 nt) REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 2236564 = NA (NA)noncoding (31/150 nt) REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 114 total aligned reads displayed.

AAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCG  >  NC_000913/2236465‑2236662
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ggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCGGATGCGGCTTGAACGCCTTATCCGGcc                                                                                                    >  1:466184‑M1/70‑100 (MQ=255)
ggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCGGATGCGGCTTGAACGCCTTATCCGGcc                                                                                                    >  2:559515‑M1/70‑100 (MQ=255)
aaGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGcc                                                                                                    >  1:640517/1‑100 (MQ=255)
aaGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGcc                                                                                                    <  1:2294815/100‑1 (MQ=255)
 aGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt                                                                                                   <  1:462918/100‑1 (MQ=255)
 aGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt                                                                                                   >  1:407834/1‑100 (MQ=255)
 aGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt                                                                                                   <  2:2762982/100‑1 (MQ=255)
 aGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGACATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt                                                                                                   >  1:51609/1‑100 (MQ=255)
  gAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTa                                                                                                  >  1:2286363/1‑100 (MQ=255)
   aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTAc                                                                                                 >  2:819494/1‑100 (MQ=255)
    aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACa                                                                                                <  2:2314818/100‑1 (MQ=255)
      ggCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa                                                                                              >  2:367359/1‑100 (MQ=255)
        cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc                                                                                            >  1:425417/1‑100 (MQ=255)
        cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc                                                                                            <  2:1887046/100‑1 (MQ=255)
          agaaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCa                                                                                          <  2:397281/100‑1 (MQ=255)
          agaaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCa                                                                                          <  1:2454511/100‑1 (MQ=255)
           gaaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt                                                                                         <  2:771061/100‑1 (MQ=255)
            aaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATa                                                                                        <  1:1227162/100‑1 (MQ=255)
             aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc                                                                                       <  1:148991/100‑1 (MQ=255)
              agaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACa                                                                                      <  2:1001936/100‑1 (MQ=255)
                aaCAGCCGTTAACGTTCTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCTCCGGAGGCGGCTTGAACGCTTTATCCGGCCTACAAAAcc                                                                                           <  1:73414/93‑1 (MQ=21)
                aaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa                                                                                    >  1:2047910/1‑100 (MQ=255)
                    cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg                                                                                >  1:1123181/1‑100 (MQ=255)
                    cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg                                                                                <  2:2744126/100‑1 (MQ=255)
                      cGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTa                                                                              >  1:2833364/1‑100 (MQ=255)
                           aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTg                                                                         <  2:2895293/100‑1 (MQ=255)
                           aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTg                                                                         <  2:1276042/100‑1 (MQ=255)
                           aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTg                                                                         <  1:2590230/100‑1 (MQ=255)
                            cGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGa                                                                        >  1:812558/1‑100 (MQ=255)
                            cGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGa                                                                        >  1:1313834/1‑100 (MQ=255)
                             gTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACTAATCAGTATGTTGAg                                                                       >  2:3017760/1‑100 (MQ=255)
                              ttGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc                                                                      <  1:276788/100‑1 (MQ=255)
                              ttGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc                                                                      <  2:1145608/100‑1 (MQ=255)
                              ttGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc                                                                      >  2:2846329/1‑100 (MQ=255)
                               tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCt                                                                     >  1:2795056/1‑100 (MQ=255)
                                gTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc                                                                      >  1:988291/1‑98 (MQ=255)
                                gTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCtt                                                                    >  2:216729/1‑100 (MQ=255)
                                gTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCt                                                                     <  2:1834566/99‑1 (MQ=255)
                                caataagctcaacatactgatttgtatggttttgtaggccggataaggcgttcaagccgcatccggcCTACAAAACCATACAAATCAGTATGTTGAGCtt                                                                    >  2:917945‑M2/68‑100 (MQ=255)
                                 tAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCtt                                                                    >  1:363576/1‑99 (MQ=255)
                                   aaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCGTAtt                                                                 >  1:3020024/1‑100 (MQ=255)
                                    aagctcaacatactgatttgtatggttttgtagGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTg                                                                >  2:917945‑M1/34‑100 (MQ=255)
                                      ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTTAACGTCTTATCCGGCCTTCAATACCATACAAATCAGTATGTTGAGCTTATTGTa                                                              <  1:1820133/100‑1 (MQ=25)
                                       cAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAg                                                             <  1:778086/100‑1 (MQ=255)
                                       cAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAg                                                             <  2:834125/100‑1 (MQ=255)
                                        agagACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAgg                                                            <  2:1703329/100‑1 (MQ=255)
                                        agagACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAgg                                                            <  1:20933/100‑1 (MQ=255)
                                         gagaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGc                                                           >  2:1816219/1‑100 (MQ=255)
                                          agaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGcc                                                          <  2:451448/100‑1 (MQ=255)
                                          agaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGcc                                                          <  2:2286376/100‑1 (MQ=255)
                                             cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGa                                                       >  2:2602545/1‑100 (MQ=255)
                                              gCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGAt                                                      <  2:1565651/100‑1 (MQ=255)
                                              gCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGAt                                                      <  2:2094625/100‑1 (MQ=255)
                                                     gCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAcgc                                               >  2:1033058/1‑100 (MQ=255)
                                                        tttGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGcc                                            <  2:879449/100‑1 (MQ=255)
                                                              tCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGtt                                      >  1:1096505/1‑100 (MQ=255)
                                                               ccTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAACACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTg                                     <  2:1036411/100‑1 (MQ=255)
                                                               ccTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTg                                     >  1:388543/1‑100 (MQ=255)
                                                               ccTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTg                                     <  1:1952535/100‑1 (MQ=255)
                                                                cTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGc                                    >  2:423724/1‑100 (MQ=255)
                                                                cTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGc                                    <  2:2837849/100‑1 (MQ=255)
                                                                 tGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGtt                                      >  1:931581/1‑97 (MQ=255)
                                                                 tGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCa                                   <  2:1750764/100‑1 (MQ=255)
                                                                 tGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCa                                   <  1:3029499/100‑1 (MQ=255)
                                                                 tGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCa                                   >  2:2862132/1‑100 (MQ=255)
                                                                 tGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCa                                   >  2:1137649/1‑100 (MQ=255)
                                                                    ggccggataaggcgttcaagccgcatccggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATcc                                >  2:559515‑M2/32‑100 (MQ=255)
                                                                      ccggataaggcgttcaagccgcatccggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCgg                              >  2:435628‑M2/30‑100 (MQ=255)
                                                                      CCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCgg                              <  2:1299399‑M1/100‑1 (MQ=255)
                                                                       CGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGc                             >  1:2602530‑M1/1‑100 (MQ=255)
                                                                         GATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAATATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCAt                           <  1:1697715‑M1/100‑1 (MQ=255)
                                                                              ggCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGc                      >  2:578606/1‑100 (MQ=255)
                                                                              ggCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGc                      <  2:1123187/100‑1 (MQ=255)
                                                                              ggCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAAGCGCCAGCGTTGCATCCGGCAGTTggt                      >  1:2585434/1‑99 (MQ=255)
                                                                                cTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTc                    >  1:671243/1‑100 (MQ=255)
                                                                                 ttGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTcc                   <  2:1136063/100‑1 (MQ=255)
                                                                                 ttGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTcc                   >  2:2385976/1‑100 (MQ=255)
                                                                                 ttGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTcc                   <  1:1428515/100‑1 (MQ=255)
                                                                                  tGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCt                  >  1:1160671/1‑100 (MQ=255)
                                                                                  tGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCt                  <  2:52572/100‑1 (MQ=255)
                                                                                    aaCGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGt                >  2:1332759/1‑100 (MQ=255)
                                                                                       gCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGc             <  1:2408731/100‑1 (MQ=255)
                                                                                        ccTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGcc            <  1:984287/100‑1 (MQ=255)
                                                                                        ccTTATCAGGACTACAAAACGGTACAAATCAGTATGTTGAGCTTATTGTAAGCCGGATAAAAAGCGCCATCCTTGCATCCGGCCTTTGGCTCCTGtcg              >  1:2834346/1‑96 (MQ=255)
                                                                                         cTTATCCGGCCTACAAAACCATCCAAATCAGGATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCg           <  1:2062325/100‑1 (MQ=255)
                                                                                         cTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCg           <  2:3002195/100‑1 (MQ=255)
                                                                                           tATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGa         >  1:2944885/1‑100 (MQ=255)
                                                                                           natccggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGa         >  1:2948596‑M2/9‑100 (MQ=255)
                                                                                            atccggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCg           <  2:1777814‑M2/90‑1 (MQ=255)
                                                                                             tccggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCTGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATg       <  2:2152070‑M2/94‑1 (MQ=255)
                                                                                             tccggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATg       >  2:1160949‑M2/7‑100 (MQ=255)
                                                                                             tccggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATg       <  2:3007416‑M2/94‑1 (MQ=255)
                                                                                               cggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcg     >  2:380152‑M2/5‑100 (MQ=255)
                                                                                               cggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcg     >  2:1718099‑M2/5‑100 (MQ=255)
                                                                                                ggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcgg    <  2:30664‑M2/97‑1 (MQ=255)
                                                                                                ggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcgg    <  1:506195‑M2/97‑1 (MQ=255)
                                                                                                 gcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcggc   <  2:812563‑M2/98‑1 (MQ=255)
                                                                                                 gcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTCGCCGGATgcggc   <  2:2011395‑M2/98‑1 (MQ=255)
                                                                                                 gcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGCTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcggc   <  1:1738278‑M2/98‑1 (MQ=255)
                                                                                                   cTATAATACCATACAAATCAGTATGTGGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcggcg  <  1:1186362/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
AAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCG  >  NC_000913/2236465‑2236662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.