New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2097239 =NA (NA)7 (0.080) 5/162 NT NA noncoding (3/30 nt) REP143 (repetitive extragenic palindromic) element; contains 1 REP sequences REP143 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2097265 = NA (NA)noncoding (29/30 nt) REP143 (repetitive extragenic palindromic) element; contains 1 REP sequences REP143 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 122 total aligned reads displayed.

GATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAAT  >  NC_000913/2097141‑2097337
                                                                                                  |                                                                                                  
gtgctggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcc                                                                                                    <  2:1160355‑M1/1‑1 (MQ=255)
gtgctggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcc                                                                                                    <  1:1114809‑M1/1‑1 (MQ=255)
gtgctggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCg                                                                                                   <  1:1541332‑M1/2‑1 (MQ=255)
gtgctggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaaaggcagggtggtgacaccttgcccgtttttttgcCg                                                                                                   <  1:1495033‑M1/2‑1 (MQ=255)
gATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCg                                                                                                   <  2:2513343/100‑1 (MQ=255)
 tgctcgggcgtaatgctcttcgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCgg                                                                                                  >  2:1794694‑M1/98‑100 (MQ=255)
  tgctggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgttttttgcCGGa                                                                                                 <  2:2467025‑M1/4‑1 (MQ=255)
   ctggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGAt                                                                                                <  1:469899‑M1/5‑1 (MQ=255)
   ctggggcgtaaagctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGAt                                                                                                <  2:1387213‑M1/5‑1 (MQ=255)
    tATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATg                                                                                               >  1:517544/1‑100 (MQ=255)
     ggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGc                                                                                              <  2:911633‑M1/7‑1 (MQ=255)
     ggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGc                                                                                              <  1:1103291‑M1/7‑1 (MQ=255)
     ggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGc                                                                                              <  2:1680587‑M1/7‑1 (MQ=255)
     aTCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGc                                                                                              <  1:530526/100‑1 (MQ=255)
     aTCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGc                                                                                              <  2:517540/100‑1 (MQ=255)
     aTCACCTGCTGGTGTCGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGc                                                                                              <  1:2611033/100‑1 (MQ=255)
      tCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCg                                                                                             >  1:565842/1‑100 (MQ=255)
      gggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCg                                                                                             >  1:2428183‑M1/93‑100 (MQ=255)
      gggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCg                                                                                             <  2:1566289‑M1/8‑1 (MQ=255)
       ggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggaggtgacaccttgccagtttttttgccggaagag                                                                                             <  2:2501745‑M1/8‑5 (MQ=255)
        aCCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGat                                                                                           <  1:2412823/100‑1 (MQ=255)
        aCCTGCTGGTGTTGTTGCAGGACCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGat                                                                                           >  2:1541317/1‑100 (MQ=255)
              tgGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATAttgt                                                                                      <  2:1371587/99‑1 (MQ=255)
               ggTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATAttgttg                                                                                    >  1:2003826/1‑100 (MQ=255)
                ctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCGATATTGTTGc                                                                                   >  1:998121‑M1/83‑100 (MQ=255)
                    tgttgCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGATGCGGGGTAAGCGGATGCGATATTGTTGCCGCa                                                                               >  1:2044861/1‑100 (MQ=255)
                     gttgCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCAt                                                                              >  2:1309963/1‑100 (MQ=255)
                     gttgCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCAt                                                                              >  1:2202488/1‑100 (MQ=255)
                     gttgCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCAt                                                                              >  2:2046776/1‑100 (MQ=255)
                       tgCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATcc                                                                            >  2:1150193/1‑100 (MQ=255)
                       tgCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACAGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATcc                                                                            >  2:786536/1‑100 (MQ=255)
                        gCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCg                                                                           >  1:1503651/1‑100 (MQ=255)
                         cAGGATCGGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCgg                                                                          >  1:1387227/1‑100 (MQ=255)
                         cAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCgg                                                                          <  2:1652299/100‑1 (MQ=255)
                         cAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCgg                                                                          <  1:39623/100‑1 (MQ=255)
                         attacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgataccttgcccgtttttttgcCGGATGCGATATTGTTGCCGCATCCgg                                                                          >  1:702050‑M1/74‑100 (MQ=255)
                         attacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCGATATTGTTGCCGCATCCgg                                                                          >  2:1900694‑M1/74‑100 (MQ=255)
                          ttacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCGATATTGTTGCCGCATCCGGc                                                                         >  1:1334220‑M1/73‑100 (MQ=255)
                          ttacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCGATATTGTTGCCGCATCCGGc                                                                         >  1:828354‑M1/73‑100 (MQ=255)
                          aGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGACATCAATGAGTTGAGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGc                                                                         >  1:2047662/1‑100 (MQ=255)
                           ggATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCa                                                                        >  2:2360830/1‑100 (MQ=255)
                           ggATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGAAAGCGGATGCGATATTGTTGCCGCATCCGGCa                                                                        >  1:2484208/1‑100 (MQ=255)
                           ggATCAGGGGCTGGATTTAACGACGGTAATTGAAAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCa                                                                        >  2:1753007/1‑100 (MQ=255)
                             aTCAGGGGCTTGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaa                                                                      <  2:2239729/100‑1 (MQ=255)
                             aTCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaa                                                                      >  1:1413897/1‑100 (MQ=255)
                             aTCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaa                                                                      >  2:1679980/1‑100 (MQ=255)
                             aTCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGAGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaa                                                                      >  1:2238133/1‑100 (MQ=255)
                              tCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTACGAAGAAAGCGGATGCGATATTGTTGCCGCATCCGGCaaaa                                                                     >  1:2314672/1‑100 (MQ=255)
                              aacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCGATATTGTTGCCGCATCCGGCaaaa                                                                     >  2:394555‑M1/69‑100 (MQ=255)
                               cAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaaaa                                                                    >  1:1634158/1‑100 (MQ=255)
                               cAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaaaa                                                                    >  2:1258799/1‑100 (MQ=255)
                                aGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGGATGCGGcaacaat                                                                   <  1:1904084/100‑2 (MQ=255)
                                aGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaaaaa                                                                   >  2:1521595/1‑100 (MQ=255)
                                  gggCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAAc                                                                 >  1:205738/1‑100 (MQ=255)
                                   ggCTGGATTTGACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGGATGCGGCaacaatatc                                                                <  1:2411889/100‑8 (MQ=255)
                                   ggCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACg                                                                <  1:2306783/100‑1 (MQ=255)
                                          tttAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGTGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAgg                                                         >  2:441440/1‑100 (MQ=255)
                                          tttAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAgg                                                         <  1:1928062/100‑1 (MQ=255)
                                          tttAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGAAAAAAAACGGGCAAgg                                                         <  2:980531/100‑1 (MQ=255)
                                           ttAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGgt                                                        <  1:336343/100‑1 (MQ=255)
                                           ttAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGAATGCGATATAGTTGCAGCATCCGGCAAAAAAACGAGCAAg                                                          >  1:2380634/1‑98 (MQ=255)
                                            tAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGgtg                                                       >  2:318358/1‑100 (MQ=255)
                                            tAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGgtg                                                       >  2:1401019/1‑100 (MQ=255)
                                            tAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGgtg                                                       >  2:2531166/1‑100 (MQ=255)
                                            tAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGgtg                                                       <  1:1855798/100‑1 (MQ=255)
                                            tAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGgtg                                                       >  1:938148/1‑100 (MQ=255)
                                              acgacgGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGgtgt                                                      >  1:911642/1‑99 (MQ=255)
                                                gacgGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGTGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTca                                                    >  1:1211466/1‑99 (MQ=255)
                                                 acgGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTcacc                                                  >  1:1693979/1‑100 (MQ=255)
                                                   ggTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTcaccac                                                >  2:469895/1‑100 (MQ=255)
                                                   ggTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCAGGCAAAAAAACGGGCAAGGTGTcaccac                                                <  1:477741/100‑1 (MQ=255)
                                                       aTTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTg                                            >  1:1680603/1‑100 (MQ=255)
                                                        ttGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGc                                           <  1:2655863/100‑1 (MQ=255)
                                                        ttGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGCAAGCGGAAGCGATATTGATGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACACTg                                            >  2:1217243/1‑99 (MQ=255)
                                                         tGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGcc                                          >  1:1566305/1‑100 (MQ=255)
                                                               ccTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCttttt                                    >  2:2050558/1‑100 (MQ=255)
                                                                cTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAGGGTGGTGACACCTTGCCCgtttt                                    <  1:2372294/99‑1 (MQ=37)
                                                                cTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTc                                   <  1:1666153/100‑1 (MQ=255)
                                                                 tGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCt                                  <  1:1654030/100‑1 (MQ=255)
                                                                  gCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCtt                                 <  1:2529327/100‑1 (MQ=255)
                                                                  gCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCtt                                 <  1:2000272/100‑1 (MQ=255)
                                                                    gTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTa                               <  2:66800/100‑1 (MQ=255)
                                                                     tAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTaa                              <  2:2500239/100‑1 (MQ=255)
                                                                     tAAAAGGTATCAGTGCGTTGTGGGGTAAGCGGATGCGATATTGTTGACGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCttt                                <  2:2305029/98‑1 (MQ=255)
                                                                      aaaCGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATACGGCAAAAAACCGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTaaa                             <  1:1853864/100‑1 (MQ=255)
                                                                        aCGGCATCAGTGAGTTGCGGGGTAAGCGTATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAAc                           <  1:564679/100‑1 (MQ=255)
                                                                        aCGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCTCTTTTTCTTTAAAAc                           <  2:1268433/100‑1 (MQ=255)
                                                                        aCGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAAc                           <  1:1106184/100‑1 (MQ=255)
                                                                         cGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAAcc                          >  2:230123/1‑100 (MQ=255)
                                                                                  tGATTTGCGGGGTAAGCGGATGCGATATTGTTTCCGTATCCGAGAAAAAAACGGGCAATGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGAtt                 <  2:585401/100‑1 (MQ=255)
                                                                                        gCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTcg           >  1:4202/1‑100 (MQ=255)
                                                                                          ggggTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGGCACCACCCTGCCCTTTTTCTTTAAAACTGAAAAGATTACTTcgcg         <  2:981084/100‑1 (MQ=255)
                                                                                           gggTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGt        <  2:1521284/100‑1 (MQ=255)
                                                                                           gggTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGt        >  1:1379865/1‑100 (MQ=255)
                                                                                             gTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTg      <  1:1309976/100‑1 (MQ=255)
                                                                                             gTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTg      <  2:6064/100‑1 (MQ=255)
                                                                                             gTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTg      >  2:1895030/1‑100 (MQ=255)
                                                                                              tAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGt     >  1:1001645/1‑100 (MQ=255)
                                                                                               aaGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGTTCAAAGTGTCTCCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTa    <  2:964377/100‑1 (MQ=255)
                                                                                                 gCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAAt  <  2:205736/100‑1 (MQ=255)
                                                                                                  |                                                                                                  
GATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAAT  >  NC_000913/2097141‑2097337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.