| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1134653 | NA (NA) | 7 (0.070) | 5/164 | NT | NA | noncoding (68/98 nt) | RIP100 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP100 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 3598495 | NA (NA) | noncoding (99/99 nt) | RIP259 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP259 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
Only 100 of 150 total aligned reads displayed.
TGCCTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGCCAGTCA > NC_000913/3598396‑3598594 | tGCCTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC > 2:433648‑M2/1‑100 (MQ=255) tctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacgccttATCCGGc > 2:1217052‑M1/93‑99 (MQ=255) gCCTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTGTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa > 1:1735338/1‑100 (MQ=255) ccTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAt > 2:1896857/1‑100 (MQ=255) tcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatGCCGGATAAGGCGTTTACGCCGCATCCGGCATg > 1:1881319‑M1/68‑100 (MQ=255) tcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgggatcgttggtcatgccggataaggcgtttacgccgcATCCGGCAt > 1:622326‑M1/91‑99 (MQ=255) cTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATg > 1:1364154/1‑100 (MQ=255) cTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATg > 2:604540/1‑100 (MQ=255) tGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGa > 2:2579173/1‑100 (MQ=255) gATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGaa < 1:1332657/100‑1 (MQ=255) gATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGaa > 1:2152225/1‑100 (MQ=255) aTGCGCTACGCTTATCATGTCTACAATGTGTGTTGAAATTTACTGATTTCTTTGCATCTTGTAGGACGGATAAGGCGTTTACGCCGCCTCCGGCATGaa < 1:1150498/99‑1 (MQ=37) aTGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAg < 1:233336/100‑1 (MQ=255) gcacTACGCTTATCAGGTCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGc < 2:1576511/96‑1 (MQ=255) gcTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAAc < 1:2556754/100‑1 (MQ=255) gcTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAAc > 2:722433/1‑100 (MQ=255) cTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACg > 2:2655248/1‑100 (MQ=255) aCGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAAAGTa > 1:397434/1‑100 (MQ=255) cGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTAc > 2:2375863/1‑100 (MQ=255) gCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACt > 1:1391265/1‑100 (MQ=255) gCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATACGGCATGAAGCAACGTACt > 2:966511/1‑100 (MQ=255) cTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTc < 2:2062255/100‑1 (MQ=255) tATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGa > 1:294818/1‑100 (MQ=255) aTCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGat > 1:2593171/1‑100 (MQ=255) cAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGatat > 1:1815671/1‑100 (MQ=255) aGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATAtt < 2:1715268/100‑1 (MQ=255) ggCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTa < 2:1604100/100‑1 (MQ=255) ggCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTa < 1:1186533/100‑1 (MQ=255) ggCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTGGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACCTACGCGATAtt < 1:1528145/99‑1 (MQ=255) cTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAATCAACGTACTCGATATTAGcn < 1:1773837/100‑2 (MQ=255) cTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCa > 1:330966/1‑100 (MQ=255) gtgtgtTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTggc < 2:1092028/100‑1 (MQ=255) gtgtTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTggcgg < 1:511192/100‑1 (MQ=255) tgtTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTggcggc > 2:153209/1‑100 (MQ=255) gtTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCa > 2:1667085/1‑100 (MQ=255) ttGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCaa > 1:50144/1‑100 (MQ=255) ttGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCaa > 2:1340014/1‑100 (MQ=255) gCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAAcc < 1:1477359/100‑1 (MQ=255) aTTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCaa > 1:619263/1‑100 (MQ=255) cTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAg > 1:2094628/1‑97 (MQ=255) cTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTg > 2:106921/1‑100 (MQ=255) gATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGcc > 2:2794374/1‑100 (MQ=255) gATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGcc < 2:1427665/100‑1 (MQ=255) gATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGcc > 1:2407037/1‑100 (MQ=255) aTTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCg > 2:829673/1‑100 (MQ=255) aTTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCg > 2:2234000/1‑100 (MQ=255) aTTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCg < 1:106920/100‑1 (MQ=255) cTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTa > 1:830629/1‑100 (MQ=255) tttGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCCTCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTaa > 1:121920/1‑100 (MQ=255) tttGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTaa < 1:781957/100‑1 (MQ=255) tGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATg > 1:1209029/1‑100 (MQ=255) ggATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGa > 2:1797767/1‑100 (MQ=255) ggATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGa > 1:2822372/1‑100 (MQ=255) ggATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGa > 1:2030517/1‑100 (MQ=255) ggATCTTGTAGGCCGGATAACGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGa > 1:1780652/1‑100 (MQ=255) gATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGAt < 1:2749412/100‑1 (MQ=255) gATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGAt > 2:667085/1‑100 (MQ=255) cTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcat < 1:1437060‑M2/100‑64 (MQ=255) tGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACtt > 1:2101415/1‑100 (MQ=255) tGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACtt > 2:145630/1‑100 (MQ=255) tcatgccggatgcggcgtaaacgccttATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTc < 1:341508‑M1/73‑1 (MQ=255) catgccggatgcggcgtaaacgccttATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTc < 2:2165233‑M1/73‑1 (MQ=255) atgccggatgcggcgtaaacgccttATCCGGCATGAAGCAAAGTACTCGATATTAGCAATTCGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGc < 1:1587646‑M1/75‑1 (MQ=255) atgccggatgcggcgtaaacgccttATCCGGCATGAAGCAAAGTACTCGATATTAGCAATTAGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGc < 1:1587699‑M1/75‑1 (MQ=255) aGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacaagtgctcgcaaaatagataaattgcgattgcccccatagacccgataaacttgcgcatcggg < 2:150318‑M2/99‑68 (MQ=255) aGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGc > 2:1459043/1‑100 (MQ=255) aGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGc > 2:1787111/1‑100 (MQ=255) aGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGc > 2:1564587/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCa > 2:101248/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCa < 1:805457/100‑1 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCa > 1:1083560/1‑100 (MQ=255) ggCCGGATAAGGCGCTTACGCCGCATCCGGCATGAAGCAACGTACTCGATAATAGCAATCTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGc > 1:2068532/1‑99 (MQ=255) GCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCAt > 1:2549508‑M1/1‑100 (MQ=255) GCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCAt < 2:1591829‑M1/100‑1 (MQ=255) GCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCAt < 2:68097‑M1/100‑1 (MQ=255) cGGATAAGGCGTTTACGCCGCATCCGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaact < 1:2210702‑M2/100‑73 (MQ=255) ggATAAGGCGTTTACGCCGCATCCGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaactt < 2:2582948‑M2/100‑74 (MQ=255) ggATAAGGCGTTTACGCCGCATCCGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaactt < 1:334367‑M2/100‑74 (MQ=255) GGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCgg < 2:711663‑M1/100‑1 (MQ=255) GGATAAGGCGTTTACGACGCATCAGTCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCAt > 2:2753109‑M1/1‑97 (MQ=255) aaGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgc < 1:711661/100‑1 (MQ=255) ggCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGTAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccg > 1:1409604/1‑100 (MQ=255) ggCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccg > 1:732310/1‑100 (MQ=255) ggCGTTTACGCCGCATCCGGCATGAACCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAATTTGCCGATTAATGATTACTTCGCATCGGTc > 1:2743344/1‑96 (MQ=255) gTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGTAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtgc < 2:1409606/100‑1 (MQ=255) tACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtgccgt > 2:580626/1‑100 (MQ=255) gccgcATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTgg < 1:2579162/100‑1 (MQ=255) gccgcATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTgg < 1:2157576/100‑1 (MQ=255) gcATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGt < 2:1186646/100‑1 (MQ=255) cATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTg > 1:1109081/1‑100 (MQ=255) aTCCGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatccttt > 2:2121391‑M2/1‑7 (MQ=255) ATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGc > 2:1364156‑M1/1‑100 (MQ=255) ccGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatcctttca < 1:1738101‑M2/100‑96 (MQ=255) CCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGCCa > 2:1195525‑M1/1‑100 (MQ=255) CCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGCCa < 1:2421470‑M1/100‑1 (MQ=255) cGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgctaaacttgcgcatcgggcaacttatacttgtcatgtatcctttcaa < 2:931360‑M2/100‑97 (MQ=255) CGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGCCAg > 2:12107‑M1/1‑100 (MQ=255) ggCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatcctttcaat > 2:826411‑M2/1‑3 (MQ=255) cctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatcctttcaatta < 1:1024921‑M2/100‑100 (MQ=255) CATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGCCAGTCa > 1:153208‑M1/1‑100 (MQ=255) | TGCCTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGCCAGTCA > NC_000913/3598396‑3598594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |