| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1432761 | NA (NA) | 8 (0.080) | 7/170 | NT | NA | coding (351/576 nt) | tfaR | Rac prophage; putative tail fiber assembly protein |
| ? | NC_000913 | = 1432785 | NA (NA) | coding (375/576 nt) | tfaR | Rac prophage; putative tail fiber assembly protein | |||||
TACCTGGTTATCGCCGGAAGGGGAGTTTCAGAAGTGGAACGGCACAGCCTGGGTGAAGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACAAAAAACAACCTGATGCAGGTAGCCAGTGAGCATATTGCGCCGCT > NC_000913/1432701‑1432850 | tagcTGGTTATCGCCGGAAGGGGAGTTTCAGAAGGGGAACGGCACAGCCTGGGTGAAGGATGCGGAAGCAGAAAAACTGTTCCGGATCCGGGAGTCGgaa < 1:1790826/97‑1 (MQ=1) cgacGGAAGGGGAGTTTCAGAAGTGGAACGGAACAGCCTGGGTGAAGGATAAGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGAGGAAGAAACaaaaaa < 1:2366701/97‑1 (MQ=1) gattttCAGAAGTGCACCGGCACAGCCTGGTTGAAGTATACGGAAGCAGAAAAACTGTTCCCGATCCCGCAGGCTGAAGAAACAAAAAACAACCTGATGc < 1:2247195/97‑1 (MQ=1) gagacggATACGGAACCAAAAAAAGTGTCCCGGTTCCGGGAGGAAAAAAAAAAAAAAAACAACCTGATGCAGGTAGCCAGTGAGCATATTGCGCCGCt < 1:199864/93‑1 (MQ=1) | TACCTGGTTATCGCCGGAAGGGGAGTTTCAGAAGTGGAACGGCACAGCCTGGGTGAAGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACAAAAAACAACCTGATGCAGGTAGCCAGTGAGCATATTGCGCCGCT > NC_000913/1432701‑1432850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |