New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 857633 =NA (NA)3 (0.030) 3/162 NT NA noncoding (18/98 nt) RIP79 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP79 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 4441401 = NA (NA)noncoding (9/98 nt) RIP335 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP335 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 121 total aligned reads displayed.

GCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCAT  >  NC_000913/857534‑857728
                                                                                                   |                                                                                               
tttgtctatgcctgatgcggcgtaaacgacttaccaggcctacaaaatcgtccaaattcaatatattgcaaggactgcgtaggcctgatcggcatagcgt                                                                                                 <  1:2782566‑M1/1‑1 (MQ=255)
gCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCtt                                                                                                 >  1:1237159/1‑100 (MQ=255)
 cGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTa                                                                                                <  1:381018/100‑1 (MQ=255)
   tagtaAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGAAGGAGGCTGATGACAAATGCAAAATAGCCTGATGCGCAATGCTTATc                                                                                              >  1:2617209/1‑100 (MQ=39)
    agtaAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCa                                                                                             >  1:2175541/1‑100 (MQ=255)
      taAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAgg                                                                                           <  2:2412058/100‑1 (MQ=255)
      taAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAgg                                                                                           >  1:992467/1‑100 (MQ=255)
      taAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAgg                                                                                           <  2:1237161/100‑1 (MQ=255)
       aaaGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGc                                                                                          <  1:2066691/100‑1 (MQ=255)
       aaaGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGc                                                                                          <  2:1262987/100‑1 (MQ=255)
        aaGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGcc                                                                                         <  2:880276/100‑1 (MQ=255)
          gggATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                       >  2:201335/1‑100 (MQ=255)
          gggATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                       >  1:779302/1‑100 (MQ=255)
           ggATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTAc                                                                                      <  2:779304/100‑1 (MQ=255)
             aTCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGc                                                                                    >  2:1670361/1‑100 (MQ=255)
             aTCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGc                                                                                    <  1:888535/100‑1 (MQ=255)
             aTCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGc                                                                                    >  2:1801638/1‑100 (MQ=255)
             aTCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGc                                                                                    <  2:2251740/100‑1 (MQ=255)
                gAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGt                                                                                 >  1:214822/1‑100 (MQ=255)
                gAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGt                                                                                 >  2:934528/1‑100 (MQ=255)
                  gTAAGTGATTATCCGTCACCCCGATACCGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTAc                                                                               <  2:115368/100‑1 (MQ=255)
                     aGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTg                                                                            <  2:2168627/100‑1 (MQ=255)
                      gTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGc                                                                           <  2:1569826/100‑1 (MQ=255)
                         aTTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAat                                                                        <  2:1766585/100‑1 (MQ=255)
                          ttATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatn                                                                       <  1:265109/100‑2 (MQ=255)
                          ttATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAata                                                                       <  1:1228157/100‑1 (MQ=255)
                            cgccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatat                                                                      >  1:880574/3‑99 (MQ=25)
                            aTCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatata                                                                     <  2:2434829/100‑1 (MQ=255)
                            aTCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatata                                                                     >  1:1698259/1‑100 (MQ=255)
                             tCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatatat                                                                    >  1:2801755/1‑100 (MQ=255)
                             gccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatatat                                                                    >  2:2689604/2‑100 (MQ=25)
                              ccGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATAtt                                                                   >  1:769543/1‑100 (MQ=255)
                                gTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGa                                                                 >  1:1270543/1‑100 (MQ=25)
                                  cACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAAt                                                               <  2:2494165/100‑1 (MQ=255)
                                    ccccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCt                                                             >  2:2761/1‑100 (MQ=255)
                                     cccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTg                                                            >  1:88695/1‑100 (MQ=255)
                                     cccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTg                                                            <  2:921848/100‑1 (MQ=255)
                                     cccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTg                                                            >  2:2281590/1‑100 (MQ=255)
                                     cccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTg                                                            >  2:870429/1‑100 (MQ=255)
                                      ccGATACTGTCGGGGTGACGGCGGCTGATGACTAATGCACAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGc                                                           <  1:2043802/100‑1 (MQ=255)
                                      ccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGc                                                           >  2:1560062/1‑100 (MQ=255)
                                       cGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCa                                                          <  2:545409/100‑1 (MQ=255)
                                       cGATACTGTCGGGGTGACGGCGGCTAAAAAAAAAAAAAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCa                                                          <  1:1479885/100‑1 (MQ=21)
                                       cGATACTGTCGGGGTGACGGCGACTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCa                                                          >  1:938402/1‑100 (MQ=255)
                                              gTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACttt                                                   >  2:1264811/1‑100 (MQ=255)
                                              gTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACt                                                     >  1:672125/1‑98 (MQ=255)
                                               tCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTg                                                  <  2:64225/100‑1 (MQ=255)
                                                cGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGt                                                 <  1:1393763/100‑1 (MQ=255)
                                                 ggggTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTa                                                >  1:596914/1‑100 (MQ=255)
                                                  gggTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAg                                               <  1:2119095/100‑1 (MQ=255)
                                                  gggTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAg                                               <  1:1658854/100‑1 (MQ=255)
                                                    gTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGc                                             >  1:1875377/1‑100 (MQ=255)
                                                      gACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCg                                           >  1:1324332/1‑100 (MQ=255)
                                                      gACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCg                                           <  1:1522175/100‑1 (MQ=255)
                                                        cggcggCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGcc                                            >  1:1444112/1‑97 (MQ=255)
                                                        cggcggCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCCTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGa                                         >  1:2020695/1‑100 (MQ=255)
                                                         ggcggcTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGa                                         <  2:2438022/99‑1 (MQ=255)
                                                           cggcTGATGACAAATGCAAAATAGCCTGATGCGCTACGGTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATaa                                      >  1:1798007/1‑100 (MQ=255)
                                                           cggcTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATaa                                      >  1:1546225/1‑100 (MQ=255)
                                                             gcTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAgg                                    <  1:2783001/100‑1 (MQ=255)
                                                             gcTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAgg                                    <  1:201333/100‑1 (MQ=255)
                                                               tgatgaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCg                                  <  1:2358079/100‑1 (MQ=255)
                                                               tgatgaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAAAATATTGAATCTGCATGACTTTGTAGGCCGGATAAGGCg                                  <  1:318733/100‑1 (MQ=255)
                                                                  tgaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTa                               >  2:2556171/1‑100 (MQ=255)
                                                                  tgaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTa                               >  1:86254/1‑100 (MQ=255)
                                                                  tgaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTa                               <  2:1828373/100‑1 (MQ=255)
                                                                   gaCAAATTCAAAATAGCCTGATGCGCTACCCTTATCAGACCTACGCAGTACCTGCAATATATCGTATCTGTATGATTTTGTAGGCCTGATAAGTCg                                  <  1:714843/96‑1 (MQ=18)
                                                                   gaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTaa                              >  1:2211839/1‑100 (MQ=255)
                                                                   gaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTaa                              >  1:40885/1‑100 (MQ=255)
                                                                    aCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAc                             >  1:1701255/1‑100 (MQ=255)
                                                                     cAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcg                            >  2:1131960/1‑100 (MQ=255)
                                                                     cAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcg                            >  2:2755830/1‑100 (MQ=255)
                                                                     cAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAc                             >  1:887663/1‑99 (MQ=255)
                                                                     cAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAAGCGTTAAcg                            >  1:2893247/1‑100 (MQ=255)
                                                                        aTGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcgccg                         >  2:2893308/1‑100 (MQ=255)
                                                                        aTGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcgccg                         >  2:914636/1‑100 (MQ=255)
                                                                         tGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcgccgc                        <  2:2316831/100‑1 (MQ=255)
                                                                          gCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGACGGATAAGGCGTTAAcgccgc                        >  2:579822/1‑99 (MQ=255)
                                                                           cAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCAt                      >  1:1089392/1‑100 (MQ=255)
                                                                           cAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCAt                      >  2:130346/1‑100 (MQ=255)
                                                                            aaaaTAGCCTGATGCGCTACGCTTATCAGGACTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCagc                     >  1:792997/1‑98 (MQ=255)
                                                                             aaaTAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCa                    >  2:1945930/1‑100 (MQ=255)
                                                                             aaaTAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCa                    >  2:1635172/1‑100 (MQ=255)
                                                                              aaTAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAg                   <  2:710748/100‑1 (MQ=255)
                                                                               taggcctgataagcgtagcgCATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAgg                  <  2:2754524‑M1/80‑1 (MQ=255)
                                                                                tAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCTGATGCGGCGTTAAcgccttatccggc                 <  2:1647523/100‑10 (MQ=21)
                                                                                 ggcctgataagcgtagcgCATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCa                <  1:1456607‑M1/82‑1 (MQ=255)
                                                                                  gCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCa                >  1:189629/1‑99 (MQ=255)
                                                                                  gCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCAt               >  1:2569012/1‑100 (MQ=255)
                                                                                  gCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCAt               <  1:2248103/100‑1 (MQ=255)
                                                                                   ccTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCAtt              <  2:2905158/100‑1 (MQ=255)
                                                                                    cTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCATGCATTa             <  1:933998/100‑1 (MQ=255)
                                                                                    cTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTa             >  1:2787943/1‑100 (MQ=255)
                                                                                      gATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAAc           >  1:2412185/1‑100 (MQ=255)
                                                                                       aTGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACa          <  2:2374102/100‑1 (MQ=255)
                                                                                       aTGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACa          >  2:300599/1‑100 (MQ=255)
                                                                                          cgcTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGGATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAg       >  1:1588291/1‑100 (MQ=255)
                                                                                           gcTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAgc      >  1:151831/1‑100 (MQ=255)
                                                                                               cGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCAt  >  1:1043645/1‑100 (MQ=255)
                                                                                               cGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCAt  >  2:949873/1‑100 (MQ=255)
                                                                                                   |                                                                                               
GCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCAT  >  NC_000913/857534‑857728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.