BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3114511	NA (NA)	5 (0.050)	4/164	NT	NA	noncoding (134/168 nt)	REP219 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP219 (repetitive extragenic palindromic) element; contains 3 REP sequences
*	?	NC_000913	= 3114541	NA (NA)	5 (0.050)	4/164	NT	NA	noncoding (164/168 nt)	REP219 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP219 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 159 total aligned reads displayed.

CGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGT  >  NC_000913/3114412‑3114610

 gggTGTCTGCCAGCACAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGAGTTAACCCGGTGCGCCTTATTTCATg                                                                                                    <  1:263397‑M1/100‑2 (MQ=255)

  ggTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATgc                                                                                                   <  2:2840772‑M1/100‑3 (MQ=255)

    tgtCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATgccg                                                                                                 <  2:1191982‑M1/100‑5 (MQ=255)

       cTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATgccggat                                                                                              >  2:2741801‑M1/1‑93 (MQ=255)

        tGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAACTGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATg                                                                                             >  1:1212/1‑100 (MQ=255)

         gCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATgc                                                                                            >  2:2477691/1‑100 (MQ=255)

         gCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATgc                                                                                            >  1:2245159/1‑100 (MQ=255)

         gCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATgc                                                                                            >  1:2381548/1‑100 (MQ=255)

         gCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATgc                                                                                            >  1:2381421/1‑100 (MQ=255)

          ccAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATgcg                                                                                           >  2:90402/1‑100 (MQ=255)

          ccAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATgcg                                                                                           >  2:224910/1‑100 (MQ=255)

           cAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATgcgg                                                                                          <  1:697012/100‑1 (MQ=255)

             gcgcAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATgcggcg                                                                                        <  2:489073/100‑1 (MQ=255)

               gcAAATAATCGGGGCTTTCCCGGTCTGTAGGCCCGATAGGGGGGGGCATGGGGCAAAGGTGTTAACCCGGGGCGCCTTATTTCAGGCCGGATGGGGcgcg                                                                                      <  1:170773/100‑1 (MQ=255)

               gcAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGcgcg                                                                                      <  2:2758385/100‑1 (MQ=255)

                cAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGcgcg                                                                                      >  1:1013925/1‑99 (MQ=255)

                 aaaTAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAg                                                                                    <  1:1411383/100‑1 (MQ=255)

                   ataatCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGTTGCGGCGCGAgcg                                                                                  <  2:2077447/100‑1 (MQ=255)

                     aatCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGcc                                                                                <  1:481169/100‑1 (MQ=255)

                      atCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCt                                                                               >  2:1449591/1‑100 (MQ=255)

                        cgcgGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCtt                                                                              >  2:605816/1‑99 (MQ=255)

                        cgcgGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTA                                                                             <  1:1238451‑M2/100‑1 (MQ=255)

                        cgcgGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTA                                                                             >  1:1912313‑M2/1‑100 (MQ=255)

                         gcgGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTAT                                                                            <  2:42247‑M2/100‑1 (MQ=255)

                              tttCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGC                                                                       <  2:489919‑M2/100‑1 (MQ=255)

                               ttCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATgccggataaggcgctcgcgccgcatccggca                                                                      <  1:1875651‑M1/100‑32 (MQ=255)

                               ttCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGcc                                                                      <  2:761951/100‑1 (MQ=255)

                               ttCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGcc                                                                      <  1:1299236/100‑1 (MQ=255)

                               ttCCCCGTCTGTAGGCCCGATAAGCAGGCGCAACGGGCAAATGTGTTAACCCGGTGCGCCTTGTTTCATGCCGGATGCGGCGCGGGGGCGTTATCGGGC                                                                       <  2:2902406‑M2/99‑1 (MQ=255)

                                tCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATgccggataaggcgctcgcgccgcatccggcat                                                                     <  2:2941387‑M1/100‑33 (MQ=255)

                                tCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATgccggataaggcgctcgcgccgcatccggcat                                                                     <  2:162966‑M1/100‑33 (MQ=255)

                                tCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCt                                                                     >  1:2067626/1‑100 (MQ=255)

                                 ccccGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTa                                                                    >  2:1705448/1‑100 (MQ=255)

                                  cccGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCGTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTAc                                                                   >  1:1960643/1‑100 (MQ=255)

                                  cccGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTAc                                                                   >  2:2889376/1‑100 (MQ=255)

                                   ccGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACg                                                                  >  2:2979613/1‑100 (MQ=255)

                                    cGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgg                                                                 <  1:2601827/100‑1 (MQ=255)

                                    cGTCTGTAGGCCCAATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATgccggataaggcgctcgcgccgcatccggcatgaaa                                                                 <  1:1701617‑M1/100‑37 (MQ=255)

                                     gTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACggg                                                                <  2:2381561/100‑1 (MQ=255)

                                     gTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACggg                                                                >  2:759660/1‑100 (MQ=255)

                                     gTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACggg                                                                <  2:1873389/100‑1 (MQ=255)

                                     gTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACggg                                                                <  2:2381434/100‑1 (MQ=255)

                                       cTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCt                                                              <  2:3025456/100‑1 (MQ=255)

                                       cTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCt                                                              >  1:797105/1‑100 (MQ=255)

                                        tGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCtt                                                             >  2:657204/1‑100 (MQ=255)

                                        catttgCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCtt                                                             >  2:1468985/6‑100 (MQ=255)

                                           aGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACt                                                          >  2:2528270/1‑100 (MQ=255)

                                            ggCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTc                                                         >  2:192758/1‑100 (MQ=255)

                                            ggCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGGGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTc                                                         >  1:1059876/1‑100 (MQ=255)

                                             gCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCg                                                        >  1:274627/1‑100 (MQ=255)

                                              cccGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCgg                                                       <  2:2093599/100‑1 (MQ=255)

                                               ccGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGc                                                      <  2:2199152/100‑1 (MQ=255)

                                               ccGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGc                                                      >  1:1336341/1‑100 (MQ=255)

                                                cGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCa                                                     <  1:1484278/100‑1 (MQ=255)

                                                cGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCa                                                     <  2:1178256/100‑1 (MQ=255)

                                                cGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCa                                                     <  1:290632/100‑1 (MQ=255)

                                                 gctAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCGTACTCGGCat                                                    <  1:2091537/98‑2 (MQ=255)

                                                     aGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACAt                                                >  2:763178/1‑100 (MQ=255)

                                                     aGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACAt                                                >  2:2216706/1‑100 (MQ=255)

                                                      gCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATc                                               <  2:378979/100‑1 (MQ=255)

                                                      gCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATc                                               >  1:2207477/1‑100 (MQ=255)

                                                        aGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGTTTACTCGGCAGACATCtt                                             <  1:891083/100‑1 (MQ=255)

                                                         ggCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCtt                                             >  1:2765005/1‑99 (MQ=255)

                                                         ggCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTa                                            >  2:2464378/1‑100 (MQ=255)

                                                         ggCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTa                                            <  1:12615/100‑1 (MQ=255)

                                                         ggCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTa                                            >  1:159834/1‑100 (MQ=255)

                                                         ggCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTa                                            <  2:2760989/100‑1 (MQ=255)

                                                         ggCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTa                                            <  1:1158448/100‑1 (MQ=255)

                                                         ggCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTa                                            <  1:1150337/100‑1 (MQ=255)

                                                         ggCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTa                                            >  1:2611761/1‑100 (MQ=255)

                                                            gcATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATg                                          <  1:1834140/99‑1 (MQ=255)

                                                             cATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTCTCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCt                                        <  1:605812/100‑1 (MQ=255)

                                                              aTCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTAACCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTc                                       <  1:1644856/100‑1 (MQ=255)

                                                                  ggCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTa                                   >  1:1964637/1‑100 (MQ=255)

                                                                     aaaTGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAAcc                                <  2:2172913/100‑1 (MQ=255)

                                                                       aTGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTg                              >  2:2479245/1‑100 (MQ=255)

                                                                        tgttTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGa                             <  2:587282/100‑1 (MQ=255)

                                                                        tgtgTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGa                             >  2:2264740/1‑100 (MQ=255)

                                                                        tgtgTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGa                             <  2:384971/100‑1 (MQ=255)

                                                                         gtgtTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGAt                            <  1:382237/100‑1 (MQ=255)

                                                                          tgtTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGAtn                           <  1:224908/100‑2 (MQ=255)

                                                                             tAACCCGGTGCGCCTTATTTCATGCCGGATGCTGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAAt                        <  2:750493/100‑1 (MQ=255)

                                                                             tAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAAt                        >  1:656286/1‑100 (MQ=255)

                                                                              aaCCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATg                       <  1:1579643/100‑1 (MQ=255)

                                                                               aCCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATgg                      <  1:2507658/100‑1 (MQ=255)

                                                                                 ccGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGtt                    >  2:1162910/1‑100 (MQ=255)

                                                                                   ggTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTc                  <  2:2516090/100‑1 (MQ=255)

                                                                                    gTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTcc                 <  1:2528256/100‑1 (MQ=255)

                                                                                    gTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTcc                 <  1:1906683/100‑1 (MQ=255)

                                                                                    gTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTcc                 <  1:1922913/100‑1 (MQ=255)

                                                                                     tGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTACCCTGATTAATGGTTTcc                 <  1:3036645/99‑1 (MQ=255)

                                                                                        gcCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTc             <  1:90401/100‑1 (MQ=255)

                                                                                         ccTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTcc            <  2:3024286/100‑1 (MQ=255)

                                                                                         ccTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTcc            <  1:2759438/100‑1 (MQ=255)

                                                                                          cTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTccc           <  1:1463367/100‑1 (MQ=255)

                                                                                          cTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTccc           <  1:2982825/100‑1 (MQ=255)

                                                                                          cTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTccc           >  1:180480/1‑100 (MQ=255)

                                                                                                tCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCatgaaataaggcgcaccggggtaacacatttgcccgatgcgcctgcttatcgggcctacagacg       <  1:1756234‑M2/98‑65 (MQ=255)

                                                                                                  aTGCCGGATGCGGCGCGAGCGCCTTATCCGGCatgaaataaggcgcaccgggttaacacatttgcccgatgcgcctgcttatcgggcctacagacgggga   <  2:162966‑M2/100‑69 (MQ=255)

                                                                                                   tgccggatgcggcgcgagcgccttatccggcatgaaataaggcgcaccgggttaacacatttgcccgatgcgcctgcttatcgggcctacagacggggaa  >  1:608837‑M1/1‑1 (MQ=255)

CGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGT  >  NC_000913/3114412‑3114610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.