| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4486252 = | 89 (0.860) | 14 (0.150) | 9/162 | NT | 16.6% | coding (35/1101 nt) | lptF | lipopolysaccharide export ABC permease |
| ? | NC_000913 | 4486291 = | 60 (0.640) | coding (74/1101 nt) | lptF | lipopolysaccharide export ABC permease | |||||
Only 100 of 120 total aligned reads displayed.
TGACGTTTAAGCCATGAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGC > NC_000913/4486153‑4486351 | ccggcacgcccaacccgagaagggagagcaccagattcgccggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagat < 1:1453320‑M1/1‑1 (MQ=255) cggcacgcccaacccgagaagggagagcaccagattcgccggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTc > 2:2644882‑M1/99‑100 (MQ=255) cggcacgcccaacccgagaagggagagcaccagattcgccggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTc > 2:1472637‑M1/99‑100 (MQ=255) gcacgcccaacccgagaagggagagcaccagattcgccggaatatcgaagtcaaccgcggcgccgaggatcctcactaacttttgacagaagaagaTCa > 1:2457169‑M1/97‑99 (MQ=255) cGTTTAAGCCATGAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCaa > 2:132069/1‑100 (MQ=255) gTTTAAGCCATGAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCaaa > 2:1903553/1‑100 (MQ=255) cacgcccaacccgagaagggagagcaccagattcgccggaatatcgccgtcaaccgctgcgccgaggaacctcactaacttttgacagaagaagaTCaaa < 1:655458‑M1/5‑1 (MQ=255) ttAAGCCATGAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAg < 2:648641/100‑1 (MQ=255) ttAAGCCATGAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAg < 2:1950176/100‑1 (MQ=255) ttAAGCCATGAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAg < 1:794942/100‑1 (MQ=255) ttAAGCCATGAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAg < 1:1739382/100‑1 (MQ=255) tAAGCCATGAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGc > 1:328953/1‑100 (MQ=255) gcccaacccgagaagggagagcaccagattcgccggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGc < 2:35926‑M1/8‑1 (MQ=255) aGCCATGAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCa > 2:933932/1‑100 (MQ=255) ccATGAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGc < 2:114268/100‑1 (MQ=255) cATGAAACAAGCTAAAAACCTGTAAAACAAGAGTTTTTATGGGCGTATTTAAAGTGCTAATCATAAGATATCTGGTGCGGGAGTCGCTCAGTAGCCAGCt < 1:800385/100‑1 (MQ=255) aTGAAACAAGCTAACATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTATAGTGATAAGCATTAGCTATCTGGTGCTCGTGCGGCCCAATAGCCAGCTg > 1:345575/1‑100 (MQ=255) gAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGc < 1:2207385/100‑1 (MQ=255) gAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGc < 2:1485531/100‑1 (MQ=255) aaaCAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCg > 2:2801647/1‑100 (MQ=255) aaaCAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCg < 2:1632314/100‑1 (MQ=255) aaCAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGa > 2:33739/1‑100 (MQ=255) aaCAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGa < 2:1535113/100‑1 (MQ=255) aCAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGAt > 2:83540/1‑100 (MQ=255) aGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATAct > 2:2431411/1‑100 (MQ=255) gCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATActc > 2:1258289/1‑100 (MQ=255) cTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATActct < 2:2164545/100‑1 (MQ=255) tAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCtt < 2:522275/100‑1 (MQ=255) tAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGAGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCtt > 1:1929981/1‑100 (MQ=255) aaaaTCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTc < 2:2438287/100‑1 (MQ=255) aaaaTCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTc < 1:83539/100‑1 (MQ=255) aaaTCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCa < 2:2621368/100‑1 (MQ=255) aTCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATc > 2:2438986/1‑100 (MQ=255) aTCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATc < 2:524003/100‑1 (MQ=255) tCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCt < 2:820377/100‑1 (MQ=255) ccTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCtt > 1:2497482/1‑100 (MQ=255) ccTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCtt < 2:1836114/100‑1 (MQ=255) cTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTg > 1:998825/1‑100 (MQ=255) tGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCACCTGGCGATACTCTTCATCTTGc < 1:1692657/100‑1 (MQ=255) gCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCt > 2:2689009/1‑100 (MQ=255) aaaaGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCttt < 2:2450415/100‑1 (MQ=255) tcgccggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCtttt > 1:510444‑M1/64‑100 (MQ=255) aaaGACGAGTTTTGACGGGCGTATTTAAAGTGATAATCATAAGATATCTTGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCtttt < 2:535115/100‑1 (MQ=255) gccggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGa > 1:1251917‑M1/62‑100 (MQ=255) aGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGa < 1:2541420/100‑1 (MQ=255) ccggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTTAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAt > 1:1090903‑M1/61‑100 (MQ=255) cggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc < 1:734224‑M1/41‑1 (MQ=255) cggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc > 1:539489‑M1/60‑100 (MQ=255) cggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc > 1:2326592‑M1/60‑100 (MQ=255) ggaatatcgccgtcaaccgctgcgccgaggatcctccctaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtct > 2:2040356‑M1/59‑100 (MQ=255) ggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtct > 1:1119703‑M1/59‑100 (MQ=255) ggaatatcgccgtcaaccgcggcgccgaggatcctcgctaactttggacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtct > 1:488797‑M1/59‑100 (MQ=255) gaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtctt > 2:438038‑M1/58‑100 (MQ=255) aGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttc < 2:2694470/100‑1 (MQ=255) gTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttct > 1:2059438/1‑100 (MQ=255) gTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcn < 1:913200/100‑2 (MQ=255) gTTTTTACCGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATCCTCTCCATCTTGCTTTTGAtc > 1:2695514/1‑96 (MQ=255) tttttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttctn < 2:480242/100‑2 (MQ=255) ttttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc < 1:2431400/100‑1 (MQ=255) ttttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc < 2:2696628/100‑1 (MQ=255) atcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc > 2:2537447‑M1/54‑100 (MQ=255) atcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc > 2:734226‑M1/54‑100 (MQ=255) ttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg < 1:1513376/100‑1 (MQ=255) aCGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTc > 1:1491446/1‑100 (MQ=255) cGGGCGTCTATAAATTGATAATCATAAGTTATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGTGATACTCTTCATCTTGCTTTTGATCTTCTTCTGt < 1:2171208/98‑1 (MQ=255) ggCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTc > 1:1706695/1‑97 (MQ=255) cGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAACGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAg < 1:1768754/100‑1 (MQ=255) cGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAg < 1:268268/100‑1 (MQ=255) cGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAg < 2:241829/100‑1 (MQ=255) aTTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTa < 2:1777012/100‑1 (MQ=255) tttAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCacaa > 1:1920034/1‑95 (MQ=255) tttAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAg > 2:2263536/1‑100 (MQ=255) tttAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAg > 2:1478925/1‑100 (MQ=255) ttAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGt > 1:843068/1‑100 (MQ=255) tAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGt > 1:2898335/1‑99 (MQ=255) aaaGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGa > 1:651380/1‑100 (MQ=255) aaGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAg < 2:2722732/100‑1 (MQ=255) aaGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTAATCTTGATTTTGATCTTCTTCTGTCAAAGGTTACTGa > 1:1301316/1‑99 (MQ=255) tGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGAt < 2:1011119/100‑1 (MQ=255) aTAATCATAGCTTATCTGTTGCTGGATGTTATCAAAAGTAAGTTCGTGATACTCTGCATCTTGCTTTTGATGTTCTTCTGTCAAAAGTTAGTGTGGAtga < 1:1164718/100‑3 (MQ=255) aTAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATc < 2:2591011/99‑1 (MQ=255) tAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCt > 1:2606620/1‑100 (MQ=255) aTCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCg > 2:1494699/1‑100 (MQ=255) tCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCgg > 1:2773329/1‑100 (MQ=255) tCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCg > 1:2660821/1‑99 (MQ=255) aTAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATACTCGgcg > 1:1570531/1‑100 (MQ=255) tAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGgcgc < 2:718507/100‑1 (MQ=255) aaGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCa > 1:1098633/1‑100 (MQ=255) atCTGGTACGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGt < 2:1013882/100‑1 (MQ=255) tCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGtt < 2:183223/100‑1 (MQ=255) cTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTg < 1:831077/100‑1 (MQ=255) gCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTAGGCGCAGCGGTTGACGGc > 2:277381/1‑100 (MQ=255) cGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCg < 2:328955/100‑1 (MQ=255) gaCGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATAtt > 2:1243637/1‑100 (MQ=255) ngCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 1:1773746/2‑100 (MQ=255) cGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 2:1230204/1‑100 (MQ=255) cGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 2:1081536/1‑100 (MQ=255) cGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 2:2544688/1‑100 (MQ=255) cTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCgg < 2:2220872/100‑1 (MQ=255) TCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGc > 2:1098635‑M1/1‑100 (MQ=255) | TGACGTTTAAGCCATGAAACAAGCTAAAATCCTGCAAAAGACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGC > NC_000913/4486153‑4486351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |