New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 230447774 (0.710)20 (0.210) 6/164 NT 21.6% noncoding (61/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 2304495 77 (0.810)noncoding (79/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 129 total aligned reads displayed.

GCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGA  >  NC_000913/2304397‑2304594
                                                                                                  |                                                                                                   
gCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCtt                                                                                                     >  2:1325604/1‑99 (MQ=32)
gCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTa                                                                                                    <  2:290820‑M2/100‑2 (MQ=255)
gCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTa                                                                                                    >  2:1631926‑M2/1‑99 (MQ=255)
 ccGTGAAGTGCGGCCCCCCGTAGGTCAGACTAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTa                                                                                                    >  1:722637‑M2/1‑98 (MQ=255)
  cGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatc                                                                                                  >  2:1591159‑M2/1‑97 (MQ=255)
  cGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatc                                                                                                  >  2:1096730‑M2/1‑97 (MQ=255)
   gTGAAGTGCGGCACCCCGTAGGTCAGACACGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatca                                                                                                 >  1:339070‑M2/1‑96 (MQ=255)
   gTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatca                                                                                                 <  2:1367450‑M2/100‑5 (MQ=255)
   gTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatc                                                                                                  >  1:1510020‑M2/1‑96 (MQ=255)
    tGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcag                                                                                                >  2:104141‑M2/1‑95 (MQ=255)
    tGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTCGCGCGTCTTatcag                                                                                                <  1:2234154‑M2/100‑6 (MQ=255)
     gAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagn                                                                                               >  1:1422936‑M2/1‑94 (MQ=255)
     gAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagg                                                                                               >  2:1877575‑M2/1‑94 (MQ=255)
     gAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagg                                                                                               <  2:303021‑M2/100‑7 (MQ=255)
     gAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagg                                                                                               >  2:1057876‑M2/1‑94 (MQ=255)
     gAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagg                                                                                               >  1:423086‑M2/1‑94 (MQ=255)
      aaGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggc                                                                                              >  2:1422199‑M2/1‑93 (MQ=255)
      aaGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagg                                                                                               >  2:391909‑M2/1‑93 (MQ=255)
      aaGTGCGCCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcagg                                                                                               >  1:1000824‑M2/1‑93 (MQ=255)
       aGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcgggc                                                                                              >  1:2650260‑M2/1‑92 (MQ=255)
        gTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTCatcagg                                                                                               <  1:147615‑M2/97‑7 (MQ=255)
                             aCAAGGCGGTCTCGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCa                                                                       <  1:543351/100‑1 (MQ=18)
                                aGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCAccc                                                                    >  2:1091550/1‑100 (MQ=38)
                                aGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCAccc                                                                    >  1:1661887/1‑100 (MQ=35)
                                aGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCAccc                                                                    <  1:1091548/100‑1 (MQ=38)
                                 ggCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTGCACCGCTGTGAAGTGCGGCAcccc                                                                   >  1:1265125/1‑100 (MQ=25)
                                 ggCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCAcccc                                                                   >  2:1454681/1‑100 (MQ=38)
                                 ggCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCAcccc                                                                   >  1:869250/1‑100 (MQ=35)
                                   cGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGt                                                                 >  2:1519782/1‑100 (MQ=38)
                                     gTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAg                                                               <  2:2869456/100‑1 (MQ=38)
                                     gTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAg                                                               <  2:893400/100‑1 (MQ=38)
                                      tCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttggatgtcggatgcggc                                                              <  2:2639091‑M2/100‑40 (MQ=255)
                                         cgccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTc                                                            >  2:706481/1‑99 (MQ=35)
                                         cgccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTc                                                            >  1:792492/1‑99 (MQ=35)
                                         cgccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCa                                                           >  1:2737229/1‑100 (MQ=38)
                                          gccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAg                                                          <  2:1032019/100‑1 (MQ=40)
                                           ccgcATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAAGCCCGCACGGGCGTGGTGTGGGGCAccagtgtggct                                                            >  1:949394/1‑88 (MQ=1)
                                           ccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGa                                                         <  2:1342648/100‑1 (MQ=40)
                                           ccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCCTAGGTCAg                                                          >  2:2368537/1‑99 (MQ=255)
                                             gcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACa                                                       <  2:2259159/100‑1 (MQ=255)
                                             gcATCCGACACCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACa                                                       <  1:2378744/100‑1 (MQ=255)
                                              cATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACaa                                                      >  1:2797406/1‑100 (MQ=255)
                                              cATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACaa                                                      <  2:2737239/100‑1 (MQ=255)
                                                tCCGACATCCAACGCCTGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGGAGTGCGGCACCCCGTTGGTCAGACAggg                                                    >  1:2636778/1‑100 (MQ=14)
                                                  caacaTCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttagatgttggatgcggcgtaaccgcctta                                                  <  2:157830‑M2/98‑52 (MQ=255)
                                                  cGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCg                                                  <  1:485569/100‑1 (MQ=255)
                                                   gACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCgg                                                 <  2:1507160/100‑1 (MQ=255)
                                                   gACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCgg                                                 <  2:777999/100‑1 (MQ=255)
                                                       tCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAc                                             >  2:2664637/1‑100 (MQ=255)
                                                        ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcg                                            <  2:2756956/100‑1 (MQ=255)
                                                        ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcg                                            >  2:339072/1‑100 (MQ=255)
                                                        ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcg                                            >  1:697577/1‑100 (MQ=255)
                                                        ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGCGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcg                                            <  1:1794319/100‑1 (MQ=255)
                                                         cAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgc                                           >  2:1808885/1‑100 (MQ=255)
                                                         cAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgc                                           >  2:1629187/1‑100 (MQ=255)
                                                           aCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgccg                                         <  2:697579/100‑1 (MQ=255)
                                                             gCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCa                                       <  2:1652989/100‑1 (MQ=255)
                                                                cGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATcc                                    >  2:2398953/1‑100 (MQ=255)
                                                                  aGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGCAGGTCAGACAAGGCGGTTACGCCGCATccca                                  <  2:1959305/100‑3 (MQ=255)
                                                                   gCCGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcggacgttggatgtcggatgcggcgtaaccgccttatccaacctacggggtgg                                 <  2:2032435‑M2/100‑69 (MQ=255)
                                                                   gCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGAc                                 <  2:366732/100‑1 (MQ=255)
                                                                    ccGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACa                                >  2:294488/1‑100 (MQ=255)
                                                                     cGGTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtgg                                 <  1:1849464‑M2/98‑69 (MQ=255)
                                                                     cGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGAc                                 <  1:154478/98‑1 (MQ=255)
                                                                      ggTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgc                              <  1:1334969‑M2/100‑72 (MQ=255)
                                                                      ggTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgc                              <  1:1450149‑M2/100‑72 (MQ=255)
                                                                      ggTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgc                              <  2:2211591‑M2/100‑72 (MQ=255)
                                                                      ggTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcggacgttggatgtcggatgcggcgtaaccgccttatccaacctacggggtggagc                              <  1:1367448‑M2/100‑72 (MQ=255)
                                                                      ggTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcggacgttggatgtcggatgcggcggaaccgccttgtccaacctacggggtgg                                 <  1:499389‑M2/97‑69 (MQ=255)
                                                                       gTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatcagacctacggggtggagca                             <  1:424173‑M2/100‑73 (MQ=255)
                                                                       gTTGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcggacgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgca                             <  1:323908‑M2/100‑73 (MQ=255)
                                                                       gTTGCCTGATGCGACGCTGGCGCGTCATatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgca                             <  2:380172‑M2/100‑73 (MQ=255)
                                                                        ttGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcac                            <  1:1710137‑M2/100‑74 (MQ=255)
                                                                         tGCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggctcgggcgttggatgtcggatgcggcgtgaccgccttgtctgacctacggggtgccgcact                           <  2:705223‑M2/100‑75 (MQ=255)
                                                                         tGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCaa                           <  2:1002763/100‑1 (MQ=255)
                                                                         tGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCaa                           <  2:1003792/100‑1 (MQ=255)
                                                                         tGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCaa                           >  1:1422196/1‑100 (MQ=255)
                                                                          gCCTGATGCGACGCTGGCGCGTCTTatcaggcaaccggcttgggcgttagatgtcggatgcggcgtcaccgccttgtccgacctccggggtgccgcacct                          <  1:2355702‑M2/100‑76 (MQ=255)
                                                                          gCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAAc                          >  2:1593511/1‑100 (MQ=255)
                                                                            cTGGTGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTTACGCCGCATCCGACATCCAACg                         >  2:1849472/1‑99 (MQ=255)
                                                                             tGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGcc                       >  1:70426/1‑100 (MQ=255)
                                                                             tGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGcc                       <  2:948180/100‑1 (MQ=255)
                                                                              gATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGACACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGccc                      >  2:1144404/1‑100 (MQ=255)
                                                                               aTGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGACACGCCGCATCCGACATCCAACGCCCg                     >  1:733360/1‑100 (MQ=255)
                                                                                tGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGa                    >  2:59181/1‑100 (MQ=255)
                                                                                  cGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCAGACAACGCGGTCACGCCGCATCCGACATCCAACGCCCGAGc                  >  1:1435510/1‑100 (MQ=255)
                                                                                  cGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGc                  <  2:2211881/100‑1 (MQ=255)
                                                                                       cTGGCGCCTCTTATCTGGCCGACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGt              <  1:1984518/99‑1 (MQ=255)
                                                                                         ggCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGc           >  1:2079492/1‑100 (MQ=255)
                                                                                         ggCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGc           >  1:1080202/1‑100 (MQ=255)
                                                                                          gcgcGTCTTATCAGGCCTACACCGCTGTGAAGTGCTGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCAACATCCACCGCCCGAGCCGGTTGc           >  2:985054/1‑99 (MQ=255)
                                                                                          gcgcGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGcc          <  2:772137/100‑1 (MQ=255)
                                                                                          gcgcGTCTGATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGcc          <  1:1042046/100‑1 (MQ=255)
                                                                                           cgcgTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCt         >  1:1677732/1‑100 (MQ=255)
                                                                                              gTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGCGCCGGTTGCCTGAt      >  1:426849/1‑100 (MQ=255)
                                                                                               tCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCGGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGGTGCCt         >  1:2617022/1‑96 (MQ=255)
                                                                                               tCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATg     >  2:2592090/1‑100 (MQ=255)
                                                                                               tCTTATCAGGCCTACACCGCTGTGAAGTGCGACACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATg     <  2:2269803/100‑1 (MQ=255)
                                                                                                cTTATCTGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGc    <  1:1653127/100‑1 (MQ=255)
                                                                                                  tATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGa  >  2:951504/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
GCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGA  >  NC_000913/2304397‑2304594

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.