BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4631875	115 (1.110)	7 (0.070)	4/166	NT	6.2%	coding (1143/1938 nt)	slt	lytic murein transglycosylase, soluble
*	?	NC_000913	= 4631889	105 (1.090)	7 (0.070)	4/166	NT	6.2%	coding (1157/1938 nt)	slt	lytic murein transglycosylase, soluble
Rejected: Frequency below cutoff threshold.

Only 100 of 139 total aligned reads displayed.

CGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGAT  >  NC_000913/4631790‑4631988

cGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACg                                                                                                     >  1:95583/1‑100 (MQ=255)

 ggATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGc                                                                                                    <  1:2127794‑M2/100‑2 (MQ=255)

  gATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGca                                                                                                   >  1:1521995‑M2/1‑98 (MQ=255)

    tttATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGcatc                                                                                                 >  2:2393867‑M2/1‑96 (MQ=255)

     ttATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGcatcg                                                                                                >  1:310630‑M2/1‑95 (MQ=255)

      tATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGcatcgg                                                                                               <  2:2833068‑M2/100‑7 (MQ=255)

        ttGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCg                                                                                             <  2:53434/100‑1 (MQ=255)

        tctcTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCg                                                                                             <  1:2540826/97‑1 (MQ=255)

          gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                                           >  1:1059532/1‑100 (MQ=255)

          gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                                           >  1:602796/1‑100 (MQ=255)

          gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                                           <  1:1119494/100‑1 (MQ=255)

          gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                                           >  2:2227782/1‑100 (MQ=255)

           cTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaga                                                                                          >  2:2540837/1‑98 (MQ=255)

           cTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                                           <  1:158217/99‑1 (MQ=255)

           cTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAag                                                                                          <  1:642449/100‑1 (MQ=255)

           cTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAag                                                                                          >  1:2258216/1‑100 (MQ=255)

            tGGACCGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAaga                                                                                         <  2:2299734/100‑1 (MQ=255)

             ggAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAagag                                                                                        >  2:474268/1‑100 (MQ=255)

             ggAACGCGGACGCGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAagag                                                                                        <  1:831618/100‑1 (MQ=255)

                  gcgGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGa                                                                                   >  1:1443495/1‑100 (MQ=255)

                    ggACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGc                                                                                 <  2:1992270/100‑1 (MQ=255)

                    ggACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGc                                                                                 <  2:1456241/100‑1 (MQ=255)

                    ggACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGc                                                                                 <  2:2855084/100‑1 (MQ=255)

                    ggACGTGAAGCTGAAGCAAAAGAGAGTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGAGGGTTGCAGCACAACGCATCGGCGAGGAGTATGGGc                                                                                 >  1:1980963/1‑100 (MQ=255)

                         tgaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAg                                                                            >  2:135061/1‑100 (MQ=255)

                         tgaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAg                                                                            >  1:1184310/1‑100 (MQ=255)

                         tgaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAg                                                                            >  2:758325/1‑100 (MQ=255)

                          gaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGa                                                                           >  2:2779321/1‑100 (MQ=255)

                           aagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGAt                                                                          >  1:2256692/1‑100 (MQ=255)

                            agctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGAtt                                                                         <  2:2697624/100‑1 (MQ=255)

                             gctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTg                                                                        <  1:644189/100‑1 (MQ=255)

                              ctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGa                                                                       >  2:1886303/1‑100 (MQ=255)

                              ctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGa                                                                       <  1:1934912/100‑1 (MQ=255)

                               tgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGAt                                                                      <  2:1750241/100‑1 (MQ=255)

                               tgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGAt                                                                      <  1:205232/100‑1 (MQ=255)

                               tgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGAt                                                                      <  2:1990887/100‑1 (MQ=255)

                                  agcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATaaa                                                                   >  2:468631/1‑100 (MQ=255)

                                   gcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAg                                                                  <  1:1888228/100‑1 (MQ=255)

                                   gcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAg                                                                  <  1:1887926/100‑1 (MQ=255)

                                     aaaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcg                                                                >  2:1674690/1‑100 (MQ=255)

                                     aaaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcg                                                                <  1:2060813/100‑1 (MQ=255)

                                     aaaaGAGATTTTGCATCAACTCACGCAACAGCGTGGTGTCTACCCTATGGTTTCAGCACAACGCATCGGCGAAGAGTTTGTGCTGAAGATTGATAAGgcg                                                                <  1:1735424/100‑1 (MQ=255)

                                      aaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcgc                                                               <  2:2090676/100‑1 (MQ=255)

                                        agagATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGcgccg                                                             >  2:1012772/1‑100 (MQ=255)

                                        agagATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGcgccg                                                             <  1:544891/100‑1 (MQ=255)

                                         gagaTTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGcgccgc                                                            <  1:930168/100‑1 (MQ=255)

                                          agaTTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCa                                                           <  1:2128572/100‑1 (MQ=255)

                                           gaTTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCa                                                           <  1:1644167/99‑1 (MQ=255)

                                              tttGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAAt                                                       <  2:576124/100‑1 (MQ=255)

                                                  cATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTg                                                   <  1:1183691/100‑1 (MQ=255)

                                                  cATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTg                                                   >  2:1844071/1‑100 (MQ=255)

                                                  cATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTg                                                   >  1:686509/1‑100 (MQ=255)

                                                  cATCAACTCATGCAACAGCGCGGTTTCTACCCGCTGGTTGCAGCACAACGCATCGGCGCAGAGTATGAGCTGAAGATTGAAAAACCGCCGCACAATGTTg                                                   >  1:2229796/1‑100 (MQ=255)

                                                   aTCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGa                                                  >  2:330314/1‑100 (MQ=255)

                                                    tCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGAc                                                 >  2:644612/1‑100 (MQ=255)

                                                    tCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGAc                                                 <  2:2043183/100‑1 (MQ=255)

                                                     cAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACa                                                <  1:267552/100‑1 (MQ=255)

                                                        cTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAgcg                                             >  2:482001/1‑100 (MQ=255)

                                                            tGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCt                                         >  1:2432642/1‑100 (MQ=255)

                                                            tGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCt                                         >  1:420780/1‑100 (MQ=255)

                                                             gCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCt                                         <  1:492020/99‑1 (MQ=255)

                                                             gCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTg                                        >  2:1371559/1‑100 (MQ=255)

                                                             gCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTg                                        >  2:491047/1‑100 (MQ=255)

                                                              cAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGa                                       >  2:2062457/1‑100 (MQ=255)

                                                               aaCAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTCAAGATTGATAAAGCGACGCAGAATGTTGACAGCGCCCTCAc                                      <  1:2427424/100‑1 (MQ=255)

                                                                aCAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACt                                     <  1:1084179/100‑1 (MQ=255)

                                                                       ggTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGc                              >  1:2817890/1‑100 (MQ=255)

                                                                        gTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGcc                             >  1:742691/1‑100 (MQ=255)

                                                                          ttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCgg                           >  1:2382047/1‑100 (MQ=255)

                                                                          ttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCgg                           <  2:2258226/100‑1 (MQ=255)

                                                                          ttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCg                            >  1:531235/1‑99 (MQ=255)

                                                                          ttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGAATGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCgg                           <  1:1474040/100‑1 (MQ=255)

                                                                           tCTACCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccag                          <  2:1454003‑M2/100‑76 (MQ=255)

                                                                           tCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGga                          <  1:2590282/100‑1 (MQ=255)

                                                                            cTACCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagc                         <  1:571616‑M2/100‑77 (MQ=255)

                                                                            cTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCTTCCTGACTCAGGGGCCGgag                         <  1:1378202/100‑1 (MQ=255)

                                                                             tACCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagca                        <  1:2536110‑M2/100‑78 (MQ=255)

                                                                             tACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGgaga                        <  2:2509522/100‑1 (MQ=255)

                                                                             tACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGgaga                        >  1:213798/1‑100 (MQ=255)

                                                                              aCCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaa                       <  1:1632558‑M2/100‑79 (MQ=255)

                                                                              aCCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaa                       <  2:1587715‑M2/100‑79 (MQ=255)

                                                                              aCCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGAt                       >  2:1868602/1‑100 (MQ=255)

                                                                                ccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATgg                     <  1:2487967/100‑1 (MQ=255)

                                                                                ccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATgg                     <  1:2487670/100‑1 (MQ=255)

                                                                                ccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATgg                     <  1:2124669/100‑1 (MQ=255)

                                                                                ccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATgg                     >  2:1551797/1‑100 (MQ=255)

                                                                                    tGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGgcgcg                 <  2:2163295/100‑1 (MQ=255)

                                                                                    tGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGgcgcg                 <  1:30624/100‑1 (MQ=255)

                                                                                     ggTTGCAGCACAACGCATCGGCGACGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGgcgcgc                >  1:1249388/1‑100 (MQ=255)

                                                                                      gTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGcgcgcg               >  2:2651850/1‑100 (MQ=255)

                                                                                       ttGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGt              >  2:436704/1‑100 (MQ=255)

                                                                                          cagcaCAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTgcg           >  1:2743059/1‑100 (MQ=255)

                                                                                             cacaACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGa        >  2:2372564/1‑100 (MQ=255)

                                                                                               caACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGt      >  2:2111251/1‑100 (MQ=255)

                                                                                               caACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGt      >  2:1423854/1‑100 (MQ=255)

                                                                                               caACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGt      >  2:1557079/1‑100 (MQ=255)

                                                                                                aaCGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGtt     <  2:2134792/100‑1 (MQ=255)

                                                                                                  cGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGa   <  1:599015/100‑1 (MQ=255)

                                                                                                   gCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTTACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGa   <  1:386789/99‑1 (MQ=255)

                                                                                                   gCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGAt  >  1:2021294/1‑100 (MQ=255)

CGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGAT  >  NC_000913/4631790‑4631988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.