New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4587878NA (NA)4 (0.050) 3/162 NT NA noncoding (7/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4587891 NA (NA)noncoding (20/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 121 total aligned reads displayed.

ATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGG  >  NC_000913/4587792‑4587989
                                                                                                   |                                                                                                  
aTCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCtt                                                                                                    >  1:655234/1‑100 (MQ=255)
aTCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCtt                                                                                                    >  2:1840932/1‑100 (MQ=255)
    gtgtttatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATcc                                                                                                >  1:1484726‑M1/76‑100 (MQ=255)
    aaaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatcc                                                                                                >  2:258870‑M2/1‑96 (MQ=255)
       aCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggc                                                                                             >  1:1486021‑M2/1‑93 (MQ=255)
        ttatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGcc                                                                                            >  2:198151‑M1/72‑100 (MQ=255)
        ttatcgggatccagctgccggaggaagagattcaggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGcc                                                                                            >  2:658268‑M1/72‑100 (MQ=255)
        cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcc                                                                                            >  2:1018673‑M2/1‑92 (MQ=255)
        cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcc                                                                                            >  1:1090113‑M2/1‑92 (MQ=255)
         gAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGccc                                                                                           >  2:1066138/1‑100 (MQ=255)
         gAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGccc                                                                                           >  2:1686004/1‑100 (MQ=255)
          aaGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCa                                                                                          <  1:1194804/100‑1 (MQ=255)
           aGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCa                                                                                          <  1:2049230/99‑1 (MQ=255)
            gTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGATACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTCTCCTGCCCATa                                                                                        <  2:1392407/100‑1 (MQ=255)
               ggggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcc                                                                                     >  1:1024114/1‑100 (MQ=255)
               ggggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcc                                                                                     <  2:2554961/100‑1 (MQ=255)
                 ggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcccc                                                                                   >  2:2345342/1‑100 (MQ=255)
                 ggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcccc                                                                                   <  2:1195416/100‑1 (MQ=255)
                   tttCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcccn                                                                                   <  1:710485/98‑2 (MQ=255)
                   tttATTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGTTGCGCCTTATCCTGCCCATAACCCCtt                                                                                 <  2:3893/100‑1 (MQ=255)
                      cttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACt                                                                              >  2:76397/1‑100 (MQ=255)
                      cttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACt                                                                              <  2:573908/100‑1 (MQ=255)
                       ttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACtt                                                                             >  2:60298/1‑100 (MQ=255)
                        tcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTc                                                                            >  2:316022/1‑100 (MQ=255)
                         cACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                                           >  2:535366/1‑100 (MQ=255)
                           cGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTc                                                                         <  1:2211020/100‑1 (MQ=255)
                            gTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCa                                                                        <  2:2575317/100‑1 (MQ=255)
                            gTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCa                                                                        <  2:1870440/100‑1 (MQ=255)
                            gTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCa                                                                        <  1:1319979/100‑1 (MQ=255)
                            gTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCAGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCa                                                                        >  1:377447/1‑100 (MQ=255)
                              ttgttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAc                                                                      <  1:1334899/100‑1 (MQ=255)
                               tgttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGACCCATAACCACTTACTTCCTAAAc                                                                      >  1:1146668/1‑99 (MQ=255)
                                gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                    >  2:2617969/1‑100 (MQ=255)
                                gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAcc                                                                     >  2:871900/1‑99 (MQ=255)
                                gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGAGACTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                    >  1:1582781/1‑100 (MQ=255)
                                  tgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCg                                                                  >  1:37762/1‑100 (MQ=255)
                                   gAAGGTGCCGAAACTGGATATGTACTATTTTGTGTGAAATATCAGGCCGGATGCGGTTGCTCCTTATCCTGTCCATAATCCCTTACTTCCTCAACCCCGc                                                                 <  2:177135/100‑1 (MQ=255)
                                   gAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGc                                                                 <  1:655779/100‑1 (MQ=255)
                                   gAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGc                                                                 >  2:607439/1‑100 (MQ=255)
                                   gAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGc                                                                 >  1:976111/1‑100 (MQ=255)
                                   gAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGc                                                                 >  1:850280/1‑100 (MQ=255)
                                   gAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGACCATAACCCCTTACTTCCTCAACCCCGc                                                                 >  2:1575808/1‑100 (MQ=255)
                                     aGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCaa                                                               <  2:1973411/100‑1 (MQ=255)
                                        tGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACg                                                            >  2:415291/1‑100 (MQ=255)
                                         gCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                                           >  2:1554571/1‑100 (MQ=255)
                                          ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCa                                                          >  1:1896534/1‑100 (MQ=255)
                                           cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAg                                                         >  2:1025927/1‑100 (MQ=255)
                                           cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAg                                                         >  2:122355/1‑100 (MQ=255)
                                            gAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGc                                                        <  1:666849/100‑1 (MQ=255)
                                             aaaCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGcc                                                       <  2:1938664/100‑1 (MQ=255)
                                             aaaCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGcc                                                       <  2:1570205/100‑1 (MQ=255)
                                              aaCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGccc                                                      >  1:104985/1‑100 (MQ=255)
                                                 tGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGaa                                                   <  1:1755308/100‑1 (MQ=255)
                                                 tGGATATGGACTATTTTGAGTGAAATATCAGGCCGGAGGCGGCTGCGCCTTATCCTGCCCATAACCCCATAATTAATAAACCCCTCAAACAAAGCCCGaa                                                   >  1:447953/1‑100 (MQ=255)
                                                   gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                                 <  1:60298/100‑1 (MQ=255)
                                                     tatGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCAAAtctc                                               >  1:789618/1‑100 (MQ=255)
                                                       tGGACTCTTTTGAGTGAAATATGAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCACTTACTAGCTCAACCCTGCACACACAGCCCGAAtttc                                               >  2:178649/1‑98 (MQ=255)
                                                       tGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCtt                                             >  1:70998/1‑100 (MQ=255)
                                                        ggACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtc                                            >  2:719154/1‑100 (MQ=255)
                                                        ggACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtc                                            >  2:694472/1‑100 (MQ=255)
                                                         gACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCtcctcc                                           <  1:316024/100‑1 (MQ=255)
                                                         gACTATTTTGAGTAAAATATCAGGCCGGATGGGGCTGCGCCTTATCCGGCCCATAACCCCTTACATCATCAACCCCGCACACACAGCACGAATCTATtc                                            >  1:1782998/1‑99 (MQ=255)
                                                          aCTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcct                                          >  2:1235943/1‑100 (MQ=255)
                                                          aCTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcct                                          >  1:635331/1‑100 (MQ=255)
                                                             aTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCg                                       >  2:54455/1‑100 (MQ=255)
                                                             aTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCACGAATCTCTTCCTCCg                                       >  2:534914/1‑100 (MQ=255)
                                                               tttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGc                                     <  2:1699424/100‑1 (MQ=255)
                                                               tttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCACAAATCTCTTCCTCCGGc                                     >  2:248687/1‑100 (MQ=255)
                                                                ttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCa                                    <  1:719159/100‑1 (MQ=255)
                                                                ttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCa                                    >  1:2379025/1‑100 (MQ=255)
                                                                ttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTACGGCa                                    >  1:2639944/1‑100 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCTCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                                <  1:891911/100‑1 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                                >  2:621158/1‑100 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTAACCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                                >  2:1749741/1‑100 (MQ=255)
                                                                      gAAATATCAGGCCGGCTGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                              <  1:2620192/100‑1 (MQ=255)
                                                                      gAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacc                              <  1:2024141‑M2/100‑71 (MQ=255)
                                                                      gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                              >  2:2337271/1‑100 (MQ=255)
                                                                      gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                              >  1:2049823/1‑100 (MQ=255)
                                                                      gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                              >  1:1310816/1‑100 (MQ=255)
                                                                        aaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATc                            <  1:1808282/100‑1 (MQ=255)
                                                                         atatCAGGCCGGATGCGGCTGCGCCTTATCCGGCGCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGAt                             <  1:1840949/98‑1 (MQ=255)
                                                                         atatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATcc                           >  2:1228529/1‑100 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcgacaccttcaacaaacgtgaagaaacccctact                        <  1:696735‑M2/100‑77 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa                        <  2:2473482/100‑1 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa                        >  1:620392/1‑100 (MQ=255)
                                                                              gGGCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa                      <  2:1942499‑M1/99‑1 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttc                      <  1:307887‑M2/100‑79 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTAACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCAGGCAGCTGGATCCAGATa                      >  2:184866/1‑100 (MQ=255)
                                                                                GCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATaaa                    >  1:2351105‑M1/1‑100 (MQ=255)
                                                                                GCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATaaa                    <  2:1094532‑M1/100‑1 (MQ=255)
                                                                                 CCGGATGCGGCTGCGCCTTAACCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAac                   <  2:1614445‑M1/100‑1 (MQ=255)
                                                                                        cGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCg            <  1:1686020/100‑1 (MQ=255)
                                                                                        cGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCg            >  2:2054332/1‑100 (MQ=255)
                                                                                         ggCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGt           >  1:1334796/1‑100 (MQ=255)
                                                                                             gcgcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTa       <  2:2045428/100‑1 (MQ=255)
                                                                                             gcgcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTa       <  1:76398/100‑1 (MQ=255)
                                                                                             gcgcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCAAGCAAATGGATCCCGATAAACACAATCGTGCt        >  1:1011915/1‑99 (MQ=255)
                                                                                               gcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATg     <  1:1575824/100‑1 (MQ=255)
                                                                                               gcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATg     <  1:2345372/100‑1 (MQ=255)
                                                                                                  ttATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCgg  <  2:2049801/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
ATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGG  >  NC_000913/4587792‑4587989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.