New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3493758 =NA (NA)4 (0.040) 4/162 NT NA noncoding (1/26 nt) REP248 (repetitive extragenic palindromic) element; contains 1 REP sequences REP248 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3493784 = NA (NA)intergenic (+35/‑227) tsgA/nirB putative transporter/nitrite reductase, large subunit, NAD(P)H‑binding

Only 100 of 143 total aligned reads displayed.

TGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACAATTCCGTGACTT  >  NC_000913/3493685‑3493883
                                                                                                   |                                                                                                   
tgATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGcc                                                                                                     >  2:788001/1‑100 (MQ=255)
 tttgtgcaaaaaatagacaaaatgagcgggtttatagaaatagatgcacgtagcgggggaagagaggaaaagGCCGGACGGCACTATCGTCGTCCGGCCt                                                                                                    >  2:550802‑M1/73‑100 (MQ=255)
   tgtgCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCttt                                                                                                  >  1:1566733/1‑100 (MQ=255)
    gtgcaaaaaatagacaaaatgagcgggtttatagaaatagatgcacgtagcgggggaagagaggaaaagGCCGGACGGCACTATCGTCGTCCGGCCtttt                                                                                                 >  2:2883839‑M1/70‑100 (MQ=255)
    gtgCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCttt                                                                                                  <  1:2464098/99‑1 (MQ=255)
     tgCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTc                                                                                                <  1:1450344/100‑1 (MQ=255)
      gCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTcc                                                                                               >  1:382604/1‑100 (MQ=255)
      gCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTcc                                                                                               <  1:860457/100‑1 (MQ=255)
      gCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTcc                                                                                               >  2:1661/1‑100 (MQ=255)
        aaaaaatagacaaaatgagcgggtttatagaaatagatgcacgtagcgggggaagagaggaaaagGCCGGACGGCACTATCGTCGTCCGGCCTTTTCctc                                                                                             >  1:998589‑M1/66‑100 (MQ=255)
         tCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCGTTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCctct                                                                                            >  1:2566912/1‑100 (MQ=255)
         tCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCctct                                                                                            >  2:2760952/1‑100 (MQ=255)
           cTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCctctct                                                                                          >  2:1860677/1‑100 (MQ=255)
           cTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCctctct                                                                                          <  1:2533246/100‑1 (MQ=255)
             gTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTc                                                                                        <  2:468797/100‑1 (MQ=255)
             gTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTc                                                                                        >  1:2784405/1‑100 (MQ=255)
              ttAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTcc                                                                                       >  1:2919923/1‑100 (MQ=255)
               tAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTccc                                                                                      >  2:582595/1‑100 (MQ=255)
                 ggTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTccccc                                                                                    >  1:1650872/1‑100 (MQ=255)
                 ggTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTcccc                                                                                     <  1:1939043/99‑1 (MQ=255)
                  gTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCg                                                                                   <  2:715713/100‑1 (MQ=255)
                  gTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCg                                                                                   >  2:1758271/1‑100 (MQ=255)
                  gTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCg                                                                                   >  2:2939348/1‑100 (MQ=255)
                    ttCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCt                                                                                 <  1:2274456/100‑1 (MQ=255)
                    ttCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCt                                                                                 >  2:1339218/1‑100 (MQ=255)
                      cGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTCCTCTCTTCCCCCGCTACg                                                                              >  2:1138638/1‑100 (MQ=255)
                       gTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTAc                                                                               >  2:1076624/1‑99 (MQ=255)
                       gTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACg                                                                              >  2:2492854/1‑100 (MQ=255)
                       gTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACg                                                                              >  1:1896766/1‑100 (MQ=255)
                       gTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACg                                                                              >  2:580523/1‑100 (MQ=255)
                       gTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACg                                                                              >  2:1908543/1‑100 (MQ=255)
                         cAGCCGTCACCGTCAGCATAACACCCTTACCTCTCATTAATTTCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTa                                                                                >  1:276412/1‑96 (MQ=255)
                         cAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTg                                                                            <  2:2141383/100‑1 (MQ=255)
                           gCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGc                                                                           >  1:1189174/1‑99 (MQ=255)
                           gCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCa                                                                          <  2:867108/100‑1 (MQ=255)
                           gCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCa                                                                          >  2:1382061/1‑100 (MQ=255)
                            ccgtcaccgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCAt                                                                         <  1:1011975/100‑1 (MQ=255)
                            ccgtcaccgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCAt                                                                         <  1:951681/100‑1 (MQ=255)
                             cgtcaccgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATc                                                                        <  1:503740/100‑1 (MQ=255)
                                  ccgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTAttt                                                                   >  2:1705763/1‑100 (MQ=255)
                                   cgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTc                                                                  <  2:913740/100‑1 (MQ=255)
                                   cgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTc                                                                  <  1:623432/100‑1 (MQ=255)
                                     tcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCta                                                                <  2:2089962/100‑1 (MQ=255)
                                     tcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCta                                                                <  2:1761989/100‑1 (MQ=255)
                                       aGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCTTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCtata                                                              <  1:2477787/100‑1 (MQ=255)
                                        gCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATaa                                                             >  1:1425244/1‑100 (MQ=255)
                                           tAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAAcc                                                          >  1:2186222/1‑100 (MQ=255)
                                           tAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAAcc                                                          >  1:1707744/1‑100 (MQ=255)
                                           tAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAAcc                                                          >  2:2383727/1‑100 (MQ=255)
                                           tAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGACCTTTTCCTCTCTTCCGCCGCTACGTGCATCTATTTCTATAAAcc                                                          >  1:2951635/1‑100 (MQ=255)
                                             acacCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCg                                                        >  2:189828/1‑100 (MQ=255)
                                              cacCCTGTCCTCTCATTAAGTTCTCATGCCGTACGGCACTATCGTCGTCCGGCCTTTTCCTCGCGTCCCCCGCTACGTTCATCTATTTCTATAAAcc                                                          <  1:2692260/97‑1 (MQ=255)
                                                   tGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCAtt                                                  >  2:2469124/1‑100 (MQ=255)
                                                      ccTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTg                                               <  1:785747/100‑1 (MQ=255)
                                                      ccTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTg                                               <  2:885604/100‑1 (MQ=255)
                                                       ctctCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGt                                              >  2:32875/1‑100 (MQ=255)
                                                        tctcATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTc                                             >  1:963703/1‑100 (MQ=255)
                                                        tctcATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTc                                             <  1:1327802/100‑1 (MQ=255)
                                                        tctcATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTc                                             <  1:775955/100‑1 (MQ=255)
                                                        tctcATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTc                                             <  2:3004794/100‑1 (MQ=255)
                                                         ctcATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCt                                            >  2:2635090/1‑100 (MQ=255)
                                                         ctcATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCt                                            >  2:555853/1‑100 (MQ=255)
                                                         ctcATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCt                                            >  2:1995028/1‑100 (MQ=255)
                                                           cATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTTTTTTTTTTTTCCTCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTAt                                          >  1:173479/1‑100 (MQ=255)
                                                                gaggaaaaggccggacgacgatagtgccgtccggcCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTAtttttt                                     >  1:998589‑M2/36‑100 (MQ=255)
                                                                aTTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTAtttttt                                     <  2:2239043/100‑1 (MQ=255)
                                                                 ttGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTg                                    <  2:1639865/100‑1 (MQ=255)
                                                                 ttGCTCACGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTg                                    <  1:994665/100‑1 (MQ=255)
                                                                  tGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGc                                   <  1:1249168/100‑1 (MQ=255)
                                                                  tGCTCATGCCGCACGGCACTATCGTCGTCCTTCCTTTTCCTCTCTTCCCCCGTTACGTGCATCTATTTCTATTAACCCGCTCATTTTGTCTATTTTTTGc                                   <  1:767773/100‑1 (MQ=255)
                                                                   gCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGca                                  >  1:485173/1‑100 (MQ=255)
                                                                   gCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGca                                  <  2:1398905/100‑1 (MQ=255)
                                                                    cTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGcac                                 >  2:495260/1‑100 (MQ=255)
                                                                    cTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGcac                                 >  2:2626048/1‑100 (MQ=255)
                                                                    cTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGcac                                 >  2:2571600/1‑100 (MQ=255)
                                                                     tCATGCCGGACGGCACTATCGTTGTATGGTTTTTTCTTTTCTTCCCCCTTTACGTGCATCTATTTCTATAATTCTGTTCATTTTGTCTATTTTTTg                                    <  1:285528/96‑1 (MQ=255)
                                                                     tCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGcaca                                <  1:1214444/100‑1 (MQ=255)
                                                                     tCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGcaca                                <  1:2292459/100‑1 (MQ=255)
                                                                     aaaggccggacgacgatagtgccgtccggcCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTATGcaca                                >  2:398898‑M2/31‑100 (MQ=255)
                                                                        tGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAAc                             <  1:481462/100‑1 (MQ=255)
                                                                        tGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAAc                             >  1:664162/1‑100 (MQ=255)
                                                                         GCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAAc                             >  1:2584257‑M1/1‑99 (MQ=255)
                                                                          CCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACAt                           <  2:1381799‑M1/100‑1 (MQ=255)
                                                                          CCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACAt                           <  1:1791475‑M1/100‑1 (MQ=255)
                                                                            GGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGa                         <  1:904910‑M1/100‑1 (MQ=255)
                                                                             GACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGaa                        >  2:727517‑M1/1‑100 (MQ=255)
                                                                               CGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAat                      <  1:1947101‑M1/100‑1 (MQ=255)
                                                                                  cACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATc                   <  1:314824/100‑1 (MQ=255)
                                                                                     tATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGa                <  1:247981/100‑1 (MQ=255)
                                                                                      aTCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGAc               >  2:371695/1‑100 (MQ=255)
                                                                                      aTCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGAc               >  2:1274544/1‑100 (MQ=255)
                                                                                        cgtcgtCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATGAGCCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAggc               <  2:1650881/98‑3 (MQ=255)
                                                                                         gtcgtcCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACAAt            >  1:1845953/1‑100 (MQ=255)
                                                                                            gtccggcCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACAATTcc         >  2:2342510‑M2/8‑100 (MQ=255)
                                                                                            gtccggcCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACAATTcc         >  1:229720‑M2/8‑100 (MQ=255)
                                                                                              ncggcCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATAACAGACAATTCCGt       >  1:2801492‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACAATTCCGt       >  2:2185177‑M2/6‑100 (MQ=255)
                                                                                               nggcCTTTTCCTCTCTTCCCCCGCTCCGTGCCTCTATTTCTCTAAACCCGCTCATTTTGTCTATTTTTTGCACACACATGAAATATCAGACAATTCCGt       >  1:2869569‑M2/5‑99 (MQ=255)
                                                                                                  cCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACAATTCCGTGAc    <  1:1656462‑M2/98‑1 (MQ=255)
                                                                                                  cCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACAATTCCGTGACt   >  2:371758‑M2/2‑100 (MQ=255)
                                                                                                   |                                                                                                   
TGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACAATTCCGTGACTT  >  NC_000913/3493685‑3493883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.