New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2835067 =NA (NA)12 (0.120) 7/164 NT NA noncoding (1/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2835099 = NA (NA)noncoding (33/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 162 total aligned reads displayed.

GGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTA  >  NC_000913/2835002‑2835198
                                                                                                 |                                                                                                    
ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                    >  2:1621167/1‑100 (MQ=255)
   ttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgg                                                                                                 >  2:103517‑M1/63‑100 (MQ=255)
     tgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACgggg                                                                                               >  1:1148096‑M1/61‑100 (MQ=255)
     ggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgggg                                                                                               >  1:1510078‑M1/61‑100 (MQ=255)
       agagGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGAc                                                                                            >  1:2537465/1‑100 (MQ=255)
        gccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGggagc                                                                                            >  2:2289361‑M1/58‑98 (MQ=255)
        gagGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACg                                                                                           <  2:2486244/100‑1 (MQ=255)
            cATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                                                       >  1:1136370/1‑100 (MQ=255)
               ttGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCAACCTACGGGGACGCATgtgt                                                                                    <  2:2563098/100‑1 (MQ=255)
                tGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTa                                                                                   >  2:545160/1‑100 (MQ=255)
                  gATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGg                                                                                 <  1:1287574‑M1/100‑2 (MQ=255)
                  gATTGTTGAAAACATGGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGg                                                                                 <  1:1287588‑M1/100‑2 (MQ=255)
                   aTTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgc                                                                                >  2:2801627‑M1/1‑98 (MQ=255)
                    ttgttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgcc                                                                               <  2:1426899‑M1/100‑4 (MQ=255)
                      gcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCgg                                                                             >  1:3023064‑M1/44‑100 (MQ=255)
                       ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTCTCCGACCTACGGGGACGCATCTGTAGgccgga                                                                            >  1:3045439‑M1/1‑94 (MQ=255)
                       ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgga                                                                            <  1:2082752‑M1/100‑7 (MQ=255)
                       ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgga                                                                            <  2:396504‑M1/100‑7 (MQ=255)
                        tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggat                                                                           >  2:2352498‑M1/1‑93 (MQ=255)
                        tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggat                                                                           >  1:2994398‑M1/1‑93 (MQ=255)
                        tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggat                                                                           >  2:1122098‑M1/1‑93 (MQ=255)
                              cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                     <  2:2050277/100‑1 (MQ=255)
                              cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                     <  1:2863301/100‑1 (MQ=255)
                                 tGCCGATGTAGGTGGGCTACTGCGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGttt                                                                  <  2:2125204/100‑1 (MQ=255)
                                  gCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTa                                                                 >  1:188803/1‑100 (MQ=255)
                                    cGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcg                                                               <  1:428163/100‑1 (MQ=255)
                                      aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                             <  1:2671860/100‑1 (MQ=255)
                                         tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                                                          >  1:2969418‑M2/1‑100 (MQ=255)
                                         tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                                                          >  2:572923‑M2/1‑100 (MQ=255)
                                         tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGAATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                                                          <  1:849157‑M2/100‑1 (MQ=255)
                                          aGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCAT                                                         <  2:275936‑M2/100‑1 (MQ=255)
                                            gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatcc                                                       <  1:2718207‑M1/100‑28 (MQ=255)
                                            gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCC                                                       <  1:1044568‑M2/100‑1 (MQ=255)
                                              gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGG                                                     <  1:2774190‑M2/100‑1 (MQ=255)
                                               ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                    >  2:2186143‑M2/1‑100 (MQ=255)
                                               ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                    >  2:2445289‑M2/1‑100 (MQ=255)
                                                gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                   >  1:506146/1‑100 (MQ=255)
                                                 cTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcct                                                  <  1:918733‑M1/100‑33 (MQ=255)
                                                   aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                <  1:2741349/100‑1 (MQ=255)
                                                    cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCTGCAATgg                                               <  2:1609156/100‑1 (MQ=255)
                                                      gtgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                             <  2:905362/100‑1 (MQ=255)
                                                      gctccccgtaggtcggataagacgcgtcagcgtcgcatccgacCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATccggcaccggc                                              >  2:2289361‑M2/44‑95 (MQ=255)
                                                       tgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtgt                                            >  2:2102397/1‑100 (MQ=255)
                                                        gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  2:801410/1‑100 (MQ=255)
                                                        gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  1:2021810/1‑100 (MQ=255)
                                                        gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  2:3000911/1‑100 (MQ=255)
                                                         ccccgtaggtcggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                          >  1:1510078‑M2/41‑100 (MQ=255)
                                                         ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                          >  1:725676/1‑100 (MQ=255)
                                                          cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGAGCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCAGCATCCGGCAATGgtgcaca                                         >  1:1878176/1‑96 (MQ=255)
                                                          cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                         >  2:2152219/1‑100 (MQ=255)
                                                           tAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaa                                        >  2:1373327/1‑100 (MQ=255)
                                                           ccgtaggtcggataagacgcgccagcgtcgcatccgacATACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaa                                        >  2:103517‑M2/39‑100 (MQ=255)
                                                            aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                                       >  2:2334626/1‑100 (MQ=255)
                                                            aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                                       >  1:246461/1‑100 (MQ=255)
                                                              aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg                                     >  2:291696/1‑100 (MQ=255)
                                                              aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg                                     <  1:2427016/100‑1 (MQ=255)
                                                              aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg                                     <  1:615621/100‑1 (MQ=255)
                                                                tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGTGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                   <  2:2120099/100‑1 (MQ=255)
                                                                 GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCaa                                  <  1:1655750‑M1/100‑1 (MQ=255)
                                                                    ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               >  2:1729843‑M2/30‑100 (MQ=255)
                                                                    ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               >  1:194421‑M2/30‑100 (MQ=255)
                                                                    GGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               <  1:2826408‑M1/100‑1 (MQ=255)
                                                                     gataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACg                              >  2:1890859‑M2/29‑100 (MQ=255)
                                                                        gCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCGTGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAGTGCAACACGttt                           >  1:2163698/1‑100 (MQ=255)
                                                                        gCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                           <  2:2803777/100‑1 (MQ=255)
                                                                         cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                          >  2:1803704/1‑100 (MQ=255)
                                                                         cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                          >  2:359911/1‑100 (MQ=255)
                                                                          gACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTa                         >  2:1707267/1‑100 (MQ=255)
                                                                          gACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTa                         <  2:1138116/100‑1 (MQ=255)
                                                                          gACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTa                         <  2:1136376/100‑1 (MQ=255)
                                                                          gACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTa                         <  2:2182464/100‑1 (MQ=255)
                                                                            cgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGTATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                       >  2:1762325‑M2/22‑100 (MQ=255)
                                                                            cGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                       >  2:2657859/1‑100 (MQ=255)
                                                                            cGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                       >  1:1040165/1‑100 (MQ=255)
                                                                             gCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATcc                      <  1:1122092/100‑1 (MQ=255)
                                                                             gCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATcc                      <  1:1725122/100‑1 (MQ=255)
                                                                              cgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                     >  2:2740177‑M2/20‑100 (MQ=255)
                                                                              cgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                     >  2:2973807‑M2/20‑100 (MQ=255)
                                                                              cTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                     <  2:1948845/100‑1 (MQ=255)
                                                                                ggCGCGTCTTATCCGACCTACGGGGACACATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGtt                   >  1:2320854/1‑100 (MQ=255)
                                                                                  cgctTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtaggtcggataagacgcg                 <  2:242479‑M1/100‑66 (MQ=255)
                                                                                  cgcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCt                 >  2:377327/1‑100 (MQ=255)
                                                                                   gcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg                <  2:2690202/100‑1 (MQ=255)
                                                                                   gcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg                <  2:1790716/100‑1 (MQ=255)
                                                                                    cgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg               <  1:689350/100‑1 (MQ=255)
                                                                                    cgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCAGCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg               <  1:902804/100‑1 (MQ=255)
                                                                                     gTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg               >  1:1541609/1‑99 (MQ=255)
                                                                                      tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             <  1:2455920/100‑1 (MQ=255)
                                                                                      tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             <  1:2146118/100‑1 (MQ=255)
                                                                                      tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             <  2:2021822/100‑1 (MQ=255)
                                                                                       cTTATCCGACCTACGGGCACGCATGTGTAGGCCTGATAAGGCGTTTACGCCGCATCCGGCAATTGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             <  1:2277522/99‑1 (MQ=255)
                                                                                        ttATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACtt           >  2:275841/1‑100 (MQ=255)
                                                                                         tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACt            <  1:1623710/98‑1 (MQ=255)
                                                                                         tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc          <  1:545156/100‑1 (MQ=255)
                                                                                          atccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCa         >  2:1319514‑M2/8‑100 (MQ=255)
                                                                                             cgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAccc      >  2:650712‑M2/5‑100 (MQ=255)
                                                                                             cgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAccc      <  1:71357‑M2/96‑1 (MQ=255)
                                                                                              gacCTACGGGGACGCATGTGTAGGCCGGATATGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCg     >  2:2056834‑M2/4‑100 (MQ=255)
                                                                                               aCCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGActacacatgcgtccccgtaggtcggataagacgcgacagagtcgcatc    <  1:2585342‑M2/100‑49 (MQ=255)
                                                                                                cCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCt   >  2:855463‑M2/2‑100 (MQ=255)
                                                                                                 |                                                                                                    
GGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTA  >  NC_000913/2835002‑2835198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.