New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2835067 =NA (NA)12 (0.120) 7/164 NT NA noncoding (1/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2835099 = NA (NA)noncoding (33/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 162 total aligned reads displayed.

GGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTA  >  NC_000913/2835002‑2835198
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ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                    >  2:1621167/1‑100 (MQ=255)
   ttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgg                                                                                                 >  2:103517‑M1/63‑100 (MQ=255)
     tgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACgggg                                                                                               >  1:1148096‑M1/61‑100 (MQ=255)
     ggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgggg                                                                                               >  1:1510078‑M1/61‑100 (MQ=255)
       agagGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑c                                                                                            >  1:2537465/1‑100 (MQ=255)
        gccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGggagc                                                                                            >  2:2289361‑M1/58‑98 (MQ=255)
        gagGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑Cg                                                                                           <  2:2486244/100‑1 (MQ=255)
            cATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCAtg                                                                                       >  1:1136370/1‑100 (MQ=255)
               ttGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCAACCTACGGGGA‑CGCATgtgt                                                                                    <  2:2563098/100‑1 (MQ=255)
                tGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTa                                                                                   >  2:545160/1‑100 (MQ=255)
                  gATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGg                                                                                 <  1:1287574‑M1/100‑2 (MQ=255)
                  gATTGTTGAAAACATGGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGg                                                                                 <  1:1287588‑M1/100‑2 (MQ=255)
                   aTTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGgc                                                                                >  2:2801627‑M1/1‑98 (MQ=255)
                    ttgttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGgcc                                                                               <  2:1426899‑M1/100‑4 (MQ=255)
                      gcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCgg                                                                             >  1:3023064‑M1/44‑100 (MQ=255)
                       ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTCTCCGACCTACGGGGA‑CGCATCTGTAGgccgga                                                                            >  1:3045439‑M1/1‑94 (MQ=255)
                       ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGgccgga                                                                            <  1:2082752‑M1/100‑7 (MQ=255)
                       ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGgccgga                                                                            <  2:396504‑M1/100‑7 (MQ=255)
                        tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGgccggat                                                                           >  2:2352498‑M1/1‑93 (MQ=255)
                        tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGgccggat                                                                           >  1:2994398‑M1/1‑93 (MQ=255)
                        tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGgccggat                                                                           >  2:1122098‑M1/1‑93 (MQ=255)
                              cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCg                                                                     <  2:2050277/100‑1 (MQ=255)
                              cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCg                                                                     <  1:2863301/100‑1 (MQ=255)
                                 tGCCGATGTAGGTGGGCTACTGCGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGttt                                                                  <  2:2125204/100‑1 (MQ=255)
                                  gCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTa                                                                 >  1:188803/1‑100 (MQ=255)
                                    cGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTAcg                                                               <  1:428163/100‑1 (MQ=255)
                                      aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                             <  1:2671860/100‑1 (MQ=255)
                                         tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                                                          >  1:2969418‑M2/1‑100 (MQ=255)
                                         tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                                                          >  2:572923‑M2/1‑100 (MQ=255)
                                         tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGAATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                                                          <  1:849157‑M2/100‑1 (MQ=255)
                                          aGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCAT                                                         <  2:275936‑M2/100‑1 (MQ=255)
                                            gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGgccggatgcggcgtaaacgccttatcc                                                       <  1:2718207‑M1/100‑28 (MQ=255)
                                            gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCC                                                       <  1:1044568‑M2/100‑1 (MQ=255)
                                              gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGG                                                     <  1:2774190‑M2/100‑1 (MQ=255)
                                               ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                    >  2:2186143‑M2/1‑100 (MQ=255)
                                               ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                    >  2:2445289‑M2/1‑100 (MQ=255)
                                                gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                   >  1:506146/1‑100 (MQ=255)
                                                 cTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGgccggatgcggcgtaaacgccttatccggcct                                                  <  1:918733‑M1/100‑33 (MQ=255)
                                                   aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                <  1:2741349/100‑1 (MQ=255)
                                                    cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCTGCAATgg                                               <  2:1609156/100‑1 (MQ=255)
                                                      gtgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                             <  2:905362/100‑1 (MQ=255)
                                                      gctccccgtaggtcggataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATccggcaccggc                                              >  2:2289361‑M2/44‑95 (MQ=255)
                                                       tgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtgt                                            >  2:2102397/1‑100 (MQ=255)
                                                        gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  2:801410/1‑100 (MQ=255)
                                                        gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  1:2021810/1‑100 (MQ=255)
                                                        gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  2:3000911/1‑100 (MQ=255)
                                                         ccccgtaggtcggataagacgcgccagcgtcgcatccgacCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                          >  1:1510078‑M2/41‑100 (MQ=255)
                                                         ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                          >  1:725676/1‑100 (MQ=255)
                                                          cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGAGCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCAGCATCCGGCAATGgtgcaca                                         >  1:1878176/1‑96 (MQ=255)
                                                          cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                         >  2:2152219/1‑100 (MQ=255)
                                                           tAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaa                                        >  2:1373327/1‑100 (MQ=255)
                                                           ccgtaggtcggataagacgcgccagcgtcgcatccgacATACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaa                                        >  2:103517‑M2/39‑100 (MQ=255)
                                                            aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                                       >  2:2334626/1‑100 (MQ=255)
                                                            aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                                       >  1:246461/1‑100 (MQ=255)
                                                              aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg                                     >  2:291696/1‑100 (MQ=255)
                                                              aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg                                     <  1:2427016/100‑1 (MQ=255)
                                                              aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg                                     <  1:615621/100‑1 (MQ=255)
                                                                tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGTGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                   <  2:2120099/100‑1 (MQ=255)
                                                                 GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCaa                                  <  1:1655750‑M1/100‑1 (MQ=255)
                                                                    ggataagacgcgccagcgtcgcatccgacCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               >  2:1729843‑M2/30‑100 (MQ=255)
                                                                    ggataagacgcgccagcgtcgcatccgacCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               >  1:194421‑M2/30‑100 (MQ=255)
                                                                    GGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               <  1:2826408‑M1/100‑1 (MQ=255)
                                                                     gataagacgcgccagcgtcgcatccgacCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACg                              >  2:1890859‑M2/29‑100 (MQ=255)
                                                                        gCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCGTGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAGTGCAACACGttt                           >  1:2163698/1‑100 (MQ=255)
                                                                        gCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                           <  2:2803777/100‑1 (MQ=255)
                                                                         cGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                          >  2:1803704/1‑100 (MQ=255)
                                                                         cGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                          >  2:359911/1‑100 (MQ=255)
                                                                          gACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTa                         >  2:1707267/1‑100 (MQ=255)
                                                                          gACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTa                         <  2:1138116/100‑1 (MQ=255)
                                                                          gACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTa                         <  2:1136376/100‑1 (MQ=255)
                                                                          gACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTa                         <  2:2182464/100‑1 (MQ=255)
                                                                            cgcgccagcgtcgcatccgacCTACGGGGA‑CGCATGTGTAGGCCGTATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                       >  2:1762325‑M2/22‑100 (MQ=255)
                                                                            cGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                       >  2:2657859/1‑100 (MQ=255)
                                                                            cGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                       >  1:1040165/1‑100 (MQ=255)
                                                                             gCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATcc                      <  1:1122092/100‑1 (MQ=255)
                                                                             gCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATcc                      <  1:1725122/100‑1 (MQ=255)
                                                                              cgccagcgtcgcatccgacCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                     >  2:2740177‑M2/20‑100 (MQ=255)
                                                                              cgccagcgtcgcatccgacCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                     >  2:2973807‑M2/20‑100 (MQ=255)
                                                                              cTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                     <  2:1948845/100‑1 (MQ=255)
                                                                                ggCGCGTCTTATCCGACCTACGGGGA‑CACATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGtt                   >  1:2320854/1‑100 (MQ=255)
                                                                                  cgctTCTTATCCGACCTACGGGGA‑CGCATGTGTAGgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtaggtcggataagacgcg                 <  2:242479‑M1/100‑66 (MQ=255)
                                                                                  cgcgTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCt                 >  2:377327/1‑100 (MQ=255)
                                                                                   gcgTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg                <  2:2690202/100‑1 (MQ=255)
                                                                                   gcgTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg                <  2:1790716/100‑1 (MQ=255)
                                                                                    cgTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg               <  1:689350/100‑1 (MQ=255)
                                                                                    cgTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCAGCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg               <  1:902804/100‑1 (MQ=255)
                                                                                     gTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg               >  1:1541609/1‑99 (MQ=255)
                                                                                      tCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             <  1:2455920/100‑1 (MQ=255)
                                                                                      tCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             <  1:2146118/100‑1 (MQ=255)
                                                                                      tCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             <  2:2021822/100‑1 (MQ=255)
                                                                                       cTTATCCGACCTACGGGCA‑CGCATGTGTAGGCCTGATAAGGCGTTTACGCCGCATCCGGCAATTGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             <  1:2277522/99‑1 (MQ=255)
                                                                                        ttATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACtt           >  2:275841/1‑100 (MQ=255)
                                                                                         tATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACt            <  1:1623710/98‑1 (MQ=255)
                                                                                         tATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc          <  1:545156/100‑1 (MQ=255)
                                                                                          atccgacCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCa         >  2:1319514‑M2/8‑100 (MQ=255)
                                                                                             cgacCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAccc      >  2:650712‑M2/5‑100 (MQ=255)
                                                                                             cgacCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAccc      <  1:71357‑M2/96‑1 (MQ=255)
                                                                                              gacCTACGGGGA‑CGCATGTGTAGGCCGGATATGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCg     >  2:2056834‑M2/4‑100 (MQ=255)
                                                                                               aCCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGActacacatgcgtccccgtaggtcggataagacgcgacagagtcgcatc    <  1:2585342‑M2/100‑49 (MQ=255)
                                                                                                cCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCt   >  2:855463‑M2/2‑100 (MQ=255)
                                                                                                 |                                                                                                    
GGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGA‑CGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTA  >  NC_000913/2835002‑2835198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.