New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994981 (0.010)98 (0.990) 66/170 NT 99.5% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 112 total aligned reads displayed.

GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAG  >  NC_000913/1300604‑1300796
                                                                                              |                                                                                                  
atgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagcggaaagtgctaaataata                                                                                               >  1:75373‑M2/95‑100 (MQ=255)
atgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataata                                                                                               >  1:344819‑M2/95‑100 (MQ=255)
 tgttattttcgccacatcataatcgtgggcttgctgaagaataattgaaatgatattattaattctactgcctttggtagaggaaagtgctaaataataa                                                                                              <  1:1435885‑M2/7‑1 (MQ=255)
 ngttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataa                                                                                              >  2:108815‑M2/94‑100 (MQ=255)
  gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataat                                                                                             >  1:2885504‑M2/93‑100 (MQ=255)
  gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataat                                                                                             >  2:647276‑M2/93‑100 (MQ=255)
   ttattttcgccacatcataatcctgggcttgctgaagaaaaattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATc                                                                                            >  2:1266239‑M2/92‑100 (MQ=255)
     attttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCa                                                                                           >  1:1374727‑M2/90‑99 (MQ=255)
      ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAt                                                                                         >  2:2022628‑M2/89‑100 (MQ=255)
        ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTg                                                                                       >  1:2704007‑M2/87‑100 (MQ=255)
        ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTg                                                                                       <  2:1566767‑M2/14‑1 (MQ=255)
        ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTg                                                                                       <  2:2646539‑M2/14‑1 (MQ=255)
        tatgccacatcataatcctgggctctctgaacaataattgaaataatattataaattccacttcctttggtagaggaaagtgctaaATAATAATCAATTg                                                                                       <  1:2090541‑M2/14‑1 (MQ=255)
          cgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGtt                                                                                     <  1:2338582‑M2/16‑1 (MQ=255)
             cacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTtaan                                                                                  <  2:620812‑M2/19‑2 (MQ=255)
              acatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAat                                                                                 <  1:704123‑M2/20‑1 (MQ=255)
              acatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAat                                                                                 <  2:567085‑M2/20‑1 (MQ=255)
              acataataatgctgggcttgctgaagaataatggaaatgatattattaattacactgactttggtagaggaaagtgctaaATAATAATCAATTGTTaaa                                                                                  <  1:650598‑M2/19‑1 (MQ=255)
                atcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAatta                                                                               >  2:1751670‑M2/79‑100 (MQ=255)
                 tcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattat                                                                              >  2:2229821‑M2/78‑100 (MQ=255)
                 tcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattat                                                                              >  1:1820047‑M2/78‑100 (MQ=255)
                   ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                            <  2:969774‑M2/25‑1 (MQ=255)
                     aatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATGAATTGTTAAattatt                                                                             >  1:1031701‑M2/74‑97 (MQ=255)
                     aatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtgtg                                                                          <  2:153842‑M2/27‑1 (MQ=255)
                     aatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtgtg                                                                          >  1:2783909‑M2/74‑100 (MQ=255)
                      atcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGc                                                                         <  2:1307553‑M2/28‑1 (MQ=255)
                       tcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCa                                                                        >  2:2509665‑M2/72‑100 (MQ=255)
                       tcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCa                                                                        <  1:1716657‑M2/29‑1 (MQ=255)
                             gcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCac                                                                  <  1:282471‑M2/35‑1 (MQ=255)
                              cttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCact                                                                 >  2:802738‑M2/65‑100 (MQ=255)
                              cttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCact                                                                 >  2:968183‑M2/65‑100 (MQ=255)
                                tgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactac                                                               >  1:46549‑M2/63‑100 (MQ=255)
                                 gctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactact                                                              >  1:52614‑M2/62‑100 (MQ=255)
                                  ctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                             >  2:1194990‑M2/61‑100 (MQ=255)
                                  ctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                             <  2:2655626‑M2/40‑1 (MQ=255)
                                   tgaagtataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                            <  1:1930938‑M2/41‑1 (MQ=255)
                                   tgaagaataattgaaatgatattattaatttcattttttttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                            <  1:36336‑M2/41‑1 (MQ=255)
                                   tgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                            <  2:52615‑M2/41‑1 (MQ=255)
                                   tgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                            >  1:1333640‑M2/60‑100 (MQ=255)
                                   tgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                            <  1:2300611‑M2/41‑1 (MQ=255)
                                    gaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGa                                                           >  2:2848255‑M2/59‑100 (MQ=255)
                                    gaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGa                                                           >  2:1474531‑M2/59‑100 (MQ=255)
                                      agaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAAc                                                         <  2:2276242‑M2/44‑1 (MQ=255)
                                        aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTAACTAATGGAACTg                                                       >  1:2699371‑M2/55‑100 (MQ=255)
                                          taattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTa                                                     <  1:1828295‑M2/48‑1 (MQ=255)
                                            attgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAAt                                                   >  2:970507‑M2/51‑100 (MQ=255)
                                            attgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAAt                                                   >  1:2793721‑M2/51‑100 (MQ=255)
                                             ttgaaatgatatttttaattccactgcctttggtagagaaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAAt                                                   >  1:1890682‑M2/50‑99 (MQ=255)
                                             ttgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATc                                                  >  1:2188833‑M2/50‑100 (MQ=255)
                                              tgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTGAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                 <  2:609949‑M2/52‑1 (MQ=255)
                                               gaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTGCTGGAACTGTAATCAg                                                <  1:2307439‑M2/53‑1 (MQ=255)
                                                    tccgatcttaattccactgcctttggtagaggaatgtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGGAATTAGAAAAg                                           <  1:1530369‑M2/58‑1 (MQ=255)
                                                    gatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAg                                           <  2:622361‑M2/58‑1 (MQ=255)
                                                    gatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAg                                           <  1:2565593‑M2/58‑1 (MQ=255)
                                                      tattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAt                                         >  1:1687517‑M2/41‑100 (MQ=255)
                                                      tattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAt                                         <  1:2647697‑M2/60‑1 (MQ=255)
                                                       attattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                        <  1:994623‑M2/61‑1 (MQ=255)
                                                       attattaattccactgcctttggtagaggaaagtgctaaATAATAAGCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                        >  1:1614293‑M2/40‑100 (MQ=255)
                                                        ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                       >  2:1231186‑M2/39‑100 (MQ=255)
                                                        ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                       <  2:434158‑M2/62‑1 (MQ=255)
                                                        ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                       <  2:142954‑M2/62‑1 (MQ=255)
                                                        ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                       >  2:1877666‑M2/39‑100 (MQ=255)
                                                          attaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAc                                     >  2:2081591‑M2/37‑100 (MQ=255)
                                                            taattccgctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCagaaaagagatcgga                                   >  2:1530373‑M2/35‑93 (MQ=255)
                                                            taattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTAGTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACAt                                   >  1:1865601‑M2/35‑100 (MQ=255)
                                                             aattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATg                                  >  1:898067‑M2/34‑100 (MQ=255)
                                                                tccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCtt                               <  2:1820054‑M2/70‑1 (MQ=255)
                                                                  cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                             <  2:822695‑M2/72‑1 (MQ=255)
                                                                  cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                             >  2:2533446‑M2/29‑100 (MQ=255)
                                                                  cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                             >  2:2411724‑M2/29‑100 (MQ=255)
                                                                  cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                             >  2:2173809‑M2/29‑100 (MQ=255)
                                                                   actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                             >  1:2030208‑M2/28‑99 (MQ=255)
                                                                   actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGc                            <  2:864491‑M2/73‑1 (MQ=255)
                                                                   actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGc                            <  1:2283628‑M2/73‑1 (MQ=255)
                                                                    ctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGcc                           <  2:939337‑M2/74‑1 (MQ=255)
                                                                    ctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGcc                           >  1:1493117‑M2/27‑100 (MQ=255)
                                                                    ctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGcc                           >  2:1093694‑M2/27‑100 (MQ=255)
                                                                     tgcctttggtagtggtaagttctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGc                            <  1:1668672‑M2/73‑1 (MQ=255)
                                                                            ggtaaaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTa                   <  1:2630999‑M2/82‑1 (MQ=255)
                                                                             gtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAt                  >  2:1840569‑M2/18‑100 (MQ=255)
                                                                             gtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAt                  <  1:2174335‑M2/83‑1 (MQ=255)
                                                                              tagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAtt                 <  2:1139133‑M2/84‑1 (MQ=255)
                                                                               agaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAttt                >  1:1897644‑M2/16‑100 (MQ=255)
                                                                                  ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat             >  1:1931152‑M2/13‑100 (MQ=255)
                                                                                  ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttga              >  1:1446486‑M2/13‑99 (MQ=255)
                                                                                   gaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgatt            <  2:2789108‑M2/89‑1 (MQ=255)
                                                                                   gaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgatt            <  2:2783919‑M2/89‑1 (MQ=255)
                                                                                    aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg           <  2:344821‑M2/90‑1 (MQ=255)
                                                                                    aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg           <  1:1325286‑M2/90‑1 (MQ=255)
                                                                                       gtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat        <  1:417027‑M2/93‑1 (MQ=255)
                                                                                        tgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaatt       >  1:2358852‑M2/7‑100 (MQ=255)
                                                                                         gctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattg      >  1:2367732‑M2/6‑100 (MQ=255)
                                                                                         gctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattg      >  2:1770832‑M2/6‑100 (MQ=255)
                                                                                          ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattg      >  1:1284238‑M2/5‑99 (MQ=255)
                                                                                           taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa    <  1:968181‑M2/97‑1 (MQ=255)
                                                                                           taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa    <  1:802736‑M2/97‑1 (MQ=255)
                                                                                            naATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa   >  2:2266831‑M2/3‑100 (MQ=255)
                                                                                             aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAACAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAg  >  1:902448‑M2/2‑100 (MQ=255)
                                                                                             aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAg  <  2:635877‑M2/99‑1 (MQ=255)
                                                                                             aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAg  <  2:901449‑M2/99‑1 (MQ=255)
                                                                                              |                                                                                                  
GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAG  >  NC_000913/1300604‑1300796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.