BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3525557	NA (NA)	11 (0.120)	4/164	NT	NA	noncoding (80/98 nt)	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	= 3525568	NA (NA)	11 (0.120)	4/164	NT	NA	noncoding (91/98 nt)	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 157 total aligned reads displayed.

CTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAGGGT  >  NC_000913/3525469‑3525668

cTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGc                                                                                                      <  2:1914917/100‑1 (MQ=255)

cTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAAACCCATAAGCCTGATAAACATTGTGc                                                                                                      >  1:2168914/1‑100 (MQ=255)

 tttgggtagCCCGATACGGCGGAAATGCGTGAAGCGAGTAACAAGATCGTGAAAACTTAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCa                                                                                                     <  2:418320/92‑1 (MQ=255)

  tGTTTATGCCGGATACGGTGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCat                                                                                                    <  1:1117544‑M2/100‑3 (MQ=255)

    tttATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatca                                                                                                  <  1:820758‑M2/100‑5 (MQ=255)

     ttATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatcag                                                                                                 >  2:2764599‑M2/1‑95 (MQ=255)

      ttagccggataacgcgttcacgccgtatccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAgg                                                                                                >  1:28698‑M2/34‑100 (MQ=255)

       aTGCCGGATACGGGGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatcaggc                                                                                               <  1:1799569‑M2/100‑8 (MQ=255)

       aTGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatcaggc                                                                                               >  2:1758282‑M2/1‑93 (MQ=255)

        tGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggct                                                                                              >  1:1321274‑M2/1‑92 (MQ=255)

        tGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                                                                              >  1:1135633/1‑100 (MQ=255)

        tGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                                                                              >  1:794109/1‑100 (MQ=255)

        agccggataacgcgttcacgccgtatccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                                                                              >  2:1910002‑M2/32‑100 (MQ=255)

         gcgggATACGGCGTGAACGCGTTATCCGGTTACCAAATTCGTGAATTAGCAATAAGTGGCAGAAGGCCCATAGGCGTGACAAAGATTGTGCAGCAGGc                                                                                               <  1:2577724/95‑1 (MQ=255)

         gccggataacgcgttcacgccgtatccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                                                                              >  1:2269656‑M2/31‑99 (MQ=255)

            GGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAAc                                                                                           <  2:832787‑M1/99‑1 (MQ=255)

             gATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatgg                                                                                         >  1:143075‑M2/1‑87 (MQ=255)

             gATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatgg                                                                                         >  2:482896‑M2/1‑87 (MQ=255)

             gATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatgg                                                                                         >  1:284948‑M2/1‑87 (MQ=255)

             gATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatgg                                                                                         >  2:738324‑M2/1‑87 (MQ=255)

              aTACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatggg                                                                                        >  1:1875492‑M2/1‑86 (MQ=255)

              aTACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatggg                                                                                        >  2:1811231‑M2/1‑86 (MQ=255)

              ATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGGGAAACCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTc                                                                                        >  2:1629920‑M1/1‑100 (MQ=255)

                ACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCAc                                                                                      <  2:2298309‑M1/100‑1 (MQ=255)

                 cGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGGAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACg                                                                                     >  1:1300123/1‑100 (MQ=255)

                 cGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACg                                                                                     <  2:2156836/100‑1 (MQ=255)

                   gCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCa                                                                                   <  1:2728541/100‑1 (MQ=255)

                    cGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTAATAAACATTGTGCATCAGGCAAACTTCACGCa                                                                                   >  1:614485/1‑99 (MQ=255)

                    cGTGAACGCGTTATCCGGCTAACAAAATCGGGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatggg                                                                                        >  1:2222262‑M2/1‑80 (MQ=255)

                      tGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCAttt                                                                                >  2:224083/1‑100 (MQ=255)

                      tGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCAttt                                                                                <  2:779975/100‑1 (MQ=255)

                      tGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCAttt                                                                                <  1:1562494/100‑1 (MQ=255)

                        naCGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTac                                                                              >  2:1613107/2‑100 (MQ=255)

                        aaCGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAATCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTac                                                                              <  2:2687008/100‑1 (MQ=255)

                            cgTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTc                                                                          >  2:123517/1‑100 (MQ=255)

                               tatccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcc                                                                       <  1:728085‑M2/92‑1 (MQ=255)

                               tatccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcc                                                                       >  1:311368‑M2/9‑100 (MQ=255)

                                atccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGccc                                                                      <  1:1965860‑M2/93‑1 (MQ=255)

                                atccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGccc                                                                      <  2:1487173‑M2/93‑1 (MQ=255)

                                atccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGccc                                                                      <  2:262788‑M2/93‑1 (MQ=255)

                                  ccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTcgccctg                                                                    >  2:2007135‑M2/6‑98 (MQ=255)

                                   cggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACtcgccctgc                                                                   >  1:2828597‑M2/5‑97 (MQ=255)

                                   cggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACtcgccctgc                                                                   >  1:1407082‑M2/5‑97 (MQ=255)

                                    ggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACActcgccctgcc                                                                  >  2:2636554‑M2/4‑96 (MQ=255)

                                       tAACAAAATCGTGAAAACTCAATAAATTGCAGAAACAACATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCtt                                                              >  1:1900378/1‑100 (MQ=255)

                                         aCAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAATCATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTc                                                            <  2:2428673/100‑1 (MQ=255)

                                         aCAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCttt                                                             >  2:1278201/1‑100 (MQ=255)

                                         aCAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTc                                                            <  1:2282514/100‑1 (MQ=255)

                                         aCAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTc                                                            <  1:1659535/100‑1 (MQ=255)

                                          cAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCa                                                           <  1:1504816/100‑1 (MQ=255)

                                          cAAAATCGTGAAAACTCAATAAATTGCAGAAACACCATAAGCCTGATAAACATTGTACATCAGGCAAACTTCACCCATTTACAGTCGCCCCTGCCCTTTc                                                            >  2:2792329/1‑100 (MQ=255)

                                            aaaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAAc                                                         <  1:587857/100‑1 (MQ=255)

                                            aaaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAAc                                                         <  1:2396555/100‑1 (MQ=255)

                                                cGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCAtt                                                     >  2:2077541/1‑100 (MQ=255)

                                                 gTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTc                                                    >  2:399272/1‑100 (MQ=255)

                                                 gTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTc                                                    >  2:1027342/1‑100 (MQ=255)

                                                  tGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTc                                                    >  1:1222944/1‑100 (MQ=255)

                                                  tGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTc                                                    >  1:1177046/1‑100 (MQ=255)

                                                   gAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTcgc                                                  <  2:1438639/100‑1 (MQ=255)

                                                    aaaaCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTcgcg                                                 >  2:157768/1‑100 (MQ=255)

                                                       aCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCAc                                              >  2:653131/1‑100 (MQ=255)

                                                          cAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAg                                           >  2:186505/1‑100 (MQ=255)

                                                          cAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAg                                           <  1:1100067/100‑1 (MQ=255)

                                                           aaTAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGa                                            >  1:654361/1‑99 (MQ=255)

                                                            aTAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAgg                                          >  2:515721/1‑100 (MQ=255)

                                                             tAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGaa                                        >  1:418501/1‑100 (MQ=255)

                                                               aaTTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACa                                      >  2:1946345/1‑100 (MQ=255)

                                                                  tGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcg                                   <  1:2381425/100‑1 (MQ=255)

                                                                  tGCACAAACCCCATAAGCATGATAAACAGTGCGCAGCAGCCAAACTTCACGCATTCACACTCGCCCC‑GCCCTTTCCACCAGTCGCGCACGATAAACAgc                                    <  1:1813299/99‑1 (MQ=255)

                                                                   gCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcg                                   >  1:369675/1‑100 (MQ=255)

                                                                   gCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTGTCAACTATTCGCGCACGAGGAACAgcgc                                  >  1:2899463/1‑100 (MQ=255)

                                                                    cAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCa                                 <  1:515381/100‑1 (MQ=255)

                                                                      gAAACCCCATAAGCCTGATAAACATTGTGCATCAGACAAACTTCACGCATTTACAATCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCAc                                >  1:1004726/1‑99 (MQ=255)

                                                                        aaCCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGa                             >  1:850929/1‑100 (MQ=255)

                                                                           cccATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACAt                          >  1:231276/1‑100 (MQ=255)

                                                                           cccATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACAt                          <  1:2652923/100‑1 (MQ=255)

                                                                                aaGCCTGATAAACATTGTGCatcaggcttatggggtttctgcaatttattgagttttcacgattttgttagccggataacgcgttcacgccgtatcctgc                      <  1:2684523‑M2/100‑81 (MQ=255)

                                                                                aaGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgc                     <  1:1027340/100‑1 (MQ=255)

                                                                                  gCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgcgc                   >  2:835467/1‑100 (MQ=255)

                                                                                   ccTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCt                  >  1:1527495/1‑100 (MQ=255)

                                                                                   ccTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCt                  <  2:1944856/100‑1 (MQ=255)

                                                                                    cTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCt                  <  1:515720/100‑1 (MQ=255)

                                                                                    cTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCtt                 >  2:1898197/1‑100 (MQ=255)

                                                                                     tGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTc                <  2:2854322/100‑1 (MQ=255)

                                                                                       aTAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCAt              <  1:73623/100‑1 (MQ=255)

                                                                                        tAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCAtt             >  2:285608/1‑100 (MQ=255)

                                                                                        tAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCAtt             >  2:239831/1‑100 (MQ=255)

                                                                                        tAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCAtt             <  2:11272/100‑1 (MQ=255)

                                                                                         aaaCATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCGTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTg            <  1:1000868/100‑1 (MQ=255)

                                                                                          aaCATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGa           <  1:2823175/100‑1 (MQ=255)

                                                                                          aaCATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGa           >  1:1325432/1‑100 (MQ=255)

                                                                                          aaCATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGa           <  2:915058/100‑1 (MQ=255)

                                                                                           aCATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGac          >  1:1340222/1‑99 (MQ=255)

                                                                                           aCATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGaa          >  1:2513988/1‑100 (MQ=255)

                                                                                           aCATTGTGCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGaa          >  2:1433669/1‑100 (MQ=255)

                                                                                             aTTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAg         <  1:1620458/100‑1 (MQ=255)

                                                                                                  gCATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAggg   >  1:1049190/1‑100 (MQ=255)

                                                                                                   cATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAggg   <  2:689328/100‑1 (MQ=255)

                                                                                                   cATCAGGCAAACTTCACGCATTTACACTCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAGGGt  >  1:34370/1‑100 (MQ=255)

                                                                                                   cATCAGGCAAACTTCACGCATTTACACGCG‑CCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAGGGt  <  2:391103/100‑1 (MQ=255)

CTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAGGGT  >  NC_000913/3525469‑3525668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.