| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4486252 = | 89 (0.860) | 14 (0.150) | 9/162 | NT | 16.6% | coding (35/1101 nt) | lptF | lipopolysaccharide export ABC permease |
| ? | NC_000913 | 4486291 = | 60 (0.640) | coding (74/1101 nt) | lptF | lipopolysaccharide export ABC permease | |||||
Only 100 of 120 total aligned reads displayed.
GACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGG > NC_000913/4486192‑4486389 | gACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAt < 2:2334773/100‑1 (MQ=255)ccggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTTAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAt > 1:1090903‑M1/61‑100 (MQ=255) cggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc < 1:734224‑M1/41‑1 (MQ=255) cggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc > 1:539489‑M1/60‑100 (MQ=255) cggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc > 1:2326592‑M1/60‑100 (MQ=255) ggaatatcgccgtcaaccgctgcgccgaggatcctccctaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtct > 2:2040356‑M1/59‑100 (MQ=255) ggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtct > 1:1119703‑M1/59‑100 (MQ=255) ggaatatcgccgtcaaccgcggcgccgaggatcctcgctaactttggacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtct > 1:488797‑M1/59‑100 (MQ=255) gaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtctt > 2:438038‑M1/58‑100 (MQ=255) aatatcgccgtcaacccctgagccgaggatcctcactaacttttgacagaagtagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtctt > 1:1255412‑M1/57‑99 (MQ=255) aGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttc < 2:2694470/100‑1 (MQ=255) gTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttct > 1:2059438/1‑100 (MQ=255) gTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcn < 1:913200/100‑2 (MQ=255) gTTTTTACCGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATCCTCTCCATCTTGCTTTTGAtc > 1:2695514/1‑96 (MQ=255) ttttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc < 1:992689/100‑1 (MQ=255) ttttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc < 2:1938526/100‑1 (MQ=255) ttttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc < 1:2431400/100‑1 (MQ=255) ttttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc < 2:2696628/100‑1 (MQ=255) atcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc > 2:734226‑M1/54‑100 (MQ=255) ttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg < 1:1513376/100‑1 (MQ=255) ccgtcaaccgctgcgcccaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg > 1:2864776‑M1/50‑98 (MQ=255) aCGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTc > 1:1491446/1‑100 (MQ=255) cGGGCGTCTATAAATTGATAATCATAAGTTATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGTGATACTCTTCATCTTGCTTTTGATCTTCTTCTGt < 1:2171208/98‑1 (MQ=255) ggCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTc > 1:1706695/1‑97 (MQ=255) cGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAACGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAg < 1:1768754/100‑1 (MQ=255) cGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAg < 2:2649335/100‑1 (MQ=255) cGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAg < 2:241829/100‑1 (MQ=255) cGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAg < 1:268268/100‑1 (MQ=255) tATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGtt < 2:1590/100‑1 (MQ=255) aTTTAACCTGCTAATCATCAGATATCTGGTGCGGGAGACGCTTAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCGGTCAAAAGtt < 1:535793/99‑1 (MQ=255) aTTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTa < 2:1777012/100‑1 (MQ=255) tttAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCacaa > 1:1920034/1‑95 (MQ=255) tttAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAg > 2:1478925/1‑100 (MQ=255) tttAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAg > 2:2263536/1‑100 (MQ=255) ttAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGt > 1:843068/1‑100 (MQ=255) tAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGt > 1:2898335/1‑99 (MQ=255) aaaGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGa > 1:651380/1‑100 (MQ=255) aaGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAg < 2:2722732/100‑1 (MQ=255) aaGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTAATCTTGATTTTGATCTTCTTCTGTCAAAGGTTACTGa > 1:1301316/1‑99 (MQ=255) tGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGAt < 2:1011119/100‑1 (MQ=255) aTAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATc < 2:2591011/99‑1 (MQ=255) tAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCt > 1:1690148/1‑100 (MQ=255) tAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCt > 1:2220863/1‑100 (MQ=255) tAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCt > 1:2606620/1‑100 (MQ=255) aTCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCg > 2:1494699/1‑100 (MQ=255) tCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCg > 1:2660821/1‑99 (MQ=255) tAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGgcgc < 2:718507/100‑1 (MQ=255) aaGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCa > 1:1098633/1‑100 (MQ=255) atCTGGTACGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGt < 2:1013882/100‑1 (MQ=255) tCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGtt < 2:183223/100‑1 (MQ=255) cTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTg < 1:831077/100‑1 (MQ=255) gCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTAGGCGCAGCGGTTGACGGc > 2:277381/1‑100 (MQ=255) cagaagaagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTGGGCGCAGCGGTTGACgg > 1:2864776‑M2/50‑98 (MQ=255) cGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCg < 2:328955/100‑1 (MQ=255) gaagaagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGat > 2:2537447‑M2/48‑100 (MQ=255) gaagaagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGat > 2:734226‑M2/48‑100 (MQ=255) gaCGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATAtt > 2:1243637/1‑100 (MQ=255) aagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTc > 2:438038‑M2/44‑100 (MQ=255) aagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTACTTCTGTCAAAAGTTAGTGAGGATCCTCGGCTCAGGGGTTGACGGCGATAtt > 1:1255412‑M2/44‑99 (MQ=255) ngCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 1:1773746/2‑100 (MQ=255) cGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 2:1081536/1‑100 (MQ=255) cGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 2:1230204/1‑100 (MQ=255) cGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 2:2544688/1‑100 (MQ=255) agatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 1:1119703‑M2/43‑100 (MQ=255) gatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCg > 1:539489‑M2/42‑100 (MQ=255) gatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCg < 1:734224‑M2/59‑1 (MQ=255) cTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCgg < 2:2220872/100‑1 (MQ=255) atcaaaagcaagatgaagagtatcgccagctggcttttaaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCgg > 1:1090903‑M2/41‑100 (MQ=255) tcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGc > 1:1251917‑M2/40‑100 (MQ=255) CAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGTGGTTGACGGCGATATTgcggcg < 1:1712717‑M1/100‑1 (MQ=255) CAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCg > 1:2728579‑M1/1‑100 (MQ=255) aaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGa > 1:510444‑M2/38‑100 (MQ=255) AAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGa < 1:2225519‑M1/100‑1 (MQ=255) AAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGaa < 1:2248089‑M1/100‑1 (MQ=255) GCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCt > 2:1128258‑M1/1‑100 (MQ=255) ggCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGctc > 1:2680441/1‑100 (MQ=255) cGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCtctc > 2:1023368/1‑100 (MQ=255) gATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCtctc < 1:2591931/99‑1 (MQ=255) tACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCt < 1:1930690/100‑1 (MQ=255) naCTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCt > 1:2504984/2‑100 (MQ=255) ttCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCg > 1:1187870/1‑100 (MQ=255) aTCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGt < 2:2773339/100‑1 (MQ=255) tCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGtt > 2:1787761/1‑100 (MQ=255) cTTGCTTTTGTTCGTTGTCTGTCAAAAGTTAGTGAGGATCCGCGGCGCAGCGGTTGACGGCGATATTCCGGCGGATCTGGTGCGCTCCCTGCTCGGGTTg < 1:1434758/100‑1 (MQ=255) cTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTg > 2:450243/1‑100 (MQ=255) ttGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTgg > 2:1601034/1‑100 (MQ=255) ttGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTgg < 1:2807250/100‑1 (MQ=255) tGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTggg < 2:1360700/100‑1 (MQ=255) tGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTggg < 2:114896/100‑1 (MQ=255) tGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTggg > 1:1941720/1‑100 (MQ=255) tGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTgg > 2:563095/1‑99 (MQ=255) tGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATACTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTggg > 1:1545504/1‑100 (MQ=255) gcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGc < 2:35926‑M2/92‑1 (MQ=255) cttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGgcn < 2:2504995‑M2/93‑2 (MQ=255) tgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCCGCGGTTGACTTCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGc > 1:2457169‑M2/4‑99 (MQ=255) gaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCg > 2:1472637‑M2/3‑100 (MQ=255) gaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCg > 2:2644882‑M2/3‑100 (MQ=255) aTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCgg < 1:1453320‑M2/99‑1 (MQ=255) aTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCgg > 2:695866‑M2/2‑100 (MQ=255) tcttcttctCTCAAAAGTTAGTGAGGATCCTCCGCGCAGCGGTAGACGGCGATATTCCGGCGAATCTAGTGCGCTCCCTTCTCGGGTTGGGCGTGCCgg < 1:1903545/99‑1 (MQ=255) | GACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGG > NC_000913/4486192‑4486389 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |