New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994981 (0.010)98 (0.990) 66/170 NT 99.5% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 113 total aligned reads displayed.

ATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG  >  NC_000913/1299405‑1299597
                                                                                             |                                                                                                   
atGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                               >  1:344819‑M1/1‑94 (MQ=255)
 tGTTATTTTCGCCACATCATAATCGTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCTACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                              <  1:1435885‑M1/100‑8 (MQ=255)
 ngtTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                              >  2:108815‑M1/2‑93 (MQ=255)
  gTTATTTTGGCCACCTCATAATCCTGGGCTTGCGGAAGAATAATCGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataat                                                                                             <  2:2297945‑M1/100‑9 (MQ=255)
  gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataat                                                                                             >  2:647276‑M1/1‑92 (MQ=255)
   ttATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAAAAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatc                                                                                            >  2:1266239‑M1/1‑91 (MQ=255)
     aTTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatca                                                                                           >  1:1374727‑M1/1‑89 (MQ=255)
        ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattg                                                                                       >  1:2704007‑M1/1‑86 (MQ=255)
        ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattg                                                                                       <  2:1566767‑M1/100‑15 (MQ=255)
        ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattg                                                                                       <  1:2295884‑M1/100‑15 (MQ=255)
        ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattg                                                                                       <  2:2646539‑M1/100‑15 (MQ=255)
        tatgccaCATCATAATCCTGGGCTCTCTGAACAATAATTGAAATAATATTATAAATTCCACTTCCTTTGGTAGAGGAAAGTGCTAAataataatcaattg                                                                                       <  1:2090541‑M1/97‑15 (MQ=255)
          cGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgtt                                                                                     <  1:2338582‑M1/100‑17 (MQ=255)
             cacaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaan                                                                                  <  2:620812‑M1/100‑20 (MQ=255)
              acaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaat                                                                                 <  1:704123‑M1/100‑21 (MQ=255)
              acaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaat                                                                                 <  2:567085‑M1/100‑21 (MQ=255)
              acaTAATAATGCTGGGCTTGCTGAAGAATAATGGAAATGATATTATTAATTACACTGACTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaa                                                                                  <  1:650598‑M1/99‑20 (MQ=255)
               catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatt                                                                                >  1:434156‑M1/1‑79 (MQ=255)
                atcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatta                                                                               >  2:1751670‑M1/1‑78 (MQ=255)
                 tcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattat                                                                              >  1:1820047‑M1/1‑77 (MQ=255)
                 tcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattat                                                                              >  2:2229821‑M1/1‑77 (MQ=255)
                   atAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattg                                                                            <  2:969774‑M1/100‑26 (MQ=255)
                    tAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgt                                                                           >  2:1374043‑M1/1‑74 (MQ=255)
                     aaTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatgaattgttaaattatt                                                                             >  1:1031701‑M1/1‑73 (MQ=255)
                     aaTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtg                                                                          <  2:153842‑M1/100‑28 (MQ=255)
                     aaTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtg                                                                          >  1:2783909‑M1/1‑73 (MQ=255)
                      aTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgc                                                                         <  2:1307553‑M1/100‑29 (MQ=255)
                       tCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgca                                                                        <  1:1716657‑M1/100‑30 (MQ=255)
                           gggCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttc                                                                    <  2:733476‑M1/100‑34 (MQ=255)
                             gCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                  <  1:282471‑M1/100‑36 (MQ=255)
                              cTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcact                                                                 >  2:968183‑M1/1‑64 (MQ=255)
                                tGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactac                                                               >  1:46549‑M1/1‑62 (MQ=255)
                                 gCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactact                                                              >  1:52614‑M1/1‑61 (MQ=255)
                                  cTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                             >  2:1194990‑M1/1‑60 (MQ=255)
                                  cTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                             <  2:2655626‑M1/100‑41 (MQ=255)
                                   tGAAGTATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                            <  1:1930938‑M1/100‑42 (MQ=255)
                                   tGAAGAATAATTGAAATGATATTATTAATTTCATTTTTTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                            <  1:36336‑M1/100‑42 (MQ=255)
                                   tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                            >  1:1333640‑M1/1‑59 (MQ=255)
                                   tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                            <  1:2300611‑M1/100‑42 (MQ=255)
                                   tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                            <  2:52615‑M1/100‑42 (MQ=255)
                                    gaagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgga                                                           >  2:1474531‑M1/1‑58 (MQ=255)
                                    gaagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgga                                                           >  2:2848255‑M1/1‑58 (MQ=255)
                                      agaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaac                                                         <  2:2276242‑M1/100‑45 (MQ=255)
                                        aataatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttaactaatggaactg                                                       >  1:2699371‑M1/1‑54 (MQ=255)
                                          taatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgta                                                     <  1:1828295‑M1/100‑49 (MQ=255)
                                            atTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaat                                                   >  2:970507‑M1/1‑50 (MQ=255)
                                            atTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaat                                                   >  1:2793721‑M1/1‑50 (MQ=255)
                                             ttGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                  >  1:2188833‑M1/1‑49 (MQ=255)
                                             ttGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                  <  1:189191‑M1/100‑52 (MQ=255)
                                              tGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttgaattattgtgcatttcactactggaactgtaatca                                                 <  2:609949‑M1/100‑53 (MQ=255)
                                               gAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactgctggaactgtaatcag                                                <  1:2307439‑M1/100‑54 (MQ=255)
                                                    gATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaag                                           <  2:622361‑M1/100‑59 (MQ=255)
                                                    gATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaa                                            >  1:90306‑M1/1‑42 (MQ=255)
                                                      tattatTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagat                                         >  1:1687517‑M1/1‑40 (MQ=255)
                                                      tattatTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagat                                         <  1:2647697‑M1/100‑61 (MQ=255)
                                                       attattAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                        <  1:994623‑M1/100‑62 (MQ=255)
                                                       attattAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataagcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                        >  1:1614293‑M1/1‑39 (MQ=255)
                                                        ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatag                                       <  2:142954‑M1/100‑63 (MQ=255)
                                                        ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatag                                       >  2:1231186‑M1/1‑38 (MQ=255)
                                                        ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatag                                       >  2:1877666‑M1/1‑38 (MQ=255)
                                                          attaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                     >  1:2702602‑M1/1‑36 (MQ=255)
                                                          attaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                     >  2:2081591‑M1/1‑36 (MQ=255)
                                                            taATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattagtgtgcatttcactactggaactgtaatcagaaaagatagacat                                   >  1:1865601‑M1/1‑34 (MQ=255)
                                                             aaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatg                                  >  1:898067‑M1/1‑33 (MQ=255)
                                                                tCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctt                               <  2:1820054‑M1/100‑71 (MQ=255)
                                                                  cACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttag                             >  2:2533446‑M1/1‑28 (MQ=255)
                                                                  cACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttag                             >  2:2411724‑M1/1‑28 (MQ=255)
                                                                  cACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttag                             >  2:2173809‑M1/1‑28 (MQ=255)
                                                                  cACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttag                             <  2:822695‑M1/100‑73 (MQ=255)
                                                                   aCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                            <  2:864491‑M1/100‑74 (MQ=255)
                                                                   aCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttag                             >  1:2030208‑M1/1‑27 (MQ=255)
                                                                    cTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagcc                           <  2:939337‑M1/100‑75 (MQ=255)
                                                                    cTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagcc                           >  1:1493117‑M1/1‑26 (MQ=255)
                                                                     tGCCTTTGGTAGTGGTAAGTTCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                            <  1:1668672‑M1/98‑74 (MQ=255)
                                                                            ggTAAAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctcta                   <  1:2630999‑M1/100‑83 (MQ=255)
                                                                             gTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctat                  >  2:1840569‑M1/1‑17 (MQ=255)
                                                                             gTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctat                  <  1:2174335‑M1/100‑84 (MQ=255)
                                                                              tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatt                 <  2:1139133‑M1/100‑85 (MQ=255)
                                                                               agagGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctattt                >  1:1897644‑M1/1‑15 (MQ=255)
                                                                                  ggAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgat             >  1:1931152‑M1/1‑12 (MQ=255)
                                                                                  ggAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga              >  1:1446486‑M1/1‑12 (MQ=255)
                                                                                   ggacgTGCTACGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGATTGTCCACTGGGGCCATAGCATCGGGGTCATCATGAGTCATGAACTCACCTTc            >  1:2523737/5‑100 (MQ=11)
                                                                                   gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgatt            <  2:2783919‑M1/100‑90 (MQ=255)
                                                                                   gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgatt            <  2:2789108‑M1/100‑90 (MQ=255)
                                                                                    aaaGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattg           <  2:344821‑M1/100‑91 (MQ=255)
                                                                                    aaaGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattg           <  1:1325286‑M1/100‑91 (MQ=255)
                                                                                       gTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaat        <  1:417027‑M1/100‑94 (MQ=255)
                                                                                        tGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaatt       >  1:2358852‑M1/1‑6 (MQ=255)
                                                                                         gCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattg      >  1:2367732‑M1/1‑5 (MQ=255)
                                                                                         gCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattg      >  2:1770832‑M1/1‑5 (MQ=255)
                                                                                          cTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattga     >  2:398490‑M1/1‑4 (MQ=255)
                                                                                          cTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattg      >  1:1284238‑M1/1‑4 (MQ=255)
                                                                                           tAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaa    >  2:1831220‑M1/1‑3 (MQ=255)
                                                                                           tAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaa    <  1:802736‑M1/100‑98 (MQ=255)
                                                                                           tAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaa    <  1:968181‑M1/100‑98 (MQ=255)
                                                                                            naataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaa   >  2:2266831‑M1/2‑2 (MQ=255)
                                                                                            aaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatggacatgcttagccaatctctatttgattgaattgaaa   <  1:1550763‑M1/100‑99 (MQ=255)
                                                                                             aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaacagatagacatgcttagccaatctctatttgattgaattgaaag  >  1:902448‑M1/1‑1 (MQ=255)
                                                                                             aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaag  <  2:635877‑M1/100‑100 (MQ=255)
                                                                                             aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaag  <  2:901449‑M1/100‑100 (MQ=255)
                                                                                             |                                                                                                   
ATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG  >  NC_000913/1299405‑1299597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.