| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 224957 = | NA (NA) | 7 (0.080) | 9/166 | NT | NA | noncoding (1187/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 224974 = | NA (NA) | noncoding (1204/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
GGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCA > NC_000913/224858‑224989 | ggTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAGAGGAGACTGCCAGTGATAAACTGGAGGAAGGTgggg > 1:1862569/1‑100 (MQ=18)ggTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTgggg < 2:488162/100‑1 (MQ=33) gTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGa < 1:439400/100‑1 (MQ=33) gTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGa < 1:439377/100‑1 (MQ=33) gTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAAGTGGGGa > 1:495831/1‑100 (MQ=18) tAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATg < 2:1011878/100‑1 (MQ=32) tAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATg < 1:2523863/100‑1 (MQ=33) aaGTCCTGCAACGAGAGCAATCCTTATCTGTTGTTTCCAGCGGTCCGCCTGGGAACTCAAAAGAGAATGCCAGTGATAAACTGGAGGAAGGAGGGGATg > 2:344988/1‑99 (MQ=11) aaGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAAGAAACTACAAGAGATAAAATGGAGGAAGGTGGGGATGa > 1:159176/1‑100 (MQ=11) aGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGCGACTGCCAGTGATAAACTGGCGGAAGGTGGGGATGAc > 2:2533718/1‑100 (MQ=12) aGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGCCTGCCAGTGATAAACTGGAGGAAGGTGGGGATGAc > 2:2437316/1‑100 (MQ=17) gTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACg < 2:2005022/100‑1 (MQ=32) gTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACg > 1:162188/1‑100 (MQ=33) gTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACg < 1:1090874/100‑1 (MQ=33) cccGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTc > 2:966711/1‑100 (MQ=33) cGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAAACTGCAAGTGATAAACTGGAGGAAGGTGGGGATGACGTCaa > 1:2048735/1‑100 (MQ=16) gCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAg < 2:980234/100‑1 (MQ=33) gCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAg < 2:1384707/100‑1 (MQ=33) gCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAg < 1:1383754/100‑1 (MQ=33) cAACGATCGCAACCTTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTAAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGACaa > 2:1168171/1‑98 (MQ=11) aaCGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGAAAAACTAGAGAAAGGTGGGGATGACGTCAAGt > 1:103757/1‑99 (MQ=255) aCGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGtca < 2:2126414/100‑1 (MQ=33) cGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGtcat > 2:714582/1‑100 (MQ=33) aGCGCAACCCTTATGTTTTGTTGCCAGCGGGCCGGCCGGGAACTCAACGGGGACTTCCAGTGGTAAACTGGACGAAGGTGGGAATGGCGTCAAGtcatc > 2:660965/1‑99 (MQ=11) aGCGCAACCCTTATCTTTTGTTGTCAGCGGTCTGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGtcatca < 1:461916/100‑1 (MQ=16) aGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGAAAAAAACTGAAAGAAGGAGGGGATGACGTCAAGtcatca > 1:523851/1‑100 (MQ=11) gcgcAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTcatcat > 1:312325/1‑100 (MQ=33) gcAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATgg > 1:31728/1‑100 (MQ=33) gcAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATgg > 2:477571/1‑100 (MQ=32) aaCCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGcc < 2:1008763/100‑1 (MQ=33) ccTTATCTTTTGTTGCCAGCGGTCCGGTCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAATGTGGGGATGACGTCAAGTCATTATGGCCCtt > 2:1143138/1‑100 (MQ=255) cTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGTCAGTGATATACTGGAGGTAGGAGGGGATGACGTCAAGTCATCATGGCCCTTa > 2:628582/1‑100 (MQ=11) tATCTTTTGTTGCCAGCGGTCCGGCCGGGAATTCAAAGGTGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACg < 1:2012596/100‑1 (MQ=12) tATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACg < 1:90751/100‑1 (MQ=33) tCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAc < 1:1823190/100‑1 (MQ=32) cTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAcc > 1:2310164/1‑100 (MQ=31) ttttGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCa > 2:830657/1‑100 (MQ=11) | GGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCA > NC_000913/224858‑224989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |