New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 72190NA (NA)9 (0.090) 5/164 NT NA noncoding (55/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 72220 NA (NA)noncoding (85/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 161 total aligned reads displayed.

AGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGCCCGTCGGC  >  NC_000913/72121‑72318
                                                                                                   |                                                                                                  
aGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGAC                                                                                                    <  1:2195154‑M2/100‑1 (MQ=255)
aGTCTTGTGCGGGTTGCCTGATGCGACACTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGAC                                                                                                    >  1:1410581‑M2/1‑100 (MQ=255)
   cTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCCTCCGACAGt                                                                                                 >  1:1196479/1‑100 (MQ=255)
   cTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGt                                                                                                 >  2:696040/1‑100 (MQ=255)
      gttttgtaggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCa                                                                                              >  2:1021083‑M2/43‑100 (MQ=255)
       tgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCAt                                                                                             >  2:2419424/1‑100 (MQ=255)
       tgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCAt                                                                                             <  1:3037076/100‑1 (MQ=255)
        gCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATa                                                                                            <  2:908888/100‑1 (MQ=255)
         cGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATAc                                                                                           >  1:652971/1‑100 (MQ=255)
          tgtaggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACt                                                                                          >  2:1232879‑M2/39‑100 (MQ=255)
          gggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACt                                                                                          <  2:2394226/100‑1 (MQ=255)
          gggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACt                                                                                          >  2:2927822/1‑100 (MQ=255)
           ggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTa                                                                                         <  1:22710/100‑1 (MQ=255)
             ttGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTa                                                                                         <  1:119967/98‑1 (MQ=255)
              tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAcc                                                                                      <  2:1892933/100‑1 (MQ=255)
               gcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAccc                                                                                     >  2:38345‑M2/34‑100 (MQ=255)
                CCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                                                                    <  2:2216038‑M1/100‑1 (MQ=255)
                 CTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGt                                                                                   >  2:117605‑M1/1‑100 (MQ=255)
                     TGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATc                                                                               <  2:2494133‑M1/100‑1 (MQ=255)
                        gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcccc                                                                            <  2:780193/100‑1 (MQ=255)
                        gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcccc                                                                            <  2:1918843/100‑1 (MQ=255)
                          cGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACACCGCATCCGACAGTGCATACTAACCCGTAATCCCCaa                                                                          >  1:2174294/1‑100 (MQ=255)
                           gCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAAt                                                                         <  1:109914/100‑1 (MQ=255)
                           gCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAAt                                                                         <  2:1136808/100‑1 (MQ=255)
                            cTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATa                                                                        >  2:2341869/1‑100 (MQ=255)
                                 cgcgTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGcc                                                                   <  1:768716/100‑1 (MQ=255)
                                   cgccTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGa                                                                 <  2:3040150/97‑1 (MQ=255)
                                     tCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAg                                                               <  2:1054309/100‑1 (MQ=255)
                                      gatctcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGc                                                              <  2:2040233‑M2/90‑1 (MQ=255)
                                        tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc                                                            >  2:1668911/1‑100 (MQ=255)
                                         atcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACt                                                           >  2:1902588‑M2/8‑100 (MQ=255)
                                         atcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACt                                                           <  1:3029556‑M2/93‑1 (MQ=255)
                                          tcatgcCTACAAAACCCACTACCCGTAGGCTGGATAAGGCGTTTACGCCGCATCCGACAGTTCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTc                                                          <  1:1180354‑M2/94‑1 (MQ=255)
                                           caggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGaagcagatc                                                         >  1:2040221‑M2/6‑96 (MQ=255)
                                           caggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCg                                                         >  1:2440697‑M2/6‑100 (MQ=255)
                                            aggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGc                                                        <  2:457581‑M2/96‑1 (MQ=255)
                                            aggaCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGc                                                        <  2:2865306‑M2/96‑1 (MQ=255)
                                             ggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc                                                       <  2:624839‑M2/97‑1 (MQ=255)
                                               ccTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcg                                                     <  2:332877‑M2/100‑48 (MQ=255)
                                               cCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCtt                                                     >  2:489857‑M2/2‑100 (MQ=255)
                                               cCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCtt                                                     >  1:167203‑M2/2‑100 (MQ=255)
                                               cCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCtt                                                     <  2:2093816‑M2/99‑1 (MQ=255)
                                                cTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTa                                                    >  2:1981384/1‑100 (MQ=255)
                                                  aCAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTAcc                                                  <  2:1200123/100‑1 (MQ=255)
                                                  aCAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTAcc                                                  <  2:207822/100‑1 (MQ=255)
                                                     agaCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCt                                               >  2:2836736/3‑100 (MQ=255)
                                                     aaaCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCACTAGTGCCGAAGCACTCGCCTTACCGCt                                               >  1:282353/1‑100 (MQ=255)
                                                      aaCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTc                                              <  1:2642615/100‑1 (MQ=255)
                                                       aCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTca                                             <  1:1945207/100‑1 (MQ=255)
                                                        cGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTcaa                                            <  2:1638999/100‑1 (MQ=255)
                                                         gCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTcaac                                           <  1:1818257/100‑1 (MQ=255)
                                                          cACTACCCGTAGGTCGGATAAGGCGTTCACGCAGCCTCCGACAGTGCATACTAACCCGTAATCCCGAATAGTGACGAAGCACTCGCCTTACCGCTcaaca                                          >  1:1126963/1‑100 (MQ=38)
                                                             tACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGACGCACTCGCCTTCCCGCTCaaccac                                        >  1:2805466/1‑99 (MQ=255)
                                                             tACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACt                                       <  2:178128/100‑1 (MQ=255)
                                                              aCCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTc                                      <  1:1579194/100‑1 (MQ=255)
                                                               cccGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCa                                     <  2:2603836/100‑1 (MQ=255)
                                                               cccGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCa                                     >  2:787042/1‑100 (MQ=255)
                                                                 cGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCAtt                                   <  2:1981588/100‑1 (MQ=255)
                                                                  gTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTg                                  <  2:1349405/100‑1 (MQ=255)
                                                                   tAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTgg                                 <  1:2403977/100‑1 (MQ=255)
                                                                     ggTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGTACTCGCCTTACCGCTCAACAACTCATTGGTc                               >  1:2622228/1‑100 (MQ=255)
                                                                     ggTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTc                               <  1:2216025/100‑1 (MQ=255)
                                                                     ggTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTc                               >  2:1148201/1‑100 (MQ=255)
                                                                     ggTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTc                               <  1:955335/100‑1 (MQ=255)
                                                                     ggTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTc                               >  1:287497/1‑100 (MQ=255)
                                                                     ggTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTc                               >  1:64478/1‑100 (MQ=255)
                                                                      gTCGGATAAGGCGTTCACGCCGCATCCGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagact                              <  2:149568‑M2/100‑71 (MQ=255)
                                                                        cggatgcggCGTGAACGCCTTATCCGACAGTGCATACTACCCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATa                            <  1:1367152/93‑1 (MQ=37)
                                                                        cGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATa                            <  1:503184/100‑1 (MQ=255)
                                                                         ggATAAGGCGTTCACGCCGCATCCGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcagcccgcacaagactatc                           <  2:2201675‑M2/100‑74 (MQ=255)
                                                                         ggATAAGGCGTTCACGCCGCATCCGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatc                           <  1:716709‑M2/100‑74 (MQ=255)
                                                                             aaGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTg                       <  1:2521722/100‑1 (MQ=255)
                                                                             aaGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTg                       <  1:1021077/100‑1 (MQ=255)
                                                                             aaGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTg                       <  1:2581802/100‑1 (MQ=255)
                                                                              aGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGc                      <  1:1218173/100‑1 (MQ=255)
                                                                               ggCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGcc                     <  1:1260211/100‑1 (MQ=255)
                                                                               ggCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGcc                     >  1:1183098/1‑100 (MQ=255)
                                                                                 cGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAg                   <  1:2298823/100‑1 (MQ=255)
                                                                                 cGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAg                   <  1:2291299/100‑1 (MQ=255)
                                                                                 cGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAg                   <  2:429117/100‑1 (MQ=255)
                                                                                    tCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCg                >  1:1454851/1‑100 (MQ=255)
                                                                                    tCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCg                >  2:2856482/1‑100 (MQ=255)
                                                                                     cACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGa               >  1:2914641/1‑100 (MQ=255)
                                                                                      aCGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGAt              <  1:1553250/100‑1 (MQ=255)
                                                                                      aCGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGAt              <  1:170426/100‑1 (MQ=255)
                                                                                       cgccgcATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATg             <  1:791877/100‑1 (MQ=255)
                                                                                       cgccgcATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATg             <  1:179120/100‑1 (MQ=255)
                                                                                        gccgcATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATgc            <  2:2561772/100‑1 (MQ=255)
                                                                                          cgcATCCGACAGTGCATACTAACCCGTAATCCCCAATATTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATAGGTCACACCCTGCCAGACCAAgcgc          >  1:2875829/1‑100 (MQ=255)
                                                                                             agccgaCctacgggtagtgcgttttgtaggcctgagaagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccactt        >  1:2360535‑M2/3‑7 (MQ=255)
                                                                                             aTCCGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccacttt       <  1:1010011‑M2/100‑94 (MQ=255)
                                                                                              tCCGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccacttta      <  1:698826‑M2/100‑95 (MQ=255)
                                                                                              tCCGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccacttta      >  1:1971886‑M2/1‑6 (MQ=255)
                                                                                               ccGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccactttac     >  2:511570‑M2/1‑5 (MQ=255)
                                                                                                cGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccactttacg    >  1:624834‑M2/1‑4 (MQ=255)
                                                                                                cGACctacgggtagagcgttttgtagccctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagcccatctcctaaaccccaacccctctac     <  1:2264575‑M2/99‑96 (MQ=255)
                                                                                                cGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCCAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGCCCGTCg    >  1:1630180/1‑100 (MQ=255)
                                                                                                 gACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACATCTCATGGGTCATACCCTGCCAGGCGATGCGCCCGTCgg   <  1:1105734/100‑1 (MQ=255)
                                                                                                  aCAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGCCCGTCGGc  <  1:38344/100‑1 (MQ=255)
                                                                                                   cctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccactttacgca  <  1:1278271‑M2/99‑99 (MQ=255)
                                                                                                   |                                                                                                  
AGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGCCCGTCGGC  >  NC_000913/72121‑72318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.