New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2835067 =NA (NA)12 (0.120) 7/164 NT NA noncoding (1/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2835099 = NA (NA)noncoding (33/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 150 total aligned reads displayed.

GACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAA  >  NC_000913/2834968‑2835166
                                                                                                   |                                                                                                   
ctccAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATg                                                                                                     <  1:2474641/98‑1 (MQ=255)
agcgggtgaagtccagaacggataaaacgtgttgcatttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagg                                                                                                     >  2:855463‑M1/100‑100 (MQ=255)
  cgggtgaagtccagaacggataaaacgtgttgcatttggacaccattgccggatgcggcgtaaacgccatatccggcctacacatgcgtccccgtagGTc                                                                                                   >  2:2056834‑M1/98‑100 (MQ=255)
  ccAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTc                                                                                                   >  1:1050444/1‑100 (MQ=255)
   gggtgaagtccagaacggataaaacgtgttgcatttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCg                                                                                                  >  2:650712‑M1/97‑100 (MQ=255)
   cAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCg                                                                                                  <  1:1356053/100‑1 (MQ=255)
   cAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCg                                                                                                  <  2:1157236/100‑1 (MQ=255)
     gCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATATCGGa                                                                                                >  1:2611656/1‑100 (MQ=255)
      tgaagtccagaacggataaaacgtgttgcatttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGAt                                                                                               >  2:1319514‑M1/94‑100 (MQ=255)
      tgaagtccagaacggataaaacgtgttgcatttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGAt                                                                                               >  1:1677950‑M1/94‑100 (MQ=255)
      cTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGAt                                                                                               >  2:698635/1‑100 (MQ=255)
       ttCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATg                                                                                              <  1:1658058/100‑1 (MQ=255)
         cgcgCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCg                                                                                            <  1:1411554/100‑1 (MQ=255)
           cgcCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGAc                                                                                          >  2:2718223/1‑100 (MQ=255)
                 tgtgGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGgc                                                                                    >  1:1043406/1‑100 (MQ=255)
                  gtgGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGgcg                                                                                   <  2:2315476/100‑1 (MQ=255)
                  cggataaaacgtgttgcatttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGgcg                                                                                   >  2:2740177‑M1/82‑100 (MQ=255)
                    gataaaacgtgttgcatttggacaccattgccggatgcggcgtaaacgccttatacggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGcgcg                                                                                 >  2:1762325‑M1/80‑100 (MQ=255)
                      tCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTc                                                                               >  2:2953102/1‑100 (MQ=255)
                       cAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCt                                                                              >  1:426115/1‑100 (MQ=255)
                       cAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCt                                                                              >  2:515260/1‑100 (MQ=255)
                         gTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTa                                                                            <  2:111787/100‑1 (MQ=255)
                         gTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGAAGGTGGGCGACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTa                                                                            >  1:1252420/1‑100 (MQ=255)
                          tGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGTCTACTGTGCCTAAAATGTCGGATGCGACGCTGGcgcg                                                                                 <  1:1085787/94‑1 (MQ=255)
                           gAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATc                                                                          <  2:1083443/100‑1 (MQ=255)
                            gtgttgcatttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATcc                                                                         >  1:194421‑M1/72‑100 (MQ=255)
                            gtgttgcatttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATcc                                                                         >  2:1729843‑M1/72‑100 (MQ=255)
                            aGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATcc                                                                         <  1:2446605/100‑1 (MQ=255)
                             ggATCGGATGAAAGAGGCATTTGGATTGTTGAAGACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCg                                                                        >  2:902809/1‑100 (MQ=255)
                             ggATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCg                                                                        <  2:1822017/100‑1 (MQ=255)
                               aTCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGAc                                                                      <  2:1420975/100‑1 (MQ=255)
                               aTCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGAc                                                                      <  2:1037111/100‑1 (MQ=255)
                                  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                   >  2:1621167/1‑100 (MQ=255)
                                     ttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgg                                                                >  2:103517‑M1/63‑100 (MQ=255)
                                     tGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgg                                                                >  2:2602061/1‑100 (MQ=255)
                                      gAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACggg                                                               >  1:2182451/1‑100 (MQ=255)
                                      gAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACggg                                                               >  2:253444/1‑100 (MQ=255)
                                       tgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACgggg                                                              >  1:1148096‑M1/61‑100 (MQ=255)
                                       aaaGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgggg                                                              >  1:532772/1‑100 (MQ=255)
                                       aaaGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgggg                                                              >  1:905357/1‑100 (MQ=255)
                                         agagGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGAc                                                            >  1:2537465/1‑100 (MQ=255)
                                          gccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGggagc                                                           >  2:2289361‑M1/58‑98 (MQ=255)
                                          gagGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACg                                                           <  2:2486244/100‑1 (MQ=255)
                                           agGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGc                                                          <  2:2861141/100‑1 (MQ=255)
                                              cATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                       >  1:1138110/1‑100 (MQ=255)
                                                 ttGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCAACCTACGGGGACGCATgtgt                                                    <  2:2563098/100‑1 (MQ=255)
                                                  tGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTa                                                   >  2:545160/1‑100 (MQ=255)
                                                    gATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGg                                                 <  1:1287574‑M1/100‑2 (MQ=255)
                                                     aTTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgc                                                >  2:2801627‑M1/1‑98 (MQ=255)
                                                      ttgttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgcc                                               <  2:1426899‑M1/100‑4 (MQ=255)
                                                        gcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCgg                                             >  1:3023064‑M1/44‑100 (MQ=255)
                                                         ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTCTCCGACCTACGGGGACGCATCTGTAGgccgga                                            >  1:3045439‑M1/1‑94 (MQ=255)
                                                         ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgga                                            <  1:2082752‑M1/100‑7 (MQ=255)
                                                          tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggat                                           >  2:2352498‑M1/1‑93 (MQ=255)
                                                           gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATa                                          >  2:2034227/1‑100 (MQ=255)
                                                                cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                     >  2:2168428/1‑100 (MQ=255)
                                                                   tGCCGATGTAGGTGGGCTACTGCGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGttt                                  <  2:2125204/100‑1 (MQ=255)
                                                                    gCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTa                                 >  1:2796883/1‑100 (MQ=255)
                                                                    gCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTa                                 >  1:188803/1‑100 (MQ=255)
                                                                      cGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcg                               <  1:428163/100‑1 (MQ=255)
                                                                        aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                             >  2:291854/1‑100 (MQ=255)
                                                                        aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                             <  1:2671860/100‑1 (MQ=255)
                                                                           tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                          >  1:2969418‑M2/1‑100 (MQ=255)
                                                                            aGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCAT                         <  2:275936‑M2/100‑1 (MQ=255)
                                                                              gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatcc                       <  1:2718207‑M1/100‑28 (MQ=255)
                                                                              gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCC                       <  1:1044568‑M2/100‑1 (MQ=255)
                                                                               tGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCG                      <  1:1559796‑M2/100‑1 (MQ=255)
                                                                               tGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCCTTTACGCCGCATCCG                      <  2:3013073‑M2/100‑1 (MQ=255)
                                                                                gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGG                     >  1:844764‑M2/1‑100 (MQ=255)
                                                                                gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGG                     <  1:2774190‑M2/100‑1 (MQ=255)
                                                                                 ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                    <  2:272009‑M2/100‑1 (MQ=255)
                                                                                 ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                    >  2:2445289‑M2/1‑100 (MQ=255)
                                                                                  gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcc                   <  2:606695‑M1/100‑32 (MQ=255)
                                                                                  gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                   >  1:506146/1‑100 (MQ=255)
                                                                                   cTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcct                  <  1:918733‑M1/100‑33 (MQ=255)
                                                                                     aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                <  1:2741349/100‑1 (MQ=255)
                                                                                     aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                >  2:1815772/1‑100 (MQ=255)
                                                                                      cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCTGCAATgg               <  2:1609156/100‑1 (MQ=255)
                                                                                        gtgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg             <  2:905362/100‑1 (MQ=255)
                                                                                        gtgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg             >  1:648585/1‑100 (MQ=255)
                                                                                         tgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtgt            <  1:2517624/100‑1 (MQ=255)
                                                                                          gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc           >  1:2021810/1‑100 (MQ=255)
                                                                                          gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc           >  2:801410/1‑100 (MQ=255)
                                                                                          gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc           >  2:3000911/1‑100 (MQ=255)
                                                                                           ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc          <  1:1525720/100‑1 (MQ=255)
                                                                                           ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc          >  1:725676/1‑100 (MQ=255)
                                                                                           ccTAAAATGTCGGATGCGACGCTAGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGGGTGTcc          >  2:1126106/1‑100 (MQ=255)
                                                                                            cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGAGCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCAGCATCCGGCAATGgtgcaca         >  1:1878176/1‑96 (MQ=255)
                                                                                            cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa         <  1:2931983/100‑1 (MQ=255)
                                                                                            cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa         >  2:2152219/1‑100 (MQ=255)
                                                                                             tAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaa        >  2:1373327/1‑100 (MQ=255)
                                                                                              aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa       >  1:246461/1‑100 (MQ=255)
                                                                                              aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa       >  2:2334626/1‑100 (MQ=255)
                                                                                                aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg     <  1:615621/100‑1 (MQ=255)
                                                                                                aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg     <  1:2427016/100‑1 (MQ=255)
                                                                                                 aTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGc    <  2:208389/100‑1 (MQ=255)
                                                                                                  tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGTGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa   <  2:2120099/100‑1 (MQ=255)
                                                                                                  tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa   >  2:1923609/1‑100 (MQ=255)
                                                                                                  tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa   >  2:2197390/1‑100 (MQ=255)
                                                                                                  tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa   <  2:856565/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAA  >  NC_000913/2834968‑2835166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.