New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4635837 =115 (1.110)9 (0.090) 8/170 NT 8.1% coding (317/474 nt) creA putative periplasmic protein
?NC_000913 4635885 = 94 (0.950)coding (365/474 nt) creA putative periplasmic protein
Rejected: Frequency below cutoff threshold.

Only 100 of 150 total aligned reads displayed.

AGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGT  >  NC_000913/4635739‑4635936
                                                                                                  |                                                                                                   
aGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTTAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCaaa                                                                                                    <  2:2272078/100‑1 (MQ=255)
aGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCaaa                                                                                                    <  2:1846267/100‑1 (MQ=255)
 ggcatgacaggaaccgcgctaatcgcgtttttcggcgaaccttctacaactttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcataaa                                                                                                   >  1:2676985‑M1/98‑100 (MQ=255)
 gATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCaaaa                                                                                                   >  1:248399/1‑100 (MQ=255)
  gcatgacaggaaccgcgctaatcgcgttttttgtcgaatcttctacaactttgtcggagtaagccatataagcgagcgcgttgcgtatggcatcataca                                                                                                   <  1:1999665‑M1/3‑3 (MQ=255)
  gcatgacaggaaccgcgctaatcgcgtttttcggcgaaccttctacaactttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcataaaa                                                                                                  <  1:2472823‑M1/4‑1 (MQ=255)
     ccTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACg                                                                                               <  1:2351832/100‑1 (MQ=255)
       tCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCa                                                                                             >  1:1462712/1‑100 (MQ=255)
            tGCGGCCATTTCTTGTCAGCAAGTCGGGTCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTcc                                                                                        >  2:2020492/1‑100 (MQ=255)
              cGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCt                                                                                      >  1:2238034/1‑100 (MQ=255)
              cGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCt                                                                                      >  1:867727/1‑100 (MQ=255)
               ggCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTg                                                                                     >  1:1507344/1‑100 (MQ=255)
                gCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTgg                                                                                    <  2:197250/100‑1 (MQ=255)
                gCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTgg                                                                                    >  2:2711265/1‑100 (MQ=255)
                gCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTgg                                                                                    >  2:588879/1‑100 (MQ=255)
                gCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTgg                                                                                    >  2:1044570/1‑100 (MQ=255)
                gCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGGAGTATTCAAAAAACGCACGTCCCTgg                                                                                    >  1:714731/1‑100 (MQ=255)
                   aTTTCTTTTGAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAAc                                                                                                <  1:2524957/85‑1 (MQ=255)
                   aTTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGAAAAAAAAAAAAAAACGCACGTCCCTGGTCt                                                                                 <  1:1302449/100‑1 (MQ=255)
                    tttCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCtt                                                                                >  2:1945026/1‑100 (MQ=255)
                      tCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTa                                                                              >  2:216390/1‑100 (MQ=255)
                       cTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTaa                                                                             >  1:1298241/1‑100 (MQ=255)
                        ttGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAg                                                                            <  1:1012230/100‑1 (MQ=255)
                         tGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGt                                                                           <  2:483198/100‑1 (MQ=255)
                            cAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGt                                                                        >  1:2207545/1‑100 (MQ=255)
                            cAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGt                                                                        >  1:2167993/1‑100 (MQ=255)
                            cAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGt                                                                        <  2:1996606/100‑1 (MQ=255)
                            cAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGt                                                                        <  1:368290/100‑1 (MQ=255)
                             aGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGtt                                                                       <  2:186145/100‑1 (MQ=255)
                             aGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGtt                                                                       >  2:918825/1‑100 (MQ=255)
                              gCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTa                                                                      >  2:650795/1‑100 (MQ=255)
                                aaGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACa                                                                    <  1:2601267/100‑1 (MQ=255)
                                 cggcgaaccttctacaactttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcatAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAg                                                                   <  2:705368‑M1/35‑1 (MQ=255)
                                 aGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAACAGCACGTCCCTGGTCTTTAAGTCGTTACAg                                                                   >  1:800680/1‑100 (MQ=255)
                                 aGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAg                                                                   <  1:1014189/100‑1 (MQ=255)
                                  gTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAgg                                                                  <  2:1012855/100‑1 (MQ=255)
                                   tCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGt                                                                 <  2:2462592/100‑1 (MQ=255)
                                      ggCCGATTGAACTGTCGGATCGTATTAAAAACGGCAACGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGt                                                              >  1:1550586/1‑100 (MQ=255)
                                         cGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTgcg                                                           >  1:2752483/1‑100 (MQ=255)
                                          gATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTgcgc                                                          >  2:2388339/1‑100 (MQ=255)
                                            ttGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAGACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCtt                                                        <  2:2752493/100‑1 (MQ=255)
                                            ttGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCtt                                                        >  1:2760218/1‑100 (MQ=255)
                                             tGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCttt                                                       <  2:1603113/100‑1 (MQ=255)
                                              gAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCtttt                                                      >  2:2672771/1‑100 (MQ=255)
                                              gAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCtttt                                                      >  1:747529/1‑100 (MQ=255)
                                              gAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCtttt                                                      >  2:289519/1‑100 (MQ=255)
                                               aaCTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTa                                                     <  1:68240/100‑1 (MQ=255)
                                               aaCTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTa                                                     >  2:735178/1‑100 (MQ=255)
                                               aaCTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTa                                                     <  2:1310206/100‑1 (MQ=255)
                                                aCTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTat                                                    <  2:2238044/100‑1 (MQ=255)
                                                 cTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTatg                                                   <  2:1774136/100‑1 (MQ=255)
                                                 cTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTGTAAGTCGTTACAGGTCGTGCGCTTTTat                                                    >  1:1379796/1‑99 (MQ=255)
                                                 cTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGACTTTAAGTCGTTACAGGTCGTGCGCTTTTat                                                    >  1:1837750/1‑99 (MQ=255)
                                                  tGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTat                                                    <  2:1991402/98‑1 (MQ=255)
                                                   tttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcatAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTatgat                                                 >  1:705366‑M1/48‑100 (MQ=255)
                                                   tttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcatAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTatgat                                                 >  1:760503‑M1/48‑100 (MQ=255)
                                                    tCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTatgatg                                                <  1:368375/100‑1 (MQ=255)
                                                     tgtcggagtaagccagataagcgagcgcgttgcgtttggcatcatAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGc                                               >  1:735459‑M1/46‑100 (MQ=255)
                                                     cGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGc                                               <  1:885122/100‑1 (MQ=255)
                                                     cGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGc                                               >  1:1185494/1‑100 (MQ=255)
                                                     cGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTAAAGTCGTTACAGGTCGTGCGCTTTTATGATGc                                               <  1:2414369/100‑1 (MQ=255)
                                                      gtcggagtaagccagataatcgagcgcgttgcgtttggcatcatAAATACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGcc                                              >  1:937512‑M1/45‑100 (MQ=255)
                                                      ggATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGcn                                              <  2:1230326/100‑2 (MQ=255)
                                                      ggATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGcc                                              <  1:2711255/100‑1 (MQ=255)
                                                      ggATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGcc                                              >  2:215908/1‑100 (MQ=255)
                                                       tcggagtaagccagataagcgagcgcgttgcgtttggcatcatAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCa                                             >  2:365003‑M1/44‑100 (MQ=255)
                                                          cGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaac                                          >  2:119421/1‑100 (MQ=255)
                                                           gTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaac                                          >  2:2563388/1‑99 (MQ=255)
                                                            tATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgc                                        <  2:1921162/100‑1 (MQ=255)
                                                            tATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgc                                        >  2:2600351/1‑100 (MQ=255)
                                                            tATTAAAAACGGCAAAGCTCAGGGCGAAGTAGTATTCAAAAAACGAACGTCCCTGGCCAGTAAGTCGTTACAGGACGTGCGCTCTGATGATGCCAaacgc                                        >  1:1436517/1‑100 (MQ=255)
                                                              ttAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaa                                      >  1:2324775/1‑100 (MQ=255)
                                                                aaaaaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaac                                     >  2:2056036/1‑99 (MQ=255)
                                                                   aaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACgcgc                                 >  1:2607979/1‑100 (MQ=255)
                                                                     cGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctc                               >  2:2837447/1‑100 (MQ=255)
                                                                     cGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctc                               >  2:831176/1‑100 (MQ=255)
                                                                      tgCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctcg                              <  1:936877/99‑1 (MQ=255)
                                                                       gCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctcga                             >  2:936879/1‑99 (MQ=255)
                                                                        cAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctcgct                            >  2:307159/1‑100 (MQ=255)
                                                                             cTCAGAGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCCTGCGCTTTTATGATGCCAACCGCAACGCGCTCGCTTGTCt                       >  1:628465/1‑100 (MQ=255)
                                                                              tCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTg                      >  1:541289/1‑100 (MQ=255)
                                                                                aGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTAGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGc                    <  1:1969561/100‑1 (MQ=255)
                                                                                 gggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGc                    <  1:2400769/99‑1 (MQ=255)
                                                                                 gggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCt                   <  2:2736804/100‑1 (MQ=255)
                                                                                 gggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCt                   >  1:341358/1‑100 (MQ=255)
                                                                                 gggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCt                   >  2:649093/1‑100 (MQ=255)
                                                                                 gggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCt                   <  1:1215020/100‑1 (MQ=255)
                                                                                  ggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCtt                  <  2:1934301/100‑1 (MQ=255)
                                                                                       ggTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTcc             <  2:2387854/100‑1 (MQ=255)
                                                                                       ggTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTcc             >  1:2406182/1‑100 (MQ=255)
                                                                                        gtagtaTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCg            >  2:1567155/1‑100 (MQ=255)
                                                                                         tagtaTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGa           <  2:341360/100‑1 (MQ=255)
                                                                                            taTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACaa        <  2:2623110/100‑1 (MQ=255)
                                                                                             aTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACaaa       >  1:2800526/1‑100 (MQ=255)
                                                                                               tCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCACTCGCTTATCTGGCTTACTCCGACAAAGt     >  1:457328/1‑100 (MQ=255)
                                                                                                cAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGtt    >  2:56396/1‑100 (MQ=255)
                                                                                                cAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGATCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGtt    >  1:2535137/1‑100 (MQ=255)
                                                                                                 aaaaaaCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTg   <  2:1823234/100‑1 (MQ=255)
                                                                                                 aaaaaaCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTg   <  2:857065/100‑1 (MQ=255)
                                                                                                  AAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGt  <  2:1328437‑M1/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
AGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGT  >  NC_000913/4635739‑4635936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.