| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4637531 | 87 (0.840) | 9 (0.100) | 7/162 | NT | 9.5% | coding (836/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4637546 | 93 (0.990) | coding (851/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
Only 100 of 129 total aligned reads displayed.
TGCGCGTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACT > NC_000913/4637432‑4637630 | tGCGCGTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGA > 1:735965‑M1/1‑100 (MQ=255) gcgTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAAt < 2:1342291/100‑1 (MQ=255) gcgTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAAt < 2:2191790/100‑1 (MQ=255) gcgTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAAt < 1:473485/100‑1 (MQ=255) gTGAAGCTGGAAGGGAAAAACTATATGGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAAttt > 2:1767667/1‑100 (MQ=255) gatcttGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTa < 2:625769/95‑1 (MQ=255) tgCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAcg < 2:1262329/99‑1 (MQ=255) aGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAcg > 1:1390133/1‑100 (MQ=255) gCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAcgc < 2:1031609/100‑1 (MQ=255) gCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAcgc < 1:1920050/100‑1 (MQ=255) gCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAcga > 1:1262327/1‑99 (MQ=255) cTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAcgcg > 2:2796227/1‑100 (MQ=255) cTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAcgcg > 2:2088257/1‑100 (MQ=255) tGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTaagatc > 1:625768/1‑95 (MQ=255) ggAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGaa < 2:394012/100‑1 (MQ=255) gggAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGtc < 2:2795715‑M2/100‑3 (MQ=255) gggAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGtc < 2:768293‑M2/100‑3 (MQ=255) gggAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGtc < 2:2330172‑M2/100‑3 (MQ=255) ggAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGtc < 1:788578‑M2/99‑3 (MQ=255) gAAACACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGGGGAGCGGCGGAAATTATACGCGAAGGtccg < 1:2320559‑M2/100‑5 (MQ=255) aaaCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccg < 2:789958‑M1/100‑23 (MQ=255) aaCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccgc < 1:393769‑M1/100‑24 (MQ=255) aaCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACGGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgcc < 1:1870903‑M1/98‑22 (MQ=255) aCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgcc < 2:233730/100‑1 (MQ=255) cTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgccg < 2:26612/100‑1 (MQ=255) tataTTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCgg < 2:1570427/100‑1 (MQ=255) atatTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccgctcca < 1:1488689‑M1/100‑28 (MQ=255) atatTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGa < 2:247831/100‑1 (MQ=255) atatTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGa > 2:1006634/1‑100 (MQ=255) tatTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccgctccac < 2:2478754‑M1/100‑29 (MQ=255) atTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccgctccac < 1:2821073‑M1/99‑29 (MQ=255) atTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAg > 2:496834/1‑100 (MQ=255) atTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAg < 1:378947/100‑1 (MQ=255) tGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAccttcgcgtaaaatttccgccgctccacgaa < 2:2688455‑M1/100‑32 (MQ=255) tGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAgtg > 2:1866166/1‑100 (MQ=255) tGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAgtg > 1:1073868/1‑100 (MQ=255) tGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAgtg > 2:776806/1‑100 (MQ=255) gCAGTATGTTTACGCATTAACTTATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTAGGCGAAGGTCCGCCGCCGGAAgtggtg < 2:1767589/100‑1 (MQ=255) gCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAgtggtg < 2:582119/100‑1 (MQ=255) gCAGTATGTTTACGCATTAACTCATGAGCGAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAgtggtg < 1:690567/100‑1 (MQ=255) ccgatctttACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGc < 1:2393533/94‑1 (MQ=255) aGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGc > 1:243154/1‑100 (MQ=255) aGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGc < 2:123630/100‑1 (MQ=255) gTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCt > 1:111206/1‑100 (MQ=255) ngTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGt > 1:1719991/2‑100 (MQ=255) ttACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAGGTGGTGGCTCGtttt > 1:1826729/1‑100 (MQ=255) ttACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGcagatcgg > 2:2393544/1‑93 (MQ=255) aCGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGCTTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTAc < 1:859281/100‑1 (MQ=255) cGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACt > 1:969048/1‑100 (MQ=255) cGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACt < 2:2142707/100‑1 (MQ=255) cGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACt > 2:746128/1‑100 (MQ=255) gCATTAACTCATGGGCTAAAAAGCCCACTGTCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTg < 1:2014924/100‑1 (MQ=255) gCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTg > 2:663777/1‑100 (MQ=255) cATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTTGTGGAGCGGCGGAAATTCTACGCGAAGGTTCGCCGCCGGAAGTGGTGGCTCGTTTTACTGa > 1:138655/1‑100 (MQ=255) cATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGa > 1:2162868/1‑100 (MQ=255) aTTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGac > 2:155853/1‑100 (MQ=255) ttAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGaca > 1:1039631/1‑100 (MQ=255) ttAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGaca > 2:1815426/1‑100 (MQ=255) cATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTc < 1:1270699/100‑1 (MQ=255) tGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTg > 1:1494983/1‑100 (MQ=255) tGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTg < 2:2332629/100‑1 (MQ=255) gAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGa > 1:2548811/1‑100 (MQ=255) aGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGAc > 1:81727/1‑100 (MQ=255) aGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGAc > 1:1345822/1‑100 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGc < 2:2428948/100‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAAATTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGc > 1:1413481/1‑100 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAAATTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGc > 1:1414350/1‑100 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCCGCGAAAATTTTACGCGAAGGTCCGCCGCCGGGAGTAGTGGCTCGATTTACTGACAACATTCTGACGc > 1:1957232/1‑100 (MQ=255) aaaaaGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCaa > 1:1167512/1‑100 (MQ=255) ccACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATgcgc < 2:1758135/100‑1 (MQ=255) cTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTa > 2:1494161/1‑100 (MQ=255) cTGGCGGCGATTCGTGGAGCGGCGGAAATTTAACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTa > 2:1960306/1‑100 (MQ=255) ggcggcGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATg < 2:2569004/100‑1 (MQ=255) gcggcgATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGc < 1:2536212/100‑1 (MQ=255) gcgATTCGTGGGGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAgg < 2:2701455/100‑1 (MQ=255) gATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTATGACGCAAAATGCGCGTATGCAg > 1:2415354/1‑97 (MQ=255) aTTCGTGGAGCGGCGGAAATTTTACGCGAAGGtccgccgctccacgaatcgccgccagtgggctttttagctcatgtgttaatgcgtaaacatactgctc < 2:2601735‑M2/100‑69 (MQ=255) ttCGTGGAGCGGCGGAAATTTTACGCGAAGGtccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctca < 2:2688455‑M2/100‑70 (MQ=255) ttCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATTCAGGCa > 1:821532/1‑98 (MQ=255) gTGGAGCGGCGGAAATTTTACGCGAAGGtccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaata < 2:2478754‑M2/100‑73 (MQ=255) gTGGAGCGGCGGAAATTTTACGCGAAGGtccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaat < 1:2821073‑M2/99‑72 (MQ=255) gTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGt < 1:2686505/100‑1 (MQ=255) tGGAGCGGCGGAAATTTTACGCGAAGGtccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatat < 1:1488689‑M2/100‑74 (MQ=255) gAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGa < 2:2732717/100‑1 (MQ=255) aGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACCACCTTCTGACGCATAATGGGCGTTTGCAGGTATTGGTGGat > 2:1257424/1‑99 (MQ=255) gcggcgGAAATTTTACGCGAAGGtccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtt < 1:393769‑M2/100‑78 (MQ=255) cggcggAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAAc < 1:2569706/100‑1 (MQ=255) ggcggAAATTTTACGCGAAGGtccgccgctccacgaatcgcggccagtggtctttttagcccctgaggtaatacgtaaacatactgctcaatatagttt < 1:796481‑M2/99‑79 (MQ=255) ggcggAAATTTTACGCGAAGGtccgccgctccacgaatcgccgcccgtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtt < 1:1870903‑M2/98‑78 (MQ=255) cggAccttcgcgtataatttccgccgctccccgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtgtttc < 1:2320559‑M1/100‑97 (MQ=255) cggAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCCAAATGCGCGTATGCAGGCATTGGTAGAAACGtt < 2:1745557/100‑1 (MQ=255) cggAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGtt > 1:2591694/1‑100 (MQ=255) cggAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGtt > 1:775206/1‑100 (MQ=255) cggAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGtt < 2:755588/100‑1 (MQ=255) ggAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGtt < 1:2138171/99‑1 (MQ=255) gAccttcgcgtaaaatttccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtttttccc < 2:2795715‑M1/100‑99 (MQ=255) gAccttcgcgtaaaatttccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtttttccc < 2:2330172‑M1/100‑99 (MQ=255) gAccttcgcgtaaaatttccgccgctccacgaatcgccgccagtgggctttttagctcatgagttaatgcgtaaacatactgctcaatatagtttttcc < 1:788578‑M1/99‑98 (MQ=255) gAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTaagatcggaag > 2:2633257/1‑90 (MQ=255) aaaTTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTtact < 2:2415221/100‑1 (MQ=255) | TGCGCGTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACT > NC_000913/4637432‑4637630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |