| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 72136 = | NA (NA) | 6 (0.050) | 5/164 | NT | NA | noncoding (1/85 nt) | REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 72169 = | NA (NA) | noncoding (34/85 nt) | REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
GATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGGTAGTGCGTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/72241‑72136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTT > NC_000913/72169‑72267 GATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGGTAGTGCGTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCA < 2:2794141/100‑1GATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGGTAGTGCGTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCA < 2:2695090/100‑1 TACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGGTAGTGCGTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCA < 2:3106477/100‑1 TACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGGTAGTGCGTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCA < 1:3038423/100‑1 CGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGGTAGTGCGTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGG < 1:196042/100‑1 CGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGGTAGTGCGTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGG > 2:219514/1‑100 CGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGGTAGTGCGTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGG < 1:528419/100‑1 GCGTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCAACCGACAGTG > 1:2081045/1‑100 AGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAC > 2:3147244/1‑100 AGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAC > 2:2630699/1‑100 GGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACC > 1:763488/1‑100 CCTGATAAGACGCGGCAAGCGTCGCATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCG > 2:871942/1‑100 TGATAAGACGCAGCAAGCGTCGCATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTA > 1:2658065/1‑100 ATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACT > 1:2936910/1‑100 TCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTC < 2:220041/100‑1 CAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATATTGCCGAAGCACTCG > 2:1449379/1‑100 CAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCG < 1:2768614/100‑1 CAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCG < 2:3233249/100‑1 CAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCG < 2:319313/100‑1 CAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCG > 1:2722809/1‑100 GGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCC > 2:2305691/1‑100 GGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGC > 2:946040/1‑99 GGCCTACAAAACGCACTACCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCC > 2:2113058/1‑100 GCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCT < 2:2936933/100‑1 GCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCT > 1:1729581/1‑100 CCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTT > 2:2419844/1‑100 CCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTT > 1:8131/1‑100 GATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGGTAGTGCGTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/72241‑72136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTT > NC_000913/72169‑72267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |