New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3547940NA (NA)3 (0.030) 3/164 NT NA noncoding (54/87 nt) REP254 (repetitive extragenic palindromic) element; contains 2 REP sequences REP254 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 3547973 NA (NA)noncoding (87/87 nt) REP254 (repetitive extragenic palindromic) element; contains 2 REP sequences REP254 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 159 total aligned reads displayed.

GATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAG  >  NC_000913/3547874‑3548072
                                                                                                   |                                                                                                   
gATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGC                                                                                                     <  1:2737978‑M2/100‑1 (MQ=255)
gATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGC                                                                                                     <  1:656661‑M2/100‑1 (MQ=255)
 aTAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCa                                                                                                    >  2:916673/1‑100 (MQ=255)
   aaCACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATc                                                                                                  <  1:1275369/100‑1 (MQ=255)
   aaCACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATc                                                                                                  >  1:154500/1‑100 (MQ=255)
   aaCACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATc                                                                                                  >  2:1527705/1‑100 (MQ=255)
    acacTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCa                                                                                                 >  1:2378580/1‑100 (MQ=255)
       ctgactgCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAAcc                                                                                              <  1:1804957/100‑1 (MQ=255)
        tgactgCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCg                                                                                             <  2:286247/100‑1 (MQ=255)
         gactgCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAACGAGCGGCAAGCATCGCATGAGGCATCAACCGc                                                                                            >  1:720820/1‑100 (MQ=25)
          actgCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCa                                                                                           >  2:1047434/1‑100 (MQ=255)
           aggccggataaggcggtcacgccgcatccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCAc                                                                                          >  2:480848‑M2/33‑100 (MQ=255)
            ggccggataaggcggtcacgccgcatccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCAct                                                                                         >  2:568586‑M2/32‑100 (MQ=255)
             gccggataaggcggtcacgccgcatccggcCTACGATTCGGGATGAATTAGTACGCCGGATAAGCCGCGTCAAGCATCGCATCCGGCATCAACCGCActc                                                                                        >  1:691875‑M2/31‑100 (MQ=255)
             GCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCActc                                                                                        >  2:2963956‑M1/1‑100 (MQ=255)
              CCGGATGCGGCGTGACCGCCTTAGCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCActct                                                                                       >  2:1001703‑M1/1‑100 (MQ=255)
               CGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTa                                                                                      <  2:2948989‑M1/100‑1 (MQ=255)
                ggataaggcggtcacgccgcatccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTAc                                                                                     >  2:1700880‑M2/28‑100 (MQ=255)
                ggataaggcggtcacgccgcatccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTAc                                                                                     >  1:1347483‑M2/28‑100 (MQ=255)
                 GATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACt                                                                                    >  1:1695957‑M1/1‑100 (MQ=255)
                   TGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTc                                                                                  >  1:871220‑M1/1‑100 (MQ=255)
                      ggcgTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActtcttc                                                                               >  2:1066633/1‑100 (MQ=255)
                      ggcgTGAACGCCTTATCCGGCCTACGATTCGGCATTAATTAGTAGGCCGG‑TAAGACGCGTCAAGCGTCGCATCCGGCATCAACCGCACTCTActtcttct                                                                              >  2:2034643/1‑100 (MQ=37)
                          tGACCGCCTTATCCGGCCTACGATTCGGGATGTATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCg                                                                           <  1:539562/100‑1 (MQ=255)
                           gACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGc                                                                          >  1:2304946/1‑100 (MQ=255)
                            aCCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCt                                                                         <  2:1928307/100‑1 (MQ=255)
                            aCCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCt                                                                         <  2:367691/100‑1 (MQ=255)
                              cGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGc                                                                       >  1:2596814/1‑100 (MQ=255)
                                ccTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAg                                                                     >  2:1587864/1‑100 (MQ=255)
                                ccTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCAGCATCAACCGCACTCTACTTCTTCTTCGCTGCa                                                                      <  2:2888347/99‑1 (MQ=255)
                                 cTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGc                                                                    >  2:1634108/1‑100 (MQ=255)
                                 cTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCAGCAACCGCACTCTACTTCTTCTTCGCTGc                                                                       <  1:2562170/97‑1 (MQ=255)
                                 cTTATCCGGCCTACGACTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGc                                                                    <  2:2421254/100‑1 (MQ=255)
                                    atccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGctct                                                                 >  1:2342140‑M2/8‑100 (MQ=255)
                                    atccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGctct                                                                 >  1:2840957‑M2/8‑100 (MQ=255)
                                     tccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTg                                                                >  2:2509946‑M2/7‑100 (MQ=255)
                                       cggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTgcg                                                              >  1:1563142‑M2/5‑100 (MQ=255)
                                         gcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGcc                                                            <  2:222492‑M2/98‑1 (MQ=255)
                                            tACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCTGCTCTGCGCCgcc                                                         <  2:2072990/100‑3 (MQ=255)
                                            tACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTc                                                         <  2:656666/100‑1 (MQ=255)
                                            tACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTc                                                         <  1:424885/100‑1 (MQ=255)
                                            tACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTc                                                         <  1:1645100/100‑1 (MQ=255)
                                             aCGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCt                                                        >  1:35551/1‑100 (MQ=255)
                                              cGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTg                                                       >  2:585835/1‑100 (MQ=255)
                                               gATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGt                                                      <  2:2629881/100‑1 (MQ=255)
                                                 ttCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTcc                                                    <  1:298026/100‑1 (MQ=255)
                                                 ttCGGGATGAATGAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTcc                                                    <  1:2123724/100‑1 (MQ=255)
                                                  tCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCa                                                   <  1:2168325/100‑1 (MQ=255)
                                                    gggATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACTGCACTCTGCTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTcc                                                    >  2:1369810/1‑97 (MQ=255)
                                                    gggATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCaaa                                                 >  1:665904/1‑100 (MQ=255)
                                                    gggATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCaaa                                                 >  1:365749/1‑100 (MQ=255)
                                                     ggATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCaact                                                >  1:89714/1‑98 (MQ=255)
                                                     ggATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAAt                                                <  2:1183893/100‑1 (MQ=255)
                                                       aTGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAAt                                                <  2:649750/98‑1 (MQ=255)
                                                       aTGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATcc                                              >  1:1410725/1‑100 (MQ=255)
                                                        tGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCt                                             >  2:1268012/1‑100 (MQ=255)
                                                        tGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCt                                             <  2:1823440/100‑1 (MQ=255)
                                                        tGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCt                                             >  1:1394621/1‑100 (MQ=255)
                                                         gAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCtt                                            >  2:586335/1‑100 (MQ=255)
                                                          aaTTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTc                                           >  1:199017/1‑100 (MQ=255)
                                                          aaTTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTc                                           >  2:2794057/1‑100 (MQ=255)
                                                           aTTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCa                                          <  1:814907/100‑1 (MQ=255)
                                                           aTTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCa                                          >  2:2754661/1‑100 (MQ=255)
                                                             tagtagGTCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGc                                        <  1:571468/100‑1 (MQ=255)
                                                             tagtagGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGc                                        <  2:196368/100‑1 (MQ=255)
                                                                 agGCCGGATAAGACGCGTCAAGCATCGCATCCGGCctactaattcatcccgaatcgtaggccggataaggcggtcacgcagcaaccggcagtcagtgtta                                    <  1:565765‑M2/100‑66 (MQ=255)
                                                                 agGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACt                                    >  2:96513/1‑100 (MQ=255)
                                                                 agGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACt                                    <  1:2810615/100‑1 (MQ=255)
                                                                  ggCCGGATAAGACGCGTCAAGCATCGCATCCGGCctactaattcatcccgaatcgtaggccggctaaggcggtcacgccgcatccggcagtcagtgttat                                   <  1:2020861‑M2/100‑67 (MQ=255)
                                                                  ggCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACtt                                   >  1:1486985/1‑100 (MQ=255)
                                                                  ggCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACtt                                   >  1:177528/1‑100 (MQ=255)
                                                                  ggCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACtt                                   >  2:2692057/1‑100 (MQ=255)
                                                                   gCCGGATAAGACGCGTCAAGCATCGCATCCGGCctactaattcatcccgaatcgtaggccggataaggcggtcacgccgcatccggcagtcagtgttatc                                  <  1:858389‑M2/100‑68 (MQ=255)
                                                                     cGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGtt                                <  1:1012097/100‑1 (MQ=255)
                                                                     cGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGtt                                <  2:1486991/100‑1 (MQ=255)
                                                                     cGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTGCAGCAACTTGtt                                <  1:2416380/100‑1 (MQ=255)
                                                                      ggATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGTAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTc                               <  2:727495/100‑1 (MQ=255)
                                                                         tAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACg                            <  2:1597045/100‑1 (MQ=255)
                                                                         tAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACg                            <  1:22491/100‑1 (MQ=255)
                                                                          aaGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGc                           >  1:1252620/1‑100 (MQ=255)
                                                                          aaGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGc                           <  2:1871492/100‑1 (MQ=255)
                                                                           aGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGcc                          <  2:1381442/100‑1 (MQ=255)
                                                                           aGACGCGTCAAGCATCGCATCCGGCATAAACCGCAATCTACTTCTTCTTCGCTGAAGCTCTGCGCCGTATGTCCAAATCCTTCAGCAACTTGTTCACGcc                          >  2:1784125/1‑100 (MQ=255)
                                                                            gACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCca                         <  2:866361/100‑1 (MQ=255)
                                                                              cgcgTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCcatc                       <  1:2908024/100‑1 (MQ=255)
                                                                              cgcgTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCcatc                       >  2:1947821/1‑100 (MQ=255)
                                                                               gcgTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCcatca                      <  1:1092157/100‑1 (MQ=255)
                                                                                cgTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCcatcat                     <  2:2368444/100‑1 (MQ=255)
                                                                                cgTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCcatcat                     >  2:1146763/1‑100 (MQ=255)
                                                                                    aaGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGc                 <  2:2717240/100‑1 (MQ=255)
                                                                                    aaGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGc                 <  2:2378734/100‑1 (MQ=255)
                                                                                         tcgcatcCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACa            <  2:2840974/100‑1 (MQ=255)
                                                                                           gcatcCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAATTCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATc          >  1:2144203/1‑100 (MQ=255)
                                                                                           gcatcCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATc          >  2:3044803/1‑100 (MQ=255)
                                                                                           gcatcCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATc          >  1:244689/1‑100 (MQ=255)
                                                                                           gcatcCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCAACGCCGTCTGTCCAAATCCTACAGCAACTTGTTCACGCCATCATCGGCAAACagc          <  1:2130935/100‑3 (MQ=255)
                                                                                                cGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTc     >  1:1919484/1‑100 (MQ=255)
                                                                                                 ggCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACt      <  1:1051381/98‑1 (MQ=255)
                                                                                                  gCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCaa   >  1:1739117/1‑100 (MQ=255)
                                                                                                   cATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAg  >  2:3003196/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAG  >  NC_000913/3547874‑3548072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.