New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3908387 =NA (NA)9 (0.090) 5/164 NT NA noncoding (1/64 nt) REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3908412 = NA (NA)noncoding (26/64 nt) REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 152 total aligned reads displayed.

GAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG  >  NC_000913/3908313‑3908511
                                                                                                   |                                                                                                   
gAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCt                                                                                                     <  2:1461335/100‑1 (MQ=255)
  cgcctttttgactctgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtaaGCCTGATGCACTTCGCTAATCAGGCTTa                                                                                                   >  2:1845053‑M1/73‑100 (MQ=255)
  aGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTa                                                                                                   >  2:1712602/1‑100 (MQ=255)
  aGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTa                                                                                                   >  2:820730/1‑100 (MQ=255)
   gcctttttgactctgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtcaGCCTGATGCACTTCGCTAATCAGGCTTAc                                                                                                  >  1:1912637‑M1/72‑100 (MQ=255)
   gcctttttgactctgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtaaGCCTGATGCACTTCGCTAATCAGGCTTAc                                                                                                  >  1:399348‑M1/72‑100 (MQ=255)
   gcctttttgactccgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtaaGCCTGATGCACTTCGCTAATCAGGCTTAc                                                                                                  >  2:865618‑M1/72‑100 (MQ=255)
   gTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTAc                                                                                                  >  1:1482136/1‑100 (MQ=255)
     tCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCg                                                                                                <  1:2732053/100‑1 (MQ=255)
      cAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGt                                                                                               >  2:2123992/1‑100 (MQ=255)
      cAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGt                                                                                               >  1:781750/1‑100 (MQ=255)
      cAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGt                                                                                               >  2:2650357/1‑100 (MQ=255)
        aaTTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAg                                                                                             >  2:2702106/1‑100 (MQ=255)
        aaTTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAg                                                                                             >  1:2868067/1‑100 (MQ=255)
         aTTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAgg                                                                                            <  1:2293404/100‑1 (MQ=255)
         aTTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAgg                                                                                            <  2:2608522/100‑1 (MQ=255)
         aTTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAgg                                                                                            <  1:2054340/100‑1 (MQ=255)
           tACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGcc                                                                                          <  2:73521/100‑1 (MQ=255)
           tACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGcc                                                                                          >  2:2694064/1‑100 (MQ=255)
             cGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTAC‑‑TAGGCCGGAt                                                                                      <  2:45263/100‑1 (MQ=255)
                aCCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATc                                                                                     <  2:1209324/100‑1 (MQ=255)
                aCCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTGTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATc                                                                                     <  1:235006/100‑1 (MQ=255)
                 ccTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCa                                                                                    >  1:511153/1‑100 (MQ=255)
                 ccTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCa                                                                                    <  2:147221/100‑1 (MQ=255)
                 ccTGAATTTTACTCGGGACAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCa                                                                                    >  2:1367931/1‑100 (MQ=255)
                   tGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAgg                                                                                  >  1:1638615/1‑100 (MQ=255)
                     aaTTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATTAGGCTTACCGTAGGCCGGATCAGGCg                                                                                <  2:1771388/100‑1 (MQ=255)
                      aTTTTACTCGGGGCAGTTTCAACCATACTCATTTCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCg                                                                                >  1:2515741/1‑99 (MQ=255)
                       ttttACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGtt                                                                              <  2:2365627/100‑1 (MQ=255)
                        tttACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGAtgcggcgtga                                                                             <  1:1833237/100‑10 (MQ=255)
                            cTCGGGGCGGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgc                                                                         <  2:1433936/100‑1 (MQ=255)
                             tCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGtgaacgcc                                                                        <  1:68649/100‑8 (MQ=255)
                             tCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgcc                                                                        <  2:1851626/100‑1 (MQ=255)
                              cGGGGCAGTTTCAACCATACAAAAAACAATCTTTTCCTCATCGTGCCTGATGAAATTCGATAATCAAAATTACAGAACGCAGGATCaaccatcca                                                                            >  1:2307875/1‑87 (MQ=255)
                                  gCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATc                                                                   >  1:1721432/1‑100 (MQ=255)
                                      tttCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGc                                                               <  2:1431348/100‑1 (MQ=255)
                                      tttCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGc                                                               <  2:2610571/100‑1 (MQ=255)
                                       ttCAACCATACTCATTGCAATCTTTTCCTGATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAAGCGTTCACGCCGCATCCGGc                                                               >  1:1275040/1‑99 (MQ=255)
                                         cAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCaaa                                                            >  2:687421/1‑100 (MQ=255)
                                           aCCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAgt                                                          >  2:802544/1‑100 (MQ=255)
                                           aCCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAgt                                                          >  2:2792259/1‑100 (MQ=255)
                                             cATACTCATTGCAATCTTTTCCTCATCGTTCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCCGATCAGGCGTTCACGCCACATCCGGCAAAgtgt                                                        <  1:1750277/100‑1 (MQ=255)
                                             cATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAgtgt                                                        <  2:1847460/100‑1 (MQ=255)
                                              aTACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCGGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGtt                                                       <  1:1516108/100‑1 (MQ=255)
                                                 cTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAAc                                                    <  1:927870/100‑1 (MQ=255)
                                                 cTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAAc                                                    <  1:2435615/100‑1 (MQ=255)
                                                 cTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAAc                                                    <  1:1263716/100‑1 (MQ=255)
                                                  tCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAAcc                                                   <  2:2237297/100‑1 (MQ=255)
                                                  tCATTCCTATCGTTTCCTCATCGTGCCTGTTGTACTTCGCTAATCCGGCTTACCGTCGGTCGGATCAGGCGTTCGCGCCGCAGCCGGCAAGGTGTTAAc                                                    <  1:87957/99‑1 (MQ=25)
                                                   cATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCg                                                  <  1:2066504/100‑1 (MQ=255)
                                                      tGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCgtgt                                               <  2:266651/100‑1 (MQ=255)
                                                      tGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCgtgt                                               <  1:2792249/100‑1 (MQ=255)
                                                       gCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTa                                              <  1:2650346/100‑1 (MQ=255)
                                                        cAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTAc                                             >  2:1797043/1‑100 (MQ=255)
                                                        cAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTAc                                             >  2:394429/1‑100 (MQ=255)
                                                        cAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTAc                                             <  2:1493002/100‑1 (MQ=255)
                                                        cAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTAc                                             <  2:543256/100‑1 (MQ=255)
                                                         aaTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTAc                                             <  2:1308636/99‑1 (MQ=255)
                                                         aaTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACa                                            <  2:781752/100‑1 (MQ=255)
                                                          aTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACag                                           <  2:25767/100‑1 (MQ=255)
                                                          aTCTTTCCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACag                                           >  1:66661/1‑100 (MQ=255)
                                                            cTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACagag                                         <  1:2838393/100‑1 (MQ=255)
                                                             ttttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGt                                        <  1:2568501/100‑1 (MQ=255)
                                                                 ccTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaa                                    >  2:656381/1‑100 (MQ=255)
                                                                  cTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTGCCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGGGTACAGAGTCaaaa                                   >  1:726178/1‑100 (MQ=255)
                                                                   tCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaaaa                                  >  1:1400719/1‑100 (MQ=255)
                                                                   tCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaaaa                                  >  1:1248372/1‑100 (MQ=255)
                                                                     ggtaagcctgattagcgaagtgcatcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaaaa                                  >  2:1736940‑M2/31‑98 (MQ=255)
                                                                     ggtaagcctgattagcgaagtgcatcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCCGCAAAGTGTTAACCGTGTACAGGGTCaaaaa                                  >  1:645445‑M2/31‑98 (MQ=255)
                                                                     aTCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAgg                                <  2:549764/100‑1 (MQ=255)
                                                                      gtaagcctgattagcgaagtgcatcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACGGAGTCAAAAAGgc                               >  2:865618‑M2/30‑100 (MQ=255)
                                                                      gtaagcctgattagcgaagtgcatcaggcTGACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGgc                               >  1:1912637‑M2/30‑100 (MQ=255)
                                                                        aagcctgattagcgaagtgcatcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGgcgc                             >  1:2899056‑M2/28‑100 (MQ=255)
                                                                        aagcctgattagcgaagtgcatcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGgcgc                             >  1:2343552‑M2/28‑100 (MQ=255)
                                                                         tGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCt                            <  1:1593256/100‑1 (MQ=255)
                                                                          GCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGctn                           >  1:2531965‑M1/1‑99 (MQ=255)
                                                                          GCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtc                           <  2:1952723‑M1/100‑1 (MQ=255)
                                                                           cctgattagcgaagtgcatcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcg                          >  1:590555‑M2/25‑100 (MQ=255)
                                                                           CCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcg                          >  2:1076680‑M1/1‑100 (MQ=255)
                                                                              GATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcggtc                       <  2:959992‑M1/100‑1 (MQ=255)
                                                                                 gCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcggtcgg                     <  1:1051547/99‑1 (MQ=255)
                                                                                 gCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcggtcgg                     <  1:1051929/99‑1 (MQ=255)
                                                                                  cACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCggtcggtc                   >  2:2133978/1‑100 (MQ=255)
                                                                                  cACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCggtcggtc                   <  2:781981/100‑1 (MQ=255)
                                                                                  cACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCggtcggtc                   <  1:249245/100‑1 (MQ=255)
                                                                                   aCTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTcc                  <  2:1948449/100‑1 (MQ=255)
                                                                                   aCTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTcc                  <  1:2191831/100‑1 (MQ=255)
                                                                                      tCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCt               <  2:1589994/100‑1 (MQ=255)
                                                                                       cGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTc              >  1:262977/1‑100 (MQ=255)
                                                                                        gCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCg             >  2:64729/1‑100 (MQ=255)
                                                                                        gCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCg             >  2:432948/1‑100 (MQ=255)
                                                                                         cTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGc            <  1:2209998/100‑1 (MQ=255)
                                                                                          tAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGcc           <  2:1226249/100‑1 (MQ=255)
                                                                                          tAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGcc           <  2:2868078/100‑1 (MQ=255)
                                                                                           aaTCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGccc          >  2:1489262/1‑100 (MQ=255)
                                                                                            atcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGcccc         <  1:1563995‑M2/93‑1 (MQ=255)
                                                                                              caggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCctc       <  1:455857‑M2/95‑1 (MQ=255)
                                                                                               aggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCctct      >  1:764719‑M2/5‑100 (MQ=255)
                                                                                               aggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCctct      <  2:463719‑M2/96‑1 (MQ=255)
                                                                                                 gcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTgg    <  1:634442‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                   
GAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG  >  NC_000913/3908313‑3908511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.