BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1062411 =	NA (NA)	6 (0.060)	6/166	NT	NA	noncoding (5/134 nt)	REP91 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP91 (repetitive extragenic palindromic) element; contains 3 REP sequences
*	?	NC_000913	1062444 =	NA (NA)	6 (0.060)	6/166	NT	NA	noncoding (38/134 nt)	REP91 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP91 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 117 total aligned reads displayed.

CACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCATCCGGCAA  >  NC_000913/1062346‑1062542

caacgattacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCAt                                                                                                   >  1:2510503‑M1/66‑100 (MQ=255)

cACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCAt                                                                                                   <  2:2258341/100‑1 (MQ=255)

 aaagattacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCAtt                                                                                                  >  2:2627493‑M1/65‑100 (MQ=255)

  cTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACGGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCa                                                                                                    <  1:1233836/97‑1 (MQ=255)

  cTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTa                                                                                                 >  2:841284/1‑100 (MQ=255)

    aaGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCACATCAGGCATTATg                                                                                               <  2:2647182/100‑1 (MQ=255)

     attacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATgg                                                                                              >  2:749362‑M1/61‑100 (MQ=255)

     aGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCTGGCATTATgg                                                                                              <  2:57649/100‑1 (MQ=255)

     aGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATg                                                                                               >  1:1123662/1‑99 (MQ=255)

      gCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGgc                                                                                             >  2:159902/1‑100 (MQ=255)

        cAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGGTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCACGCATTATGgc                                                                                             >  1:1211205/1‑98 (MQ=255)

         aGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCa                                                                                          <  2:1795419/100‑1 (MQ=255)

         aGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCa                                                                                          >  2:2011436/1‑100 (MQ=255)

            tATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGtt                                                                                       >  2:378146/1‑100 (MQ=255)

                gCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCg                                                                                   >  1:492981/1‑100 (MQ=255)

                gCTGGTGTTAGTGGAGTGCGACCACAAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCg                                                                                   >  2:2343835/1‑100 (MQ=255)

                 cTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCgg                                                                                  <  1:2088746/100‑1 (MQ=255)

                   ggTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGAt                                                                                >  2:2625604/1‑100 (MQ=255)

                     tgtTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATgc                                                                              <  2:624242/100‑1 (MQ=255)

                           tGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTg                                                                        >  1:247382/1‑100 (MQ=255)

                           tGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTg                                                                        >  2:471381/1‑100 (MQ=255)

                              aGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAAc                                                                     <  2:1834193/100‑1 (MQ=255)

                              aGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAAc                                                                     >  1:1752205/1‑100 (MQ=255)

                               gTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACg                                                                    <  1:2515746/100‑1 (MQ=255)

                               gTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACg                                                                    <  2:425679/100‑1 (MQ=255)

                                 gCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTc                                                                  >  1:263124/1‑100 (MQ=255)

                                 gCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTc                                                                  >  2:1155706/1‑100 (MQ=255)

                                 gCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTc                                                                  <  2:741788/100‑1 (MQ=255)

                                  cGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCt                                                                 >  2:2446570/1‑100 (MQ=255)

                                  cGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCt                                                                 >  2:919780/1‑100 (MQ=255)

                                  cGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCt                                                                 >  2:2532867/1‑100 (MQ=255)

                                   taccaccAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCtt                                                                <  1:788195/99‑1 (MQ=255)

                                   gACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCtt                                                                <  2:655593/100‑1 (MQ=255)

                                   gACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCtt                                                                >  2:2629085/1‑100 (MQ=255)

                                    accaccAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTa                                                               >  2:788197/1‑100 (MQ=255)

                                         caAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTAGGGCGCAGTTGCCGGAGGCGGCGTGAACGTCTTAtac                                                            >  1:2218704/1‑96 (MQ=255)

                                          aaaaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGc                                                         >  2:2357320/1‑100 (MQ=255)

                                          aaaaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGc                                                         >  1:778897/1‑100 (MQ=255)

                                          aaaaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGc                                                         <  1:1929877/100‑1 (MQ=255)

                                          aaaaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGc                                                         >  2:1789629/1‑100 (MQ=255)

                                          aaaaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGc                                                         >  2:1705040/1‑100 (MQ=255)

                                           aaaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGcc                                                        <  2:1580942/100‑1 (MQ=255)

                                             aCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCgg                                                          >  1:2263594/1‑96 (MQ=255)

                                              cAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCcac                                                     <  2:1336684/100‑1 (MQ=255)

                                                gATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAg                                                   <  2:1792561/100‑1 (MQ=255)

                                                gATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAg                                                   >  2:1684874/1‑100 (MQ=255)

                                                     cgtcgtTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACt                                              >  2:454947/1‑100 (MQ=255)

                                                     cgtcgtTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACt                                              >  2:367896/1‑100 (MQ=255)

                                                      gtcgtTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTg                                             <  2:778899/100‑1 (MQ=255)

                                                       tcgtTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGt                                            <  1:842741/100‑1 (MQ=255)

                                                          ccataatgcctgatgcgacgctaaacgcgtcttttcaggcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAAt                                         >  2:749362‑M2/41‑100 (MQ=255)

                                                             gtgCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCtt                                      >  1:1749355/1‑100 (MQ=255)

                                                               gcgcCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTg                                    <  2:1266315/100‑1 (MQ=255)

                                                               gcgcCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGACGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTg                                    <  2:1239421/100‑1 (MQ=255)

                                                               atgcctgatgcgacgctaaacgcgtcttttcaggcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCGTTg                                    >  1:2510503‑M2/36‑100 (MQ=255)

                                                                cgcCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGt                                   <  1:724877/100‑1 (MQ=255)

                                                                cgcCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGt                                   >  2:636088/1‑100 (MQ=255)

                                                                cgcCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGt                                   <  2:2592762/100‑1 (MQ=255)

                                                                cgcCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGt                                   <  2:2478272/100‑1 (MQ=255)

                                                                 gcctgatgcgacgctaaacgcgtcttttcaggcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTg                                    >  1:1680244‑M2/34‑98 (MQ=255)

                                                                 GCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTa                                  >  2:440850‑M1/1‑100 (MQ=255)

                                                                 GCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTa                                  >  2:1919619‑M1/1‑100 (MQ=255)

                                                                 GCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTa                                  >  1:2629074‑M1/1‑100 (MQ=255)

                                                                  CCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAg                                 >  2:776024‑M1/1‑100 (MQ=255)

                                                                  CCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAg                                 >  2:776120‑M1/1‑100 (MQ=255)

                                                                  CCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAg                                 >  2:607602‑M1/1‑100 (MQ=255)

                                                                    TGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGAc                               <  2:1118492‑M1/100‑1 (MQ=255)

                                                                     gatgcgacgctaaacgcgtcgcatcaggcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGAcc                              >  1:2818605‑M2/30‑100 (MQ=255)

                                                                      AAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCg                             <  2:291351‑M1/100‑1 (MQ=255)

                                                                      AAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCg                             >  2:2460706‑M1/1‑100 (MQ=255)

                                                                       tgcgacgctaaacgcgtcttttcaggcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCgg                            >  1:600834‑M2/28‑100 (MQ=255)

                                                                        aaGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGt                           <  1:185151/100‑1 (MQ=255)

                                                                         aGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGtt                          <  2:2025432/100‑1 (MQ=255)

                                                                          gACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTCGTAGACCGGTTa                         <  2:1911148/100‑1 (MQ=255)

                                                                            cgcgTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAg                       >  2:2710674/1‑100 (MQ=255)

                                                                            cgcgTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAg                       >  2:1510624/1‑100 (MQ=255)

                                                                             gcgTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGa                      <  1:695794/100‑1 (MQ=255)

                                                                             gcgTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGa                      <  2:2797988/100‑1 (MQ=255)

                                                                               gTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATg                    <  2:930018/100‑1 (MQ=255)

                                                                               gTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATg                    <  1:1077754/100‑1 (MQ=255)

                                                                               gTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATg                    <  2:2013647/100‑1 (MQ=255)

                                                                               ccgatctgTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATg                    <  1:1330782/93‑1 (MQ=255)

                                                                                tttAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGc                   <  2:120436/100‑1 (MQ=255)

                                                                                 tcaGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCg                  <  2:1503432/98‑1 (MQ=255)

                                                                                 cttccgatctaTCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCg                  <  1:598346/90‑1 (MQ=255)

                                                                                   aGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCg                  <  1:2610066/98‑1 (MQ=255)

                                                                                         gCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCa          <  2:1272634/100‑1 (MQ=255)

                                                                                          cATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCAt         >  2:2777060/1‑100 (MQ=255)

                                                                                          cATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCAt         >  1:518189/1‑100 (MQ=255)

                                                                                           aTCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGAGATCggaag        >  2:598347/1‑96 (MQ=255)

                                                                                             caggcATTATTGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCATCCg      <  2:2610361‑M2/95‑1 (MQ=255)

                                                                                               ggcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACGGGTTAAGATGCGTCATCGCATCCGGc    <  1:2625593‑M2/97‑1 (MQ=255)

                                                                                               ggcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCATCCGGc    <  1:227549‑M2/97‑1 (MQ=255)

                                                                                               ggcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCATCCGGc    >  1:2057879‑M2/4‑100 (MQ=255)

                                                                                               ggcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCATCCGGc    <  2:1956740‑M2/97‑1 (MQ=255)

                                                                                               ggcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCATCCGGc    >  2:825677‑M2/4‑100 (MQ=255)

                                                                                               ggcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCATCCGGc    <  1:2710664‑M2/97‑1 (MQ=255)

                                                                                                gcATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCATCCGGCa   >  1:82833‑M2/3‑100 (MQ=255)

                                                                                                 cATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCATCCGGCaa  >  2:2405747‑M2/2‑100 (MQ=255)

                                                                                                 cATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCATCCGGCaa  >  1:367962‑M2/2‑100 (MQ=255)

CACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTAGACCGGTTAAGATGCGTCATCGCATCCGGCAA  >  NC_000913/1062346‑1062542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.