New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4460417 =NA (NA)8 (0.090) 7/168 NT NA noncoding (3/84 nt) REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4460445 = NA (NA)noncoding (31/84 nt) REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 142 total aligned reads displayed.

GTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTCCCCA  >  NC_000913/4460347‑4460544
                                                                                                  |                                                                                                   
tctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGAc                                                                                                    >  2:563961‑M1/71‑100 (MQ=255)
tctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGAc                                                                                                    >  1:243130‑M1/71‑100 (MQ=255)
 tACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGAcc                                                                                                   >  2:701457/1‑100 (MQ=255)
 tACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGAcc                                                                                                   <  2:1652162/100‑1 (MQ=255)
 tACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCATATAAACTACATCCAATAATCAATCCCTGATGCGACGCTGTCGCGTCTTATCAGAcc                                                                                                   <  1:2208992/100‑1 (MQ=25)
  tgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCt                                                                                                  >  1:2453934‑M1/69‑100 (MQ=255)
   cTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTAACAGACCTg                                                                                                 >  1:520120/1‑100 (MQ=255)
   cTGATGATAATTCATTATTTCGCCAGGATTATCAGTCCGCGTGTATGCTGCATCCGGTAATCAATGCCTGATGCGACGCTCTCGCGTCTTATCAGAc                                                                                                    >  2:536504/1‑97 (MQ=37)
     gatgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGa                                                                                               <  2:808297/100‑1 (MQ=255)
     gatgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGa                                                                                               >  2:2158586/1‑100 (MQ=255)
      ctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAg                                                                                              >  1:2513176‑M1/65‑100 (MQ=255)
      atgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAg                                                                                              <  1:1323394/100‑1 (MQ=255)
       tgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGc                                                                                             >  1:940638/1‑100 (MQ=255)
       tgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGc                                                                                             >  1:767031/1‑100 (MQ=255)
       taagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggcCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGc                                                                                             >  2:830980‑M1/64‑100 (MQ=255)
         atAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCaa                                                                                           >  1:2180343/1‑100 (MQ=255)
          tAATTTATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCa                                                                                            <  1:804699/98‑1 (MQ=255)
          tAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAAt                                                                                          >  1:1072712/1‑100 (MQ=255)
           aaTTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAAtt                                                                                         >  2:1456907/1‑100 (MQ=255)
            aTTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGTTAATCAATGCCTGATGCGACACTGTCTCGTCTAAAAAAACCTGGAGAAAtt                                                                                         >  1:743271/1‑99 (MQ=37)
            aTTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTg                                                                                        >  1:1591403/1‑100 (MQ=255)
             ttCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCCATTg                                                                                        >  2:1346158/1‑99 (MQ=255)
              tCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGcc                                                                                      <  2:285030/100‑1 (MQ=255)
              tCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGcc                                                                                      <  1:1125713/100‑1 (MQ=255)
               cATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCa                                                                                     <  1:1425600/100‑1 (MQ=255)
               cATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCa                                                                                     <  2:1794665/100‑1 (MQ=255)
                attattTCGCCTGGCTTATCAGTCCGCTTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCa                                                                                     <  2:1664733/99‑1 (MQ=255)
                  tattTCGCCTGGCTTATCAGTCCGCGTTTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAAt                                                                                  <  2:395916/100‑1 (MQ=255)
                  tattTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAAt                                                                                  <  1:2158612/100‑1 (MQ=255)
                  tattTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAAt                                                                                  <  1:1456921/100‑1 (MQ=255)
                   attTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAAt                                                                                  >  2:147019/1‑99 (MQ=255)
                   attTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATg                                                                                 <  2:1806026/100‑1 (MQ=255)
                    tttCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGt                                                                                >  1:1876891/1‑100 (MQ=255)
                        gCCTGTCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAgg                                                                             <  2:2201053/99‑1 (MQ=255)
                          cTGGCTTATCAGTCCGCGTGTAGGCTGCATCCTGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCg                                                                          <  1:2244425/100‑1 (MQ=255)
                          cTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCg                                                                          >  1:1146852/1‑100 (MQ=255)
                           tGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGACAAATGTAGGCCgg                                                                         >  2:2382598/1‑100 (MQ=255)
                                tATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGAGCAATTGCCAAATGTAGGCCGGATAAgg                                                                   >  2:2640373/1‑100 (MQ=255)
                                   cAGTCCGCGTGTAGTCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCg                                                                 <  2:212087/100‑1 (MQ=255)
                                    aGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGt                                                                >  2:573917/1‑100 (MQ=255)
                                       ccGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTa                                                             <  1:2051515/100‑1 (MQ=255)
                                        tccggcctacatttggcaattgctccaggtctgataagacgcgacagcgtcgcatcagGCCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAc                                                            >  1:1093872‑M2/59‑100 (MQ=255)
                                        cgcgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAc                                                            >  2:1004457/1‑100 (MQ=255)
                                          cgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgc                                                          <  1:1688735/100‑1 (MQ=255)
                                           gtgtAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgcc                                                         <  1:1061033/100‑1 (MQ=255)
                                            tgtAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgccg                                                        <  2:618628/100‑1 (MQ=255)
                                            tgtAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgcc                                                         <  1:1380668/99‑1 (MQ=255)
                                               aGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCAt                                                     >  2:530998/1‑100 (MQ=255)
                                                ggCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                    >  2:384545/1‑100 (MQ=255)
                                                 gCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATcc                                                   <  2:440720/100‑1 (MQ=25)
                                                      aTCCGTTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAt                                              <  2:2486732/100‑1 (MQ=255)
                                                      aTCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACTCCGCATCCGGCAt                                              >  2:112171/1‑100 (MQ=255)
                                                          ggTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGc                                          <  2:1613851/100‑1 (MQ=255)
                                                          ggTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGc                                          <  1:531002/100‑1 (MQ=255)
                                                          ggTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGc                                          >  1:1090025/1‑100 (MQ=255)
                                                          ggTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGc                                          >  2:1667599/1‑100 (MQ=255)
                                                          attgctccaggtctgataagacgcgacagcgtcgcatcagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGc                                          >  1:637510‑M2/41‑100 (MQ=255)
                                                            tAATCAATGTCTGATGCGACGCTGGCGCGTCTTATCAGTCCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCtt                                        <  1:248452/100‑1 (MQ=255)
                                                             aaTCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTa                                       <  1:1167828/100‑1 (MQ=255)
                                                              ctccaggtctgataagacgcgacagcgtcgcatcagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAg                                      >  1:2513176‑M2/37‑100 (MQ=255)
                                                               tCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGc                                     <  1:806383/100‑1 (MQ=255)
                                                                 aaTGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTc                                   <  1:923581/100‑1 (MQ=255)
                                                                 aaTGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTc                                   <  1:1572890/100‑1 (MQ=255)
                                                                  aggtctgataagacgcgacagcgtcgcatcagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCa                                  >  1:2453934‑M2/33‑100 (MQ=255)
                                                                   ggtctgataagacgcgacagcgtcgcatcagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCag                                 >  1:2591919‑M2/32‑100 (MQ=255)
                                                                    gtctgataagacgcgacagcgtcgcatcagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCaga                                >  1:243130‑M2/31‑100 (MQ=255)
                                                                    gCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCaga                                >  2:1062007/1‑100 (MQ=255)
                                                                     ccTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCagag                               <  1:180121/100‑1 (MQ=255)
                                                                      CTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGt                              >  1:564853‑M1/1‑100 (MQ=255)
                                                                      CTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGt                              <  2:2338772‑M1/100‑1 (MQ=255)
                                                                      CTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGt                              <  1:1296223‑M1/100‑1 (MQ=255)
                                                                       TGATGCGACGTTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTg                             >  2:1739750‑M1/1‑100 (MQ=255)
                                                                       TGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTg                             >  1:2232084‑M1/1‑100 (MQ=255)
                                                                          TGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAg                          >  1:384547‑M1/1‑100 (MQ=255)
                                                                          TGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAg                          >  1:1641381‑M1/1‑100 (MQ=255)
                                                                           gCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAgn                         <  2:1946062/100‑2 (MQ=255)
                                                                           gCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGa                         >  1:145631/1‑100 (MQ=255)
                                                                            cGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGAt                        >  1:114138/1‑100 (MQ=255)
                                                                            cGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGAt                        <  1:2602399/100‑1 (MQ=255)
                                                                              aCGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTa                      <  1:1436999/100‑1 (MQ=255)
                                                                                tcTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAAc                    <  2:778186/99‑1 (MQ=255)
                                                                                tcTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAAc                    <  2:871454/99‑1 (MQ=255)
                                                                                 cTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAAcc                   <  1:2417730/100‑1 (MQ=255)
                                                                                   gTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAAcaga                 >  1:871463/1‑97 (MQ=255)
                                                                                   gTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTa                 >  2:2581577/1‑100 (MQ=255)
                                                                                    tCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTAt                <  2:691133/100‑1 (MQ=255)
                                                                                     cgcgTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATc               >  1:9421/1‑100 (MQ=255)
                                                                                      gcgTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCt              <  1:1973355/100‑1 (MQ=255)
                                                                                         tCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGcc           <  2:930238/100‑1 (MQ=255)
                                                                                         tCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGcc           >  2:12392/1‑100 (MQ=255)
                                                                                         tCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGcc           <  1:393072/100‑1 (MQ=255)
                                                                                         tCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGcc           <  2:2222489/100‑1 (MQ=255)
                                                                                           ttATCAGACCTGGAGCAATTGCTAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCa         <  1:1820377/100‑1 (MQ=255)
                                                                                           ttATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTAAAGATTAACCTATCTGCCCa         <  2:1214641/100‑1 (MQ=255)
                                                                                             atcagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCAtt       >  1:68972‑M2/6‑100 (MQ=255)
                                                                                               cagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTcc     >  1:2190736‑M2/4‑100 (MQ=255)
                                                                                               cagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTcc     <  2:2634631‑M2/97‑1 (MQ=255)
                                                                                               cagACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTcc     >  1:839877‑M2/4‑100 (MQ=255)
                                                                                               cagACCTGGAGCAATTGCCAAATGTAGACCGAATAAAGCCTTTACGCCGCATCCGGCATTTACTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTcc     <  1:2208307‑M2/97‑1 (MQ=255)
                                                                                                agACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTccc    >  2:379835‑M2/3‑100 (MQ=255)
                                                                                                  |                                                                                                   
GTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGTGAAGATTAACCTATCTGCCCATTCCCCA  >  NC_000913/4460347‑4460544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.