| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2133432 = | NA (NA) | 8 (0.070) | 6/164 | NT | NA | noncoding (1/34 nt) | REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 2133462 = | NA (NA) | noncoding (31/34 nt) | REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
CAGGATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2133537‑2133432‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAAGA > NC_000913/2133462‑2133560 CAGGATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATGACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCA > 1:1916252/1‑100CAGGATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATCACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCA > 1:1915975/1‑100CAGGATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCA > 2:649568/1‑100CAGGATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCA > 1:491229/1‑100CAGGATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCA > 1:3407658/1‑100 GGATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCATC < 2:600089/100‑1 GGATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCATC > 1:53349/1‑100 GATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCATCC > 1:29606/1‑100 TTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGG > 1:2739752/1‑100 TATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGC < 1:3291212/100‑1 GCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTAT > 2:726922/1‑100 GGCCGGATAAGGCGTTCACGCCGCATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCAT > 2:2489181/1‑100 GCCGGATAAGGCGTTCACGCCGCATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATA > 1:1760036/1‑100 GCCGGATAAGGCGTTCACGCCGCATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATA > 2:2189107/1‑100 CCGGATAAGGCGTTCACGCCGCATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAA > 1:2091891/1‑100 CGGATAAGGCGTTCACGCCGCATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAAT > 1:1494525/1‑100 CGGATAAGGCGTTCACGCCGCATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAA > 1:2832032/1‑99 TTCACGCCGCATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGC > 2:3283165/1‑99 ATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTCATTTCGCATCCGACTTATATTCGTATTCTTAATAGCCATAATCCTGATACGCGCTGGCGCGGC < 2:36493/100‑1 TCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCG < 2:2646729/100‑1 TCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCG < 1:291069/100‑1 TCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCG < 2:281787/100‑1 TCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCG < 2:2785429/100‑1 TCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCG > 1:2165012/1‑100 CCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGG > 2:2476731/1‑100 CCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGG < 1:42882/100‑1 CCGGCCCACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATGCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCG < 1:423976/99‑1 CGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGA > 2:2510384/1‑100 CGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGA > 2:1733064/1‑100 CGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGA > 1:3305904/1‑100 CGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGA > 1:1578705/1‑100 GGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAA > 2:1083010/1‑100 CCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAAGA > 2:2945855/1‑100 CAGGATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAACGACGCCTGCATTCGCACCGCCCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2133537‑2133432‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAAGA > NC_000913/2133462‑2133560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |