New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 72136 =NA (NA)6 (0.050) 5/164 NT NA noncoding (1/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 72169 = NA (NA)noncoding (34/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 170 total aligned reads displayed.

GATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTT  >  NC_000913/72070‑72267
                                                                                                   |                                                                                                  
ggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                    >  1:763488‑M1/67‑100 (MQ=255)
gATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                    <  1:3421739/100‑1 (MQ=255)
 gttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt                                                                                                   >  2:3147244‑M1/66‑100 (MQ=255)
 aTGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt                                                                                                   >  1:434749/1‑100 (MQ=255)
  tGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCCGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                                                  <  1:1163103/100‑1 (MQ=255)
    ccGGTGTAAATCGATATTTTGCGTAAAGAGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCATGATGCGACGCTTGCCGCGTCTTATCAGGCCTACa                                                                                                >  1:1229522/1‑100 (MQ=255)
     cGGTGTATATCGATATTTTGCGTAAAGTGGTTTGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaa                                                                                               <  1:1037994/100‑1 (MQ=255)
        tgtATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAc                                                                                            >  2:790564/1‑100 (MQ=255)
        tgtATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAc                                                                                            <  1:2949005/100‑1 (MQ=255)
          tataTCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGc                                                                                          <  2:739473/100‑1 (MQ=255)
          tataTCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGc                                                                                          <  1:376905/100‑1 (MQ=255)
          cactgtcggttgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGc                                                                                          >  1:2081045‑M1/57‑100 (MQ=255)
           atatCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCa                                                                                         <  1:3300730/100‑1 (MQ=255)
            tatCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCAc                                                                                        <  2:30197/100‑1 (MQ=255)
            tatCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCAc                                                                                        >  2:678302/1‑100 (MQ=255)
              tCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTa                                                                                      >  2:1073397/1‑100 (MQ=255)
              tCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTa                                                                                      >  1:1989184/1‑100 (MQ=255)
               cGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAc                                                                                     <  1:1552106/100‑1 (MQ=255)
               cGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAc                                                                                     >  1:2741124/1‑100 (MQ=255)
                 atatTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAccc                                                                                   <  2:2539536/100‑1 (MQ=255)
                      ttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGg                                                                              <  1:491495‑M1/100‑2 (MQ=255)
                         cGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcg                                                                           <  2:146014‑M1/100‑5 (MQ=255)
                          gTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcgg                                                                          >  2:1135634‑M1/1‑95 (MQ=255)
                          gTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcgg                                                                          >  2:1205172‑M1/1‑95 (MQ=255)
                            aaaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggat                                                                        >  1:1004426‑M1/1‑93 (MQ=255)
                               gTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAg                                                                     >  2:3217851/1‑100 (MQ=255)
                               gTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAg                                                                     >  2:1397798/1‑100 (MQ=255)
                               gTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAg                                                                     >  1:906960/1‑100 (MQ=255)
                                tGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAgg                                                                    <  2:2388103/100‑1 (MQ=255)
                                tGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAgg                                                                    <  1:1002825/100‑1 (MQ=255)
                                tGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAgg                                                                    <  2:3138875/100‑1 (MQ=255)
                                  gTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGGTGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGCTAAGGCg                                                                  >  1:1861527/1‑100 (MQ=255)
                                  gTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCg                                                                  <  2:2463007/100‑1 (MQ=255)
                                  gTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCg                                                                  <  1:85643/100‑1 (MQ=255)
                                   ttGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGt                                                                 <  1:2749787/100‑1 (MQ=255)
                                    tGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGtt                                                                >  2:1242410/1‑100 (MQ=255)
                                     ggggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTc                                                               <  1:2733160/100‑1 (MQ=255)
                                     ggggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTAGCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTc                                                               <  1:2336592/100‑1 (MQ=255)
                                      gggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCa                                                              >  2:2137606/1‑100 (MQ=255)
                                      gggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCa                                                              <  2:2405668/100‑1 (MQ=255)
                                        gTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcg                                                            <  1:367639/100‑1 (MQ=255)
                                         tttAGGGGATAGTCTTGTGCGGGTTGCCTGAGGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgc                                                           <  2:495416/100‑1 (MQ=255)
                                         tttAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgc                                                           <  1:1099195/100‑1 (MQ=255)
                                          ttAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgcc                                                          <  1:2168681/100‑1 (MQ=255)
                                          ttAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCACGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgcc                                                          >  2:1536165/1‑100 (MQ=255)
                                            aGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgcctt                                                        <  1:1830431‑M1/100‑24 (MQ=255)
                                            aGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgccgc                                                        >  1:841196/1‑100 (MQ=255)
                                             ggAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCA                                                       >  1:707259‑M2/1‑100 (MQ=255)
                                             ggAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCA                                                       >  2:1378738‑M2/1‑100 (MQ=255)
                                                gaTAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCC                                                    >  1:3380555‑M2/1‑100 (MQ=255)
                                                  tAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGA                                                  <  2:826409‑M2/100‑1 (MQ=255)
                                                   aGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccgac                                                 <  1:804634‑M1/100‑31 (MQ=255)
                                                   aGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATGCGGCGTGAACGCCTTATCCGAC                                                 >  2:3451932‑M2/1‑100 (MQ=255)
                                                   aGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGAC                                                 >  2:3431142‑M2/1‑100 (MQ=255)
                                                    gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccgacc                                                <  1:1976950‑M1/100‑32 (MQ=255)
                                                    gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACa                                                >  2:534576/1‑100 (MQ=255)
                                                    gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGAC                                                 >  1:452167‑M2/1‑99 (MQ=255)
                                                     tCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAg                                               <  2:2983954/100‑1 (MQ=255)
                                                      cTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGt                                              >  1:698090/1‑100 (MQ=255)
                                                      cTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGt                                              >  2:1917881/1‑100 (MQ=255)
                                                       ttGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGtn                                             <  2:3064514/100‑2 (MQ=255)
                                                       ttGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTg                                             <  1:3291980/100‑1 (MQ=255)
                                                         gtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCa                                           <  1:2773992/100‑1 (MQ=255)
                                                         gtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCa                                           <  2:25580/100‑1 (MQ=255)
                                                           gCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATa                                         >  1:1342531/1‑100 (MQ=255)
                                                            cGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCAt                                          <  1:3217827/98‑1 (MQ=255)
                                                             gggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACt                                       <  2:572532/100‑1 (MQ=255)
                                                               gTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTaa                                     >  1:1340426/1‑100 (MQ=255)
                                                                aggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAc                                    >  2:2630699‑M2/36‑100 (MQ=255)
                                                                 tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAcc                                   <  2:1925206/100‑1 (MQ=255)
                                                                 tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAcc                                   <  2:2092225/100‑1 (MQ=255)
                                                                   CCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                 <  1:528419‑M1/100‑1 (MQ=255)
                                                                     tgataagacgcagcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTa                               >  1:2658065‑M2/31‑100 (MQ=255)
                                                                     TGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTa                               <  1:3038423‑M1/100‑1 (MQ=255)
                                                                        TGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATc                            <  2:2794141‑M1/100‑1 (MQ=255)
                                                                        TGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATc                            <  2:2695090‑M1/100‑1 (MQ=255)
                                                                         gCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTCATcc                           >  1:3030108/1‑100 (MQ=255)
                                                                         gCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcc                           >  1:1938156/1‑100 (MQ=255)
                                                                          cGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATccc                          <  2:182677/100‑1 (MQ=255)
                                                                          cGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcc                           <  1:1416200/99‑1 (MQ=255)
                                                                           gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcccc                         >  1:1496127/1‑100 (MQ=255)
                                                                             cGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCATGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCaa                       <  1:2129173/100‑1 (MQ=255)
                                                                             cGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCaa                       >  1:945249/1‑100 (MQ=255)
                                                                                 tGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGt                   >  1:1637239/1‑100 (MQ=255)
                                                                                 tGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGt                   >  2:3177266/1‑100 (MQ=255)
                                                                                     gcgTCTTATCTGGCCTACAAAACGCACTACCCGTAGGTCGGATGCGGCGTGAACGCCTTATCCGACctacgggtagtgcgttttgtaggcctgataagac               >  1:262820‑M2/1‑66 (MQ=255)
                                                                                       gTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggataaggcgttcacgccgcatccgacctacgggtagtgcgttttgtaggccagataagacgc             >  1:262820‑M1/1‑34 (MQ=255)
                                                                                       gTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGaa             >  2:1031291/1‑100 (MQ=255)
                                                                                        tCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAg            <  1:2446055/100‑1 (MQ=255)
                                                                                          ttATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCa          <  2:1556280/100‑1 (MQ=255)
                                                                                           tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc         >  2:3092317/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc         >  1:2794000/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc         >  1:939708/1‑100 (MQ=255)
                                                                                             tcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTc       <  2:220041‑M2/94‑1 (MQ=255)
                                                                                              caggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCg      >  1:2722809‑M2/6‑100 (MQ=255)
                                                                                                ggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc    >  2:2305691‑M2/4‑100 (MQ=255)
                                                                                                ggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGc     >  2:946040‑M2/4‑99 (MQ=255)
                                                                                                ggcCTACAAAACGCACTACCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc    >  2:2113058‑M2/4‑100 (MQ=255)
                                                                                                 gcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCt   >  1:1729581‑M2/3‑100 (MQ=255)
                                                                                                 gcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCt   <  2:2936933‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                  
GATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTT  >  NC_000913/72070‑72267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.