Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 2,462,889 (C)9→12 intergenic (+243/‑123) fadL → / → yfdF long‑chain fatty acid outer membrane transporter/uncharacterized protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 246288021 (0.180)109 (0.860)
+CCC
66/174 0.7 83.6% intergenic (+234/‑132) fadL/yfdF long‑chain fatty acid outer membrane transporter/uncharacterized protein
?NC_000913 2462881 = 21 (0.160)intergenic (+235/‑131) fadL/yfdF long‑chain fatty acid outer membrane transporter/uncharacterized protein

Only 100 of 125 total aligned reads displayed.

AAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2462783‑2462880
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATAT  >  NC_000913/2462881‑2462977
                                                                                                  |||||                                                                                                  
AAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑C                                                                                                     <  1:1910921/100‑1
AAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑C                                                                                                     <  1:2187190/100‑1
 AGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CC                                                                                                    <  2:2112212/100‑1
 AGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CC                                                                                                    >  2:2215121/1‑100
 AGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑C                                                                                                     >  1:1047929/1‑99
  GCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCC                                                                                                   >  1:2985626/1‑100
     GTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CC                                                                                               <  1:2256946/100‑1
         CCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCC                                                                                           >  2:2414966/1‑100
          CACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCCGGATACT‑T‑TCCC‑CCCC                                                                                             >  1:3638/1‑97
          CACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CTCC‑CCCCCC                                                                                           >  1:384042/1‑99
           ACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATCCT‑C‑CC                                                                                                    >  2:2102160/1‑90
             AGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCtggc                                                                                       <  1:125223/100‑5
             AGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCtggc                                                                                       <  1:124673/100‑5
             AGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGG                                                                                       <  1:3154249/100‑1
               ACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCctggc                                                                                     <  1:169438/100‑6
               ACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAACAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTA                                                                                    <  2:806768/100‑1
                  AACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCAC‑CCCCCCTTGctctcc                                                                                  >  1:2838432/1‑94
                   ACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑CTCCCC‑CCCCCCCTTGCTATT                                                                                  >  2:11172/1‑100
                     CTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTTCCTATTtt                                                                                >  2:417391/1‑97
                     CTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATT                                                                                  >  1:1924084/1‑96
                      TGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCTCCTTGccattgtt                                                                                >  2:646243/1‑90
                      TGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCCATTGTGC                                                                              >  1:1635985/1‑100
                      TGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTtttc                                                                              >  2:279513/1‑95
                       GAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGC                                                                            <  1:646252/100‑1
                        AAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGC                                                                            <  2:1939469/100‑1
                        AAGGGAAAGGCATATTTTCAGGCGTTCTGCCCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGC                                                                            <  1:3243152/100‑1
                          GGGAAAGGCATATTTTCCGGCGTTCTGCTCGTCCTTCTCAAAGCGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCT                                                                           <  2:1723830/99‑1
                           GGAAAGGGATTTTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCA                                                                         <  1:458190/100‑1
                           GGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTCCTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCA                                                                         <  2:2869741/100‑1
                            GAAAGGCATATTTTCAGGCTTTCTTCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCAT                                                                        <  2:3242236/100‑1
                              AAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACA                                                                     >  2:1798361/1‑100
                               AGGCAAATTTTCAGGCCTTCTGCCCCTCCTTCCCAAAGAGTTTACTTTTCTGCATTTCCCGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACA                                                                     <  1:1095074/100‑1
                                      TTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAAT                                                              <  1:2840378/100‑1
                                       TTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATT                                                             <  1:2562028/100‑1
                                       TTTCAGGCGTTCTGCTCGTCCTTCTCAAAAGGTTTACTTTTCTGCATTTCCAGGATACCCC‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACT                                                                   <  2:636292/95‑1
                                         TCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAA                                                          <  1:3108539/100‑1
                                          CAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTCTTTTTCGCTCATACAACTAAATTAAA                                                          >  1:2899880/1‑100
                                          CAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTTTGCGCCCATACACTCAAATTAAA                                                          >  1:2671261/1‑100
                                          CAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAA                                                          <  1:807380/100‑1
                                           atGCGTTATGCTCGCCCTTCCCAAAGAGTTTACTTTTCTGTATTTCCCGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAA                                                          <  2:1506685/96‑1
                                           AGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAG                                                         <  1:2493669/100‑1
                                           AGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAG                                                         <  2:1525232/100‑1
                                            GGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAA                                                           >  1:2073194/1‑97
                                                 TCTGTTTGTCCTTCTCAAACAGTTTTCTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGTCTATTGTGCGCTCATACACTCAAATTAAAG                                                         <  2:2840472/93‑1
                                                 TCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGTCGTTGAGCGCTCATCCACTCAAATTAAAGATAGGT                                                   >  1:2449114/1‑100
                                                    GCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTCTTTTGCCCTCATACCCTCAAATTAAAGATAGGTT                                                  >  2:2321261/1‑98
                                                    GCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTTTTCCCTCATACACTCAAATTAAAGATAGGTTCTA                                               >  2:1220021/1‑100
                                                         TCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATA                                           <  1:1009401/100‑1
                                                          CCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAAT                                            <  1:187656/98‑1
                                                           CTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAA                                         <  1:1829562/100‑1
                                                           CTTCCCAAAGAGTTTACTTTTCTGCATTTCCCGGAAACC‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAATTTAAAGATAGGTTCTAAATAAA                                         <  2:1891747/100‑1
                                                            TTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGTTATTGTGCGCTCATATACTCAAATTAAAGATAGGTTCTAATTAAAT                                        >  2:1542808/1‑100
                                                             TCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATG                                       <  2:207721/100‑1
                                                             TCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATCGGTTCTAAATAAA                                         <  2:2023012/97‑1
                                                              CTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTAGCTATTGTTCGCTCATCCACTCAATTTAAAGATAGGTTCTAAACAAATaa                                      >  1:1452433/1‑98
                                                               TCAAAGAGTTTACTTTTCTGCATTTCCAGGATCCT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGC                                    <  1:3133396/100‑1
                                                               TCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAG                                     <  1:740867/100‑1
                                                                CAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTTGCTATTGTTCCCTCATACCCTCACATTAAAGATTGGTTCTCAATAAATGAG                                     >  2:504842/1‑99
                                                                CAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCGATTTTGCGCTCATACACTCAAATTAAAGATAGGTTTTAAATAAACGAGC                                    >  1:1288680/1‑100
                                                                CAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGC                                    <  2:782977/99‑1
                                                                CAAAGAGCTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTTCTCTCATACACTCAAATTAAAGTTAGGTTCTAAATAAAT                                        >  1:1721781/1‑95
                                                                 AAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCG                                   <  1:48580/100‑1
                                                                  AAGAGTTTACTTTTCTGCATTTCCAGGATAAT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCG                                   <  2:2208316/99‑1
                                                                     AGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTT                              <  1:1000556/100‑1
                                                                      GTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTTGCTATTTTTCCCTCATACCCTCAAATTAAAGATAGGTTCTAAAAAAATGAGCGTTTT                               >  2:3076555/1‑99
                                                                        tttCTTTTCTGCATTTCCAACATTCA‑C‑CCCCACCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTT                             <  2:2825274/97‑1
                                                                           CTTTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAT                          <  1:3025437/99‑1
                                                                            TTTTCTTCATTTCCAGGATTCT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGA                           <  2:2355162/97‑1
                                                                             TTTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGT                       <  1:1919775/100‑1
                                                                              TTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTTTTCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGTTAGTt                      >  2:1235943/1‑99
                                                                              TTCTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTC                      <  1:1465061/100‑1
                                                                                CTGCATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTTTGCGCCCATACACTCAAATTAAAGATAGGTTCTAAATAAATAAGCGTTTTTTGA                           >  2:3101006/1‑93
                                                                                CTGCATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAACATGAGTTCTAAATAAATGAGCCTTTTTTGATAGTC                      >  1:2318980/1‑97
                                                                                  GCATTTCCCGGATAAT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATT                  <  2:1426126/100‑1
                                                                                   CATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTT                 <  1:1589711/100‑1
                                                                                   CATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGGTTTTGTGCGCTCATACACTCAAATTAAAGCTAGGTTCTAAATAAATGAGCGTTTTTTGATAATCAATTTC                >  2:2698682/1‑100
                                                                                   CATTTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTCCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTC                >  1:2299155/1‑100
                                                                                    ATTTCCAGGATTCT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATT                  <  2:3091045/97‑1
                                                                                    ATTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTC                <  1:930506/100‑1
                                                                                     TTTCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCA               <  1:2780847/100‑1
                                                                                      TTCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCTCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATT             <  2:810766/100‑1
                                                                                      TTCCAGGATACC‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT              <  2:2073168/100‑1
                                                                                       TCCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATT             <  2:84165/100‑1
                                                                                       TCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGTTATTCTATTT                 >  2:2856778/1‑95
                                                                                       TCCAGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTA            <  2:2503273/100‑1
                                                                                        CCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACCCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTA            >  2:1673434/1‑100
                                                                                        CCAGGATACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACCCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATT             >  1:2004565/1‑99
                                                                                          AGGATACT‑‑‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGT         <  2:1115353/100‑1
                                                                                            ggactccC‑CCCC‑CCCCCCCTGGCTATTGTGCGTTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAG           <  1:2102186/91‑1
                                                                                            GATACTCC‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGT         <  1:2914573/100‑1
                                                                                            GATACC‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAG           <  1:1157912/97‑1
                                                                                               ACT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATA     <  1:2329946/100‑1
                                                                                                ctcC‑CCCC‑CCCCCCCTGGCTATTGTTCGCTCATACACCCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAAT      >  2:1923657/4‑99
                                                                                                accC‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATA     <  1:526577/97‑1
                                                                                                CT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATAT    >  1:3178149/1‑100
                                                                                                CT‑C‑CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATAT    >  1:487946/1‑100
                                                                                                 tactCCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATA     <  1:279519/96‑1
                                                                                                   ctCCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATA   >  1:383022/3‑100
                                                                                                   ctCCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATA   >  1:21298/3‑100
                                                                                                     CCCC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATAT  <  2:1651648/99‑1
                                                                                                  |||||                                                                                                  
AAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2462783‑2462880
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CC‑CCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATAT  >  NC_000913/2462881‑2462977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.