New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 230447774 (0.710)20 (0.210) 6/164 NT 21.6% noncoding (61/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 2304495 77 (0.810)noncoding (79/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 174 total aligned reads displayed.

CGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGA  >  NC_000913/2304378‑2304576
                                                                                                   |                                                                                                   
  cgGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGTCGGTTGCCTGATGc                                                                                                   <  2:2493644/100‑1 (MQ=255)
      aGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACg                                                                                               >  1:1250927/1‑100 (MQ=255)
       gTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGc                                                                                              >  2:1697328/1‑100 (MQ=255)
          cGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTgg                                                                                           >  2:938329/1‑100 (MQ=255)
           gCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGgc                                                                                          <  2:1541533/100‑1 (MQ=40)
            cTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGgcg                                                                                         >  2:2378755/1‑100 (MQ=40)
             tAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGgcgc                                                                                        >  1:209346/1‑100 (MQ=40)
              aaaCTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGcgcg                                                                                       <  2:2675464/100‑1 (MQ=38)
              aaaCTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGcgcg                                                                                       >  1:1169840/1‑100 (MQ=38)
                 cTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGATTGCCTGATGCGACGCTGGCGCGTCt                                                                                    >  2:2305080/1‑100 (MQ=25)
                   gCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCtt                                                                                   >  2:1325604/1‑99 (MQ=32)
                   gCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTa                                                                                  <  2:2872626‑M2/100‑2 (MQ=255)
                     cGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatc                                                                                >  2:1591159‑M2/1‑97 (MQ=255)
                     cGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatc                                                                                >  2:1096730‑M2/1‑97 (MQ=255)
                      gTGAAGTGCGGCACCCCGTAGGTCAGACACGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatca                                                                               >  1:339070‑M2/1‑96 (MQ=255)
                      gTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatca                                                                               <  1:2516121‑M2/100‑5 (MQ=255)
                       tGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcag                                                                              >  2:104141‑M2/1‑95 (MQ=255)
                       tGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTCGCGCGTCTTatcag                                                                              <  1:2234154‑M2/100‑6 (MQ=255)
                        gAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagn                                                                             >  1:1422936‑M2/1‑94 (MQ=255)
                        gAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagg                                                                             >  2:1877575‑M2/1‑94 (MQ=255)
                        gAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagg                                                                             >  2:1057876‑M2/1‑94 (MQ=255)
                        gAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagg                                                                             <  2:303021‑M2/100‑7 (MQ=255)
                         aaGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggc                                                                            >  2:1422199‑M2/1‑93 (MQ=255)
                         aaGTGCGCCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagg                                                                             >  1:1000824‑M2/1‑93 (MQ=255)
                          aGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggca                                                                           <  2:705223‑M1/100‑27 (MQ=255)
                          aGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcgggc                                                                            >  1:2650260‑M2/1‑92 (MQ=255)
                           gTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTCatcagg                                                                             <  1:147615‑M2/97‑7 (MQ=255)
                            tgctccaccccGTAGGTCTGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaac                                                                         <  1:424173‑M1/95‑29 (MQ=255)
                            tGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaac                                                                         <  1:323908‑M1/100‑29 (MQ=255)
                            tGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATatgacgcgccagcgtcgcatcaggcaac                                                                         <  2:380172‑M1/100‑29 (MQ=255)
                             gtggcaCCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaacc                                                                        <  1:1766990‑M1/98‑30 (MQ=255)
                             gctccacccCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaacc                                                                        <  1:1367448‑M1/96‑30 (MQ=255)
                             gCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaacc                                                                        <  1:1334969‑M1/100‑30 (MQ=255)
                             gCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaacc                                                                        <  2:2211591‑M1/100‑30 (MQ=255)
                               tccacCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaaccgg                                                                      <  2:139380‑M1/98‑32 (MQ=255)
                                ccaCCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaaccggc                                                                     <  2:2032435‑M1/99‑33 (MQ=255)
                                ccaCCCCGTAGGTTGGACAAGGCGGTTCCGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaacc                                                                        <  1:499389‑M1/96‑30 (MQ=255)
                                                aCAAGGCGGTCTCGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCa                                                     <  1:543351/100‑1 (MQ=18)
                                                  aaGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaaccggctcgggcgttagatgttg                                                    <  2:2736445‑M1/99‑50 (MQ=255)
                                                   aGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCAccc                                                  >  1:1661887/1‑100 (MQ=35)
                                                   aGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCAccc                                                  >  2:1091550/1‑100 (MQ=38)
                                                   aGGCGGTCACGCCGCATCCGACATCCAACCCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCAccc                                                  <  1:2702930/100‑1 (MQ=25)
                                                    ggCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTGCACCGCTGTGAAGTGCGGCAcccc                                                 >  1:1265125/1‑100 (MQ=25)
                                                      cGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGt                                               >  2:1519782/1‑100 (MQ=38)
                                                        gTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAg                                             <  2:2869456/100‑1 (MQ=38)
                                                        gTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAg                                             <  2:893400/100‑1 (MQ=38)
                                                         tCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttggatgtcggatgcggc                                            <  2:2639091‑M2/100‑40 (MQ=255)
                                                            cgccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTc                                          >  2:706481/1‑99 (MQ=35)
                                                            cgccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTc                                          >  1:792492/1‑99 (MQ=35)
                                                             gccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAg                                        <  2:1032019/100‑1 (MQ=40)
                                                              ccgcATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAAGCCCGCACGGGCGTGGTGTGGGGCAccagtgtggct                                          >  1:949394/1‑88 (MQ=1)
                                                              ccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGa                                       <  2:1342648/100‑1 (MQ=40)
                                                                gcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACa                                     <  2:2259159/100‑1 (MQ=255)
                                                                 cATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACaa                                    >  1:2797406/1‑100 (MQ=255)
                                                                   tCCGACATCCAACGCCTGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGGAGTGCGGCACCCCGTTGGTCAGACAggg                                  >  1:2636778/1‑100 (MQ=14)
                                                                     caacaTCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttagatgttggatgcggcgtaaccgcctta                                <  2:157830‑M2/98‑52 (MQ=255)
                                                                     caacaTCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttagatgttggatgcggcgtaaccgcctt                                 <  2:2736445‑M2/97‑51 (MQ=255)
                                                                     cGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCg                                <  1:485569/100‑1 (MQ=255)
                                                                      gACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCgg                               <  2:1507160/100‑1 (MQ=255)
                                                                      gACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCgg                               <  2:777999/100‑1 (MQ=255)
                                                                           ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcg                          <  2:2756956/100‑1 (MQ=255)
                                                                           ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcg                          >  2:339072/1‑100 (MQ=255)
                                                                           ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcg                          >  1:697577/1‑100 (MQ=255)
                                                                           ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGCGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcg                          <  1:1794319/100‑1 (MQ=255)
                                                                            cAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgc                         >  2:1629187/1‑100 (MQ=255)
                                                                            cAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgc                         >  2:1808885/1‑100 (MQ=255)
                                                                                gCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCa                     <  2:1652989/100‑1 (MQ=255)
                                                                                 cccGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCAt                    >  2:35788/1‑100 (MQ=255)
                                                                                 cccGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCAt                    >  2:436210/1‑100 (MQ=255)
                                                                                   cGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATcc                  >  2:2398953/1‑100 (MQ=255)
                                                                                     aGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGCAGGTCAGACAAGGCGGTTACGCCGCATccca                <  2:1959305/100‑3 (MQ=255)
                                                                                      gCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcggacgttggatgtcggatgcggcgtaaccgccttatccaacctacggggtgg               <  2:2032435‑M2/100‑69 (MQ=255)
                                                                                       ccGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcggacgttggatgtcggatgcggcgtaaccgccttatccaacctacggggtgga              <  2:139380‑M2/100‑70 (MQ=255)
                                                                                       ccGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACa              >  2:294488/1‑100 (MQ=255)
                                                                                        cGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtgg               <  1:1849464‑M2/98‑69 (MQ=255)
                                                                                        cGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccg             <  1:2006373‑M2/100‑71 (MQ=255)
                                                                                        cGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGAc               <  1:154478/98‑1 (MQ=255)
                                                                                         ggTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgc            <  1:1450149‑M2/100‑72 (MQ=255)
                                                                                         ggTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgc            <  2:1108289‑M2/100‑72 (MQ=255)
                                                                                           ttGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcac          <  1:1710137‑M2/100‑74 (MQ=255)
                                                                                            tGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCaa         >  1:1422196/1‑100 (MQ=255)
                                                                                            tGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCaa         <  2:1002763/100‑1 (MQ=255)
                                                                                             gCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggcttgggcgttagatgtcggatgcggcgtcaccgccttgtccgacctccggggtgccgcacct        <  1:2355702‑M2/100‑76 (MQ=255)
                                                                                              ccTGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtggcgcactt        >  1:1000824‑M1/1‑6 (MQ=255)
                                                                                              ccTGATaagacgcgccagcgtcgcatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcacttc       >  2:2248117‑M1/1‑6 (MQ=255)
                                                                                              ccTGATaagacgcgccagcgtcgcatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcacttc       >  1:423086‑M1/1‑6 (MQ=255)
                                                                                              ccTGATaagacgcgccagcgtcgcatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcactt        >  2:391909‑M1/1‑6 (MQ=255)
                                                                                               cTGGTGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTTACGCCGCATCCGACATCCAACg       >  2:1849472/1‑99 (MQ=255)
                                                                                                tGATaagacgcgccagcgtcgcatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcacttcac     <  1:2516121‑M1/100‑97 (MQ=255)
                                                                                                tGATaagacgcgccagcgtcgcatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcacttcac     <  2:1367450‑M1/100‑97 (MQ=255)
                                                                                                tGATaagacgcgccagcgtcgcatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccgtgtctgacctacggggtgccgcacttcac     >  1:339070‑M1/1‑4 (MQ=255)
                                                                                                tGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGcc     >  1:70426/1‑100 (MQ=255)
                                                                                                tGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGcc     >  1:1386031/1‑100 (MQ=255)
                                                                                                 gATaagacgcgccagcgtcgcatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcacttcac     >  1:1510020‑M1/1‑3 (MQ=255)
                                                                                                  aTaagacgcgccagcgtcgcatcagtcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcacttcacgg   <  2:996061‑M1/100‑99 (MQ=255)
                                                                                                  aTGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGACACGCCGCATCCGACATCCAACGCCCg   >  1:733360/1‑100 (MQ=255)
                                                                                                   taagacgcgccagcgtcgcatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcacttcacggc  <  2:290820‑M1/100‑100 (MQ=255)
                                                                                                   taagacgcgccagcgtcgcatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcacttcacggc  >  2:1631926‑M1/1‑1 (MQ=255)
                                                                                                   taagacgcgccagcgtcgcatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgcctagtctgacctacggggggccgcacttcacgg   >  1:722637‑M1/1‑1 (MQ=255)
                                                                                                   tGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGa  >  2:59181/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CGCGGTAGTTCGCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGA  >  NC_000913/2304378‑2304576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.