New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4631875115 (1.110)7 (0.070) 4/166 NT 6.2% coding (1143/1938 nt) slt lytic murein transglycosylase, soluble
?NC_000913 = 4631889 105 (1.090)coding (1157/1938 nt) slt lytic murein transglycosylase, soluble
Rejected: Frequency below cutoff threshold.

Only 100 of 167 total aligned reads displayed.

GCGTTACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGC  >  NC_000913/4631776‑4631974
                                                                                                   |                                                                                                   
 cGTTACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGg                                                                                                    >  1:809267‑M2/1‑99 (MQ=255)
 cGTTACTGGCAGGCGGATTTATTGCTGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGgt                                                                                                   >  2:375972‑M2/1‑98 (MQ=255)
    tACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGgttg                                                                                                 >  1:65676‑M2/1‑96 (MQ=255)
    tACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGgttg                                                                                                 >  1:1148196‑M2/1‑96 (MQ=255)
    tACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGgttg                                                                                                 <  2:267554‑M2/100‑5 (MQ=255)
    tACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTATACCCGATGgttg                                                                                                 <  1:2686189‑M2/100‑5 (MQ=255)
     aCTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCTTGCAACAGCGTGGTTTCCACCCGATGgtttc                                                                                                >  2:1963347‑M2/1‑95 (MQ=255)
      cTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGgttgca                                                                                               >  1:2392183‑M2/1‑94 (MQ=255)
      cTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGgttgca                                                                                               >  1:2758090‑M2/1‑94 (MQ=255)
       tGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTgcag                                                                                              >  2:644190/1‑100 (MQ=255)
       tGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTgcag                                                                                              <  1:1570218/100‑1 (MQ=255)
        ggCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTgcagc                                                                                             >  1:2291309/1‑100 (MQ=255)
        ggCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTgcagc                                                                                             <  1:2655663/100‑1 (MQ=255)
            ggCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACaa                                                                                         >  2:94099/1‑100 (MQ=255)
             gCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAAc                                                                                        <  2:1310691/100‑1 (MQ=255)
              cGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACg                                                                                       <  2:488003/100‑1 (MQ=255)
              cGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACg                                                                                       >  1:95583/1‑100 (MQ=255)
              cGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACg                                                                                       <  1:2134084/100‑1 (MQ=255)
                gATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGca                                                                                     >  1:1521995‑M2/1‑98 (MQ=255)
                   ttATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGcatcg                                                                                  >  1:310630‑M2/1‑95 (MQ=255)
                    tATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGcatcgg                                                                                 <  2:2833068‑M2/100‑7 (MQ=255)
                      ttGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCg                                                                               <  2:53434/100‑1 (MQ=255)
                      tctcTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCg                                                                               <  1:2540826/97‑1 (MQ=255)
                        gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGcgttgtgctgcaaccatcgggtag                                                                             <  1:571616‑M1/100‑25 (MQ=255)
                        gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                             >  2:2227782/1‑100 (MQ=255)
                        gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                             >  1:1059532/1‑100 (MQ=255)
                        gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                             >  1:602796/1‑100 (MQ=255)
                        gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                             <  1:1119494/100‑1 (MQ=255)
                         cTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGcgttgtgctgcaaccatcgggtaga                                                                            <  2:2102735‑M1/100‑26 (MQ=255)
                         cTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaga                                                                            >  2:2540837/1‑98 (MQ=255)
                         cTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAag                                                                            <  1:642449/100‑1 (MQ=255)
                         cTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAag                                                                            >  1:2258216/1‑100 (MQ=255)
                          tGGACCGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAaga                                                                           <  2:2299734/100‑1 (MQ=255)
                          tGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAaga                                                                           >  1:516749/1‑100 (MQ=255)
                          tGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAaga                                                                           <  2:2460148/100‑1 (MQ=255)
                           ggAACGCGGACGCGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAagag                                                                          <  1:831618/100‑1 (MQ=255)
                                gcgGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGa                                                                     >  1:1443495/1‑100 (MQ=255)
                                  ggACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGc                                                                   <  2:1992270/100‑1 (MQ=255)
                                  ggACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGc                                                                   <  2:1534585/100‑1 (MQ=255)
                                       tgaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAg                                                              >  2:758325/1‑100 (MQ=255)
                                       tgaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAg                                                              >  1:1184310/1‑100 (MQ=255)
                                       tgaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAg                                                              >  2:2820370/1‑100 (MQ=255)
                                        gaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGa                                                             >  2:2779321/1‑100 (MQ=255)
                                         aagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGAt                                                            >  1:2256692/1‑100 (MQ=255)
                                           gctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTg                                                          >  1:2412245/1‑100 (MQ=255)
                                            ctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGa                                                         >  2:1886303/1‑100 (MQ=255)
                                            ctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGa                                                         <  1:1934912/100‑1 (MQ=255)
                                             tgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGAt                                                        <  2:1750241/100‑1 (MQ=255)
                                             tgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGAt                                                        <  2:1990887/100‑1 (MQ=255)
                                              gaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATa                                                       <  1:572779/100‑1 (MQ=255)
                                                agcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATaaa                                                     >  2:1396246/1‑100 (MQ=255)
                                                 gcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAg                                                    <  2:2157775/100‑1 (MQ=255)
                                                 gcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAg                                                    <  1:1888228/100‑1 (MQ=255)
                                                  cAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgc                                                   >  1:727766/1‑100 (MQ=255)
                                                   aaaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcg                                                  >  2:1674690/1‑100 (MQ=255)
                                                   aaaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcg                                                  >  1:2008930/1‑100 (MQ=255)
                                                   aaaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcg                                                  <  1:2060813/100‑1 (MQ=255)
                                                   aaaaGAGATTTTGCATCAACTCACGCAACAGCGTGGTGTCTACCCTATGGTTTCAGCACAACGCATCGGCGAAGAGTTTGTGCTGAAGATTGATAAGgcg                                                  <  1:1735424/100‑1 (MQ=255)
                                                    aaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcgc                                                 >  2:1808369/1‑100 (MQ=255)
                                                    aaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcgc                                                 <  2:2090676/100‑1 (MQ=255)
                                                     aaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGcgcc                                                <  1:845417/100‑1 (MQ=255)
                                                      agagATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGcgccg                                               >  2:1012772/1‑100 (MQ=255)
                                                        agaTTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCa                                             <  1:2128572/100‑1 (MQ=255)
                                                         gaTTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCa                                             <  1:1644167/99‑1 (MQ=255)
                                                                cATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTg                                     >  1:686509/1‑100 (MQ=255)
                                                                cATCAACTCATGCAACAGCGCGGTTTCTACCCGCTGGTTGCAGCACAACGCATCGGCGCAGAGTATGAGCTGAAGATTGAAAAACCGCCGCACAATGTTg                                     >  1:2229796/1‑100 (MQ=255)
                                                                 aTCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGa                                    >  1:2069656/1‑100 (MQ=255)
                                                                 aTCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGa                                    >  2:330314/1‑100 (MQ=255)
                                                                 aTCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGa                                    >  1:1587056/1‑100 (MQ=255)
                                                                  tCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGAc                                   <  2:2043183/100‑1 (MQ=255)
                                                                     aCTCATGCAACAGCGTGGTTTCTACCCGATGgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataaatccgcct                                <  2:2384713‑M2/100‑70 (MQ=255)
                                                                     aCTCATGCAACAGCGTGGTTTCTACCCGATGgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataaatccgcct                                <  2:2534480‑M2/100‑70 (MQ=255)
                                                                      cTCATGCAACAGCGTGGTTTCTACCCGATGgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataaatccgcctg                               <  1:1319743‑M2/100‑71 (MQ=255)
                                                                      cTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAgcg                               >  2:482001/1‑100 (MQ=255)
                                                                       tCATGCAACAGCGTGGTTTCTACCCGATGgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataaatccgcctgc                              <  1:10832‑M2/100‑72 (MQ=255)
                                                                        cATGCAACAGCGTGGTTTCTACCCGATGgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataaatccgcctgcc                             <  1:116977‑M2/100‑73 (MQ=255)
                                                                          tGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCt                           >  1:2432642/1‑100 (MQ=255)
                                                                           gCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCt                           <  1:492020/99‑1 (MQ=255)
                                                                           gCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTg                          >  2:1371559/1‑100 (MQ=255)
                                                                              aCAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACt                       >  1:2901929/1‑100 (MQ=255)
                                                                                        ttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCg              >  1:531235/1‑99 (MQ=255)
                                                                                        ttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGAATGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCgg             <  1:1474040/100‑1 (MQ=255)
                                                                                         tCTACCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccag            <  2:1454003‑M2/100‑76 (MQ=255)
                                                                                         tCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGga            <  1:2590282/100‑1 (MQ=255)
                                                                                          cTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCTTCCTGACTCAGGGGCCGgag           <  1:1378202/100‑1 (MQ=255)
                                                                                           tACCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagca          <  1:2536110‑M2/100‑78 (MQ=255)
                                                                                            aCCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaa         <  1:1632558‑M2/100‑79 (MQ=255)
                                                                                            aCCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaa         <  2:1587715‑M2/100‑79 (MQ=255)
                                                                                            aCCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaa         <  1:1124625‑M2/100‑79 (MQ=255)
                                                                                            aCCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGAt         >  2:1868602/1‑100 (MQ=255)
                                                                                              ccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATgg       <  1:2487670/100‑1 (MQ=255)
                                                                                              ccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATgg       <  1:2487967/100‑1 (MQ=255)
                                                                                              ccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATgg       >  2:1551797/1‑100 (MQ=255)
                                                                                               cGATGcgttgtgctgcaaccatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataa      >  1:310630‑M1/1‑5 (MQ=255)
                                                                                                gATGcgttgtgctgcaaccatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataaa     >  2:2393867‑M1/1‑4 (MQ=255)
                                                                                                gATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGgcg     <  2:471873/100‑1 (MQ=255)
                                                                                                  tGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGgcgcg   <  2:596074/100‑1 (MQ=255)
                                                                                                  tGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGgcgcg   <  2:2163295/100‑1 (MQ=255)
                                                                                                   ggTTGCAGCACAACGCATCGGCGACGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGgcgcgc  >  1:1249388/1‑100 (MQ=255)
                                                                                                   gcgttgtgctgcaaccatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataaatcc  <  1:2127794‑M1/100‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCGTTACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGC  >  NC_000913/4631776‑4631974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.