| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2151683 | NA (NA) | 6 (0.070) | 6/156 | NT | NA | noncoding (10/28 nt) | REP148 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP148 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 2151691 | NA (NA) | noncoding (18/28 nt) | REP148 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP148 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
TACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2151574‑2151683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggttgaaGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGGTG < NC_000913/2151691‑2151595 TACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACT < 2:2408626/100‑1TACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACT < 1:1661708/100‑1TACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACT > 1:2093984/1‑100 ACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTG < 1:974560/100‑1 CCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGG < 1:56062/100‑1 CCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGG > 1:2113984/1‑100 CCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTG > 1:1835375/1‑99 CCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATAAGCAGTTATATTTATTGTTTAAACTGG > 1:61576/1‑100 CATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC > 1:1124567/1‑100 CATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC > 1:2172108/1‑100 CATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC < 1:1673797/100‑1 ATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCG < 1:1874278/100‑1 ATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCG < 2:1946967/100‑1 TTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG < 2:354782/100‑1 TGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGT < 1:887546/100‑1 GATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGG > 1:291505/1‑98 ATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTG < 1:496499/100‑1 TCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGA < 2:2601498/100‑1 CCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAA < 2:394281/100‑1 CCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAA > 1:1370461/1‑100 CCTTTATCGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAA > 2:1387680/1‑100 TCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGC < 2:587641/100‑1 CCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCC < 1:1327788/100‑1 AAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCCAG < 1:1248371/100‑1 AAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAAC < 1:448927/99‑1 CGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAA < 1:2345920/100‑1 TTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGAAAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGA < 2:1196241/97‑1 TGGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTG < 1:65788/100‑1 TGGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTG < 2:374024/100‑1 TGGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTG < 1:397232/100‑1 TGGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTG < 2:1797909/100‑1 GGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAATTATATATTTAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGG < 1:1502240/100‑1 GGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGG > 1:2159813/1‑100 GCGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGA < 1:1579285/100‑1 CGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGAT > 1:1676133/1‑100 CGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGAT < 2:883408/100‑1 TTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGG < 2:1685853/100‑1 TTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGG < 2:1310810/100‑1 TTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGG < 2:45909/100‑1 TGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGGT > 2:355524/1‑100 GAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGGTG > 2:1069473/1‑100 GAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGGTG < 1:920076/100‑1 GAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGGTG < 2:436125/100‑1 TACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2151574‑2151683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggttgaaGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGGTG < NC_000913/2151691‑2151595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |