BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4460417 =	NA (NA)	8 (0.090)	7/168	NT	NA	noncoding (3/84 nt)	REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	4460445 =	NA (NA)	8 (0.090)	7/168	NT	NA	noncoding (31/84 nt)	REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 146 total aligned reads displayed.

CCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGT  >  NC_000913/4460318‑4460516

ccGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGcc                                                                                                     <  2:1831691/100‑1 (MQ=255)

ccGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGcc                                                                                                     <  1:504210/100‑1 (MQ=255)

ccGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGcc                                                                                                     <  2:1522751/100‑1 (MQ=255)

 gggaatgggcagataggttaatcttcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCt                                                                                                    >  2:379835‑M1/99‑100 (MQ=255)

  ggggCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTg                                                                                                   <  2:1256877/100‑1 (MQ=255)

  ggaatgggcagataggttaatcttcactctgagctaagtaaatgccggatgcggcgtaaaggctttattcggtctacatttggcaattgctccaggtCTg                                                                                                   <  1:2208307‑M1/3‑1 (MQ=255)

  ggaatgggcagataggttaatcttcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTg                                                                                                   >  1:2190736‑M1/98‑100 (MQ=255)

   gaatgggcagataggttaatcttcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGa                                                                                                  >  2:1761592‑M1/97‑100 (MQ=255)

    ggCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGAt                                                                                                 >  2:1804968/1‑100 (MQ=255)

    aatgggcagataggttaatcttcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGAt                                                                                                 >  1:68972‑M1/96‑100 (MQ=255)

          tGACGATGTCTACAGGATAGTACTTATGATAATTCATTATTTCGCCTGGCTTATCAGGCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACg                                                                                           <  1:1198017/100‑1 (MQ=255)

          tGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACg                                                                                           >  1:1320673/1‑100 (MQ=255)

           gACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTTGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGc                                                                                          <  1:280467/100‑1 (MQ=255)

           gACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGc                                                                                          <  1:682033/100‑1 (MQ=255)

           gACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGc                                                                                          >  2:1973337/1‑100 (MQ=255)

           gACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGc                                                                                          >  1:1187136/1‑100 (MQ=255)

                tGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTcg                                                                                     <  1:2020908/100‑1 (MQ=255)

                tGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTcg                                                                                     <  1:1081353/100‑1 (MQ=255)

                tGTCGACAGGATAGTACTGATGATAATTCATAATTTCGCCTGGCTTATCAGTACGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTc                                                                                      >  2:2297744/1‑99 (MQ=255)

                 gTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTcgc                                                                                    >  1:1806043/1‑100 (MQ=255)

                  tCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTcgcg                                                                                   >  2:2580942/1‑100 (MQ=255)

                   cGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGt                                                                                  >  2:1838615/1‑100 (MQ=255)

                   cGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGt                                                                                  <  2:664581/100‑1 (MQ=255)

                   cGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGt                                                                                  >  1:2222516/1‑100 (MQ=255)

                   cGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGt                                                                                  >  2:607704/1‑100 (MQ=255)

                    naCAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTc                                                                                 >  2:1971499/2‑100 (MQ=255)

                    gACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGtn                                                                                 <  1:924316/100‑2 (MQ=255)

                    gACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTc                                                                                 <  1:1887208/100‑1 (MQ=255)

                    gACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGAAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTc                                                                                 >  1:1323827/1‑100 (MQ=255)

                      cAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCt                                                                                <  2:1570431/99‑1 (MQ=255)

                       aGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTa                                                                              <  2:2443754/100‑1 (MQ=255)

                       aGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTa                                                                              <  2:2135321/100‑1 (MQ=255)

                       aGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTa                                                                              <  1:2621895/100‑1 (MQ=255)

                        ggATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTAt                                                                             >  2:1261485/1‑100 (MQ=255)

                          aTAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCa                                                                           <  1:606550/100‑1 (MQ=255)

                           tAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAg                                                                          <  1:1102862/100‑1 (MQ=255)

                             tctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGAc                                                                        >  1:243130‑M1/71‑100 (MQ=255)

                             tctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGAc                                                                        >  2:563961‑M1/71‑100 (MQ=255)

                              tACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGAcc                                                                       <  2:1652162/100‑1 (MQ=255)

                              tACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGAcc                                                                       >  2:701457/1‑100 (MQ=255)

                                cTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTAACAGACCTg                                                                     >  1:520120/1‑100 (MQ=255)

                                cTGATGATAATTCATTATTTCGCCAGGATTATCAGTCCGCGTGTATGCTGCATCCGGTAATCAATGCCTGATGCGACGCTCTCGCGTCTTATCAGAc                                                                        >  2:536504/1‑97 (MQ=37)

                                 tgatgaTAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTgg                                                                    >  2:806375/1‑100 (MQ=255)

                                  gatgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGa                                                                   <  2:808297/100‑1 (MQ=255)

                                   ctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAg                                                                  >  1:2513176‑M1/65‑100 (MQ=255)

                                    tgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGc                                                                 >  1:940638/1‑100 (MQ=255)

                                     gatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCa                                                                <  1:1429405/100‑1 (MQ=255)

                                     gatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCa                                                                <  1:2226474/100‑1 (MQ=255)

                                      atAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCaa                                                               >  1:2180343/1‑100 (MQ=255)

                                       tAATTTATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCa                                                                <  1:804699/98‑1 (MQ=255)

                                       tAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAAt                                                              >  1:1072712/1‑100 (MQ=255)

                                        aaTTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAAtt                                                             >  2:395480/1‑100 (MQ=255)

                                        aaTTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAAtt                                                             >  2:1456907/1‑100 (MQ=255)

                                         aTTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGTTAATCAATGCCTGATGCGACACTGTCTCGTCTAAAAAAACCTGGAGAAAtt                                                             >  1:743271/1‑99 (MQ=37)

                                          ttCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCCATTg                                                            >  2:1346158/1‑99 (MQ=255)

                                          ttCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGc                                                           <  1:1138181/100‑1 (MQ=255)

                                          ttCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGc                                                           >  1:722280/1‑100 (MQ=255)

                                           tCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGcc                                                          >  1:850124/1‑100 (MQ=255)

                                           tCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGcc                                                          <  2:285030/100‑1 (MQ=255)

                                            cATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCa                                                         <  1:1425600/100‑1 (MQ=255)

                                                attTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATg                                                     <  2:1806026/100‑1 (MQ=255)

                                                attTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATg                                                     <  1:2107880/100‑1 (MQ=255)

                                                   tCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAg                                                  >  2:2426172/1‑100 (MQ=255)

                                                    cGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAgg                                                 >  2:2259429/1‑100 (MQ=255)

                                                     gCCTGTCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAgg                                                 <  2:2201053/99‑1 (MQ=255)

                                                       cTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCg                                              >  1:1146852/1‑100 (MQ=255)

                                                         gtaaacgccttatccggcctacatttggcaattgctccaggcCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGa                                            >  1:1093872‑M1/43‑100 (MQ=255)

                                                             tATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCT‑GAGCAATTGCCAAATGTAGGCCGGATAAgg                                       >  2:2640373/1‑100 (MQ=255)

                                                             tATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGAACTGGAGCAATTGCCAAATGTAGGCCGGATAAg                                        >  2:2137035/1‑100 (MQ=255)

                                                                cAGTCCGCGTGTAGTCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCg                                     <  2:212087/100‑1 (MQ=255)

                                                                    ccGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTa                                 <  1:1334988/100‑1 (MQ=255)

                                                                    ccGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTa                                 <  1:2051515/100‑1 (MQ=255)

                                                                     cgcgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAc                                >  2:1004457/1‑100 (MQ=255)

                                                                       cgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgc                              <  1:1688735/100‑1 (MQ=255)

                                                                        gtgtAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgcc                             <  1:1061033/100‑1 (MQ=255)

                                                                         tgtAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgccg                            <  2:618628/100‑1 (MQ=255)

                                                                         tgtAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgcc                             <  1:1380668/99‑1 (MQ=255)

                                                                          gtAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgccgc                           >  1:2207466/1‑100 (MQ=255)

                                                                            aGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCAt                         >  2:530998/1‑100 (MQ=255)

                                                                            aGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCAt                         >  2:1534928/1‑100 (MQ=255)

                                                                             ggCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATc                        >  2:384545/1‑100 (MQ=255)

                                                                              gCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATcc                       <  2:440720/100‑1 (MQ=25)

                                                                                   aTCCGTTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAt                  <  2:2486732/100‑1 (MQ=255)

                                                                                   aTCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACTCCGCATCCGGCAt                  >  2:112171/1‑100 (MQ=255)

                                                                                     ccGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGAAGGATAAGGCGTTTACGCCGAATCCGGCAttt                >  1:1523993/1‑100 (MQ=255)

                                                                                     ccGGTAATCAATGCCTGATGCGACGCAGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAttt                >  1:1613867/1‑100 (MQ=255)

                                                                                       ggTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGc              >  2:1667599/1‑100 (MQ=255)

                                                                                       ggTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGc              <  2:1613851/100‑1 (MQ=255)

                                                                                       ggTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTACCAAATGTAGACCGGATGCGGCGTAAACGCCTTATCCGGCagatcg              >  1:298460/1‑95 (MQ=21)

                                                                                         tAATCAATGTCTGATGCGACGCTGGCGCGTCTTATCAGTCCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCtt            <  1:248452/100‑1 (MQ=255)

                                                                                            tCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAgn         <  1:1971517/100‑2 (MQ=255)

                                                                                            tCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGc         <  1:806383/100‑1 (MQ=255)

                                                                                              aaTGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTc       <  1:1572890/100‑1 (MQ=255)

                                                                                              aaTGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTc       <  1:923581/100‑1 (MQ=255)

                                                                                                tGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCag     >  1:2438095/1‑100 (MQ=255)

                                                                                                 gCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCaga    >  2:1062007/1‑100 (MQ=255)

                                                                                                  ccTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCagag   <  1:180121/100‑1 (MQ=255)

                                                                                                   CTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGt  <  2:2338772‑M1/100‑1 (MQ=255)

                                                                                                   CTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGt  >  1:564853‑M1/1‑100 (MQ=255)

                                                                                                   CTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGt  <  1:1296223‑M1/100‑1 (MQ=255)

CCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGT  >  NC_000913/4460318‑4460516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.