Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 2,462,889 (C)9→12 intergenic (+243/‑123) fadL → / → yfdF long‑chain fatty acid outer membrane transporter/uncharacterized protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 246288021 (0.180)109 (0.860)
+CCC
66/174 0.7 83.6% intergenic (+234/‑132) fadL/yfdF long‑chain fatty acid outer membrane transporter/uncharacterized protein
?NC_000913 2462881 = 21 (0.160)intergenic (+235/‑131) fadL/yfdF long‑chain fatty acid outer membrane transporter/uncharacterized protein

Only 100 of 139 total aligned reads displayed.

AAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑‑‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTA  >  NC_000913/2462783‑2462971
                                                                                                 |                                                                                                  
aaGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcc                                                                                                  <  1:2187190‑M1/100‑3 (MQ=255)
 aGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccc                                                                                                 >  2:1589694‑M1/1‑97 (MQ=255)
 aGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccc                                                                                                 >  2:2215121‑M1/1‑97 (MQ=255)
 aGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccc                                                                                                 <  2:2112212‑M1/100‑4 (MQ=255)
 aGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcc                                                                                                  >  1:1047929‑M1/1‑97 (MQ=255)
   cGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccc                                                                                               >  1:2355189‑M1/1‑95 (MQ=255)
     gTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACtttcctcc                                                                                             >  1:2696896/1‑93 (MQ=255)
         ccACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccc                                                                                         >  1:609741‑M1/1‑89 (MQ=255)
         ccACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccc                                                                                         >  2:740859‑M1/1‑89 (MQ=255)
          cacaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCCGGATACTttccccccc                                                                                           >  1:3638‑M1/1‑88 (MQ=255)
          cacaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcctcccccccc                                                                                         >  1:384042‑M1/1‑88 (MQ=255)
           acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATCCTccc                                                                                                 >  2:2102160‑M1/1‑87 (MQ=255)
             aaataaacctgAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccct                                                                                        <  1:2774797‑M1/93‑13 (MQ=255)
             aGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggc                                                                                     <  1:125223‑M1/100‑16 (MQ=255)
             aGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctgg                                                                                     <  1:3154249‑M1/100‑16 (MQ=255)
               aCAAACCTGAAGGGGAAGGGATTTTTTTGGGCGGTCTGCTCGCCCTTCTCCAAGAATTTACTTTTCTGCATTTCCAGGATTCT‑‑‑cccc‑‑‑ccccccccctggc                                                                             <  2:2619767/100‑9 (MQ=255)
               aCAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccccctggc                                                                                   <  1:169438‑M1/100‑18 (MQ=255)
               aCAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAACAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggcta                                                                                   <  2:806768‑M1/100‑18 (MQ=255)
                  aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccacccccccttgctctcc                                                                                >  1:2838432‑M1/1‑80 (MQ=255)
                    ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctcgctattgtc                                                                              >  1:1651697‑M1/1‑78 (MQ=255)
                     cTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctatt                                                                                 >  1:1924084‑M1/1‑77 (MQ=255)
                     cTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccccttcctatttt                                                                              >  2:417391‑M1/1‑77 (MQ=255)
                      tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccctccttgccattgtt                                                                              >  2:646243‑M1/1‑76 (MQ=255)
                      tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctatttttc                                                                             >  2:279513‑M1/1‑76 (MQ=255)
                      tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggccattgtgc                                                                            >  1:1635985‑M1/1‑76 (MQ=255)
                       gAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctattgtgcgc                                                                           <  1:646252‑M1/100‑26 (MQ=255)
                       gAAGGAAAAGGTATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTTCTTTTCTGCATTTCCAGGATTCTC‑‑CCCC‑‑‑CCCCCTGGCTATtgtg                                                                          <  2:3159636/96‑1 (MQ=255)
                        aaGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgc                                                                          <  2:1939469‑M1/100‑27 (MQ=255)
                        aaGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑‑‑CCCCCTGGCTATTGTGCGCTCa                                                                   <  2:1592011/100‑1 (MQ=255)
                        aaGGGAAAGGCATATTTTCAGGCGTTCTGCCCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgc                                                                          <  1:3243152‑M1/100‑27 (MQ=255)
                          ttccgatctatattttcaggcgTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctattgtgcgctca                                                                        <  1:1878174‑M1/91‑29 (MQ=255)
                           ggAAAGGGATTTTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctca                                                                       <  1:458190‑M1/100‑30 (MQ=255)
                           ggAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctca                                                                       <  1:1323965‑M1/100‑30 (MQ=255)
                            gAAAGGCATATTTTCAGGCTTTCTTCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcat                                                                      <  2:3242236‑M1/100‑31 (MQ=255)
                            gAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccttggtattgtgcgctcct                                                                       >  1:2894240‑M1/1‑70 (MQ=255)
                             aaaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑CCCC‑‑‑CCCCCTGGCTATTGTGCGCTCATac                                                                <  1:2417202/99‑1 (MQ=255)
                              aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctattgtgcgctcataca                                                                    >  2:1798361‑M1/1‑68 (MQ=255)
                               aGGCAAATTTTCAGGCCTTCTGCCCCTCCTTCCCAAAGAGTTTACTTTTCTGCATTTCCCGGATACTcccccccccccctggctattgtgcgctcataca                                                                   <  1:1095074‑M1/100‑34 (MQ=255)
                                   atatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctattttgccctcaagatcggaa                                                               >  2:1878151‑M1/1‑63 (MQ=255)
                                   atatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑‑‑CCCCCTGGCTATTGTGCGCTCATCCACTCAAAt                                                        >  1:754953/1‑100 (MQ=255)
                                       tttCAGGCGTTCTGCTCGTCCTTCTCAAAAGGTTTACTTTTCTGCATTTCCAGGATACCccccccccccccctggctattgtgcgctcatacact                                                                <  2:636292‑M1/95‑37 (MQ=255)
                                         tCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctattgtgcgctcatacactcaaattaaa                                                         <  1:3108539‑M1/100‑44 (MQ=255)
                                          cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctattgtgcgctcatacactcaaattaaag                                                        >  2:2371217‑M1/1‑56 (MQ=255)
                                          cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctctttttcgctcatacaactaaattaaa                                                        >  1:2899880‑M1/1‑56 (MQ=255)
                                          cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattttgcgcccatacactcaaattaaa                                                        >  1:2671261‑M1/1‑56 (MQ=255)
                                          cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcatacactcaaattaaa                                                        <  1:807380‑M1/100‑45 (MQ=255)
                                           atgcgTTATGCTCGCCCTTCCCAAAGAGTTTACTTTTCTGTATTTCCCGGATACTccccccccccctggctattgtgcgctcatacactcaaattaaa                                                         <  2:1506685‑M1/96‑44 (MQ=255)
                                           aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcatacactcaaattaaag                                                       <  2:1525232‑M1/100‑46 (MQ=255)
                                           aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcatacactcaaattaaag                                                       <  1:2493669‑M1/100‑46 (MQ=255)
                                            ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcatacactcaaattaa                                                         >  1:2073194‑M1/1‑54 (MQ=255)
                                               gTTCTGTTCGTCCTTCTCAAAAAGATTACTTTTTTGCATTTCCAGGAAACTcccccccccccctggctattgtgcgctcatacactcaaattaaagatag                                                   <  2:1068017‑M1/100‑50 (MQ=255)
                                               gTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccccctggctattgtgcgctcacaaccccaaattaaaga                                                     >  2:882773‑M1/1‑51 (MQ=255)
                                                 tCTGTTTGTCCTTCTCAAACAGTTTTCTTTTCTGCATTTCCAGGATACTccccccccccctgtctattgtgcgctcatacactcaaattaaag                                                        <  2:2840472‑M1/93‑45 (MQ=255)
                                                 tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggtcgttgagcgctcatccactcaaattaaagataggt                                                 >  1:2449114‑M1/1‑49 (MQ=255)
                                                   tGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctcgttattgcccgctcatacactcaaattaaacataa                                                   >  2:3025401‑M1/1‑47 (MQ=255)
                                                    gCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctatttttccctcatacactcaaattaaagataggttcta                                              >  2:1220021‑M1/1‑46 (MQ=255)
                                                      tCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcataccctcaaattaaagaaaggttctaa                                            >  1:3059256‑M1/1‑44 (MQ=255)
                                                         tCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaata                                         <  1:1009401‑M1/100‑60 (MQ=255)
                                                          ccTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaat                                          <  1:187656‑M1/98‑59 (MQ=255)
                                                           cTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaa                                       <  1:1829562‑M1/100‑62 (MQ=255)
                                                           cTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccccggctattgtgcgcccatacccccaaattaaacataggttctaaataaa                                       >  1:454967‑M1/1‑39 (MQ=255)
                                                           cTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCCCCCC‑‑‑CCCCCTTGTTATTTTGCCCCCCTACCCCCCAATTAAACATAAGTTCtaaataa                                    >  2:3190010/1‑98 (MQ=255)
                                                             tctcAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctattgtgcgctcatacactcaaattaaagatcggttctaaataaa                                        <  2:2023012‑M1/97‑61 (MQ=255)
                                                              ctcAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctagctattgttcgctcatccactcaatttaaagataggttctaaacaaataa                                    >  1:1452433‑M1/1‑36 (MQ=255)
                                                              ctcAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCCCCTCCCCCTTGCTATTGTTCTCGCGTTCACCCCAATTAATGCAAGCTTCTtaataaat                                  >  2:2682676/1‑98 (MQ=255)
                                                                cAAAGAGTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagc                                   <  2:782977‑M1/99‑66 (MQ=255)
                                                                cAAAGAGTTTACTTTTCTGCATTTCCAGGATACTcccccccccccctggcgattttgcgctcatacactcaaattaaagataggttttaaataaacgagc                                  >  1:1288680‑M1/1‑34 (MQ=255)
                                                                cAAAGAGCTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctattgttctctcatacactcaaattaaagttaggttctaaataaat                                       >  1:1721781‑M1/1‑34 (MQ=255)
                                                                  aaGAGTTTACTTTTCTGCATTTCCAGGATAATcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcg                                 <  2:2208316‑M1/99‑68 (MQ=255)
                                                                     agTTTACTTTTCTGCATTTCCAGGATACTccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttt                             <  1:1000556‑M1/100‑72 (MQ=255)
                                                                      gTTTACTTTTCTGCATTTCCAGGATACTccccccccccccttgctatttttccctcataccctcaaattaaagataggttctaaaaaaatgagcgtttt                             >  2:3076555‑M1/1‑28 (MQ=255)
                                                                      gTTTACTTTTCTGCATTTCCAGGATACTCCCCCCC‑‑‑CCCCCTGGCTTTTTTTCCCTCAAACACCCCAATTAAAGATCGGTTCCAAATAAATTACCGttttt                        >  2:1109032/1‑100 (MQ=255)
                                                                           cTTTTCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgat                        <  1:3025437‑M1/99‑77 (MQ=255)
                                                                            ttttCTTCATTTCCAGGATTCTcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttga                         <  2:2355162‑M1/97‑76 (MQ=255)
                                                                            ttttCTGCATTTCCAGGATACTcccccccccccccggctattgtgcgctcatacactcacattaaagatcagttctaaataaatgagcgtttttttat                        >  1:1125649‑M1/1‑22 (MQ=255)
                                                                             tttCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagt                     <  1:1919775‑M1/100‑80 (MQ=255)
                                                                             tttCTGCATTTCCAGGATACTCCCCCCC‑‑‑CCCCCTGGTTATTTTTGTCTCCTCAACTCAAATTAAAAATTGGTTTTAAATAAATGATCGtttttt                       >  2:2765001/1‑94 (MQ=255)
                                                                             tttCTGCATTTCCAGGATACTCCCCCCC‑‑‑CCCCCTGGCTCTTTTTCGCTCATACACCCCAAGTAAAAAGTGGTTCTAAATAAATGAGCGTTTTTTCATAGt                 >  2:2287248/1‑100 (MQ=255)
                                                                              ttCTGCATTTCCAGGATACTcccccccccccctggctatttttcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgttagtt                    >  2:1235943‑M1/1‑20 (MQ=255)
                                                                              ttCTGCATTTCCAGGATACTcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtc                    <  1:1465061‑M1/100‑81 (MQ=255)
                                                                                  gCATTTCCCGGATAATcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatt                <  2:1426126‑M1/100‑85 (MQ=255)
                                                                                   cATTTCCAGGATACTccccccccccctggctattgtccgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttc               >  1:2299155‑M1/1‑15 (MQ=255)
                                                                                   cATTTCCAGGATACCcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctattt               <  1:2215147‑M1/100‑86 (MQ=255)
                                                                                    aTTTCCAGGATTCTccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatt                 <  2:3091045‑M1/97‑84 (MQ=255)
                                                                                    aTTTCCAGGATACTCCCCCC‑‑‑CCCCCTGCCTATTTTGCGCCCCTAACCTCAAAATAAAGATAGCTTCTAAATAACTACGCGTTTTTTGATAATCTATTTCa         >  1:2792289/1‑100 (MQ=255)
                                                                                    aTTTCCAGGATACTC‑‑CCCC‑‑‑CCCCCCGGGTAATTTGCCGCCCATCCACAAAAATTAAAAAAAGGTTCAAAAAAAATAAGGTTTTTTTGATatcttttttaa         >  1:2289516/1‑90 (MQ=255)
                                                                                      ttCCAGGATACTccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttca              <  2:384035‑M1/98‑87 (MQ=255)
                                                                                      ttCCAGGATACCcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcat            <  2:2073168‑M1/100‑89 (MQ=255)
                                                                                       tCCAGGATACTccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgttattctattt                >  2:2856778‑M1/1‑11 (MQ=255)
                                                                                       tCCAGGATACTccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcatta           <  2:2503273‑M1/100‑90 (MQ=255)
                                                                                       tCCAGGATACTcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcatt           <  2:84165‑M1/100‑90 (MQ=255)
                                                                                        ccAGGATACTcccccccccccctggctattgtgcgctcatacacccaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcatta          >  2:1673434‑M1/1‑10 (MQ=255)
                                                                                        ccAGGATACTcccccccccccctggctattgtgcgctcatacacccaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcatt           >  1:2004565‑M1/1‑10 (MQ=255)
                                                                                         cAGAATACTccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcattagg         <  2:2810208‑M1/100‑92 (MQ=255)
                                                                                          aGGATACTccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcattaggt        <  2:1115353‑M1/100‑93 (MQ=255)
                                                                                            gATACTccccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcattaggt      <  1:2914573‑M1/100‑95 (MQ=255)
                                                                                            gATACCcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcattag         <  1:1157912‑M1/97‑92 (MQ=255)
                                                                                               aCTcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcattaggtaata   <  1:2329946‑M1/100‑98 (MQ=255)
                                                                                                cTcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcattaggtaatat  >  1:3178149‑M1/1‑2 (MQ=255)
                                                                                                cTcccccccccccctggctattgtgcgctcatacactcaaattaaagataggttctaaataaatgagcgttttttgatagtctatttcattaggtaatat  >  1:487946‑M1/1‑2 (MQ=255)
                                                                                                 |                                                                                                  
AAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CCCC‑‑‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTA  >  NC_000913/2462783‑2462971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.