| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4475322 = | 127 (0.990) | 6 (0.050) | 5/158 | NT | 5.4% | intergenic (+8/‑115) | tabA/yjgL | biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily protein/SopA‑central‑domain‑like hexapeptide repeat protein |
| ? | NC_000913 | 4475352 = | 96 (0.850) | intergenic (+38/‑85) | tabA/yjgL | biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily protein/SopA‑central‑domain‑like hexapeptide repeat protein | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
CTCCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4475430‑4475322‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttacggcgaGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAATAT > NC_000913/4475352‑4475449 CTCCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTAT > 2:1027685/1‑100 TCCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATT > 1:1308091/1‑100 TCCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTAACAAACTCGCCGTAAACCTTGAGTTATT > 1:1503010/1‑100 CCTTGAGTGAATAAGAACGTCTAAGCATTACACATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAACCTAACCGTAAACCTTCAGTTATT > 1:2148209/1‑99 CCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTT > 2:1217427/1‑100 CCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTT > 1:3087415/1‑100 CCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTT > 2:3236099/1‑100 CCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTT > 2:2371064/1‑100 CCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATT > 2:601396/1‑99 CTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTA > 2:1201883/1‑100 CTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTA > 1:840528/1‑100 TTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTAC > 2:1788464/1‑100 TTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTAC < 1:980446/100‑1 TGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACG > 2:3338708/1‑100 TGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACG < 1:6096/100‑1 TGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACG > 1:2056702/1‑100 GAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGG < 2:1068360/100‑1 AGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGC < 2:1659538/100‑1 AGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGC > 1:159663/1‑100 AGTGAATAAGAACGTCTAAGCATTACAAATTTAAAAAAAAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGC < 1:3381931/100‑1 GTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCG < 2:2146355/100‑1 GTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCG < 1:404928/100‑1 GTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCG > 1:613134/1‑100 GTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCG > 1:998138/1‑100 CACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTG > 2:830700/1‑100 AAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGT > 2:867922/1‑100 CAAACTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTT > 1:23975/1‑100 CAAACTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTT > 2:2289869/1‑100 AACTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTAT < 1:830693/100‑1 CTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTC > 2:1377099/1‑100 TTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAG > 1:2034232/1‑100 TTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAG < 2:1614953/100‑1 TTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAG < 1:3131509/100‑1 TTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAG < 2:3003680/100‑1 TTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAG < 2:2901816/100‑1 TTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGC < 1:378626/100‑1 TACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCA < 2:2660005/100‑1 CGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGATTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAA > 1:2550577/1‑100 CGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAA > 1:2969281/1‑100 CGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAA > 2:3411505/1‑100 CGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAA > 2:1470440/1‑100 CGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAA < 1:1320278/100‑1 GGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAA < 2:2317662/100‑1 GGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAA > 2:427219/1‑100 GCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAAT < 2:1213426/100‑1 GCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAAT > 1:27217/1‑100 GCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAAT > 1:3009790/1‑100 GAGTTTGTGAAACCAGCGTTTTTTGGTATTTTTTTGTGAGTAAAATTGGTACTACTGAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAATAT > 2:3443378/1‑100 CTCCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4475430‑4475322‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttacggcgaGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAATAT > NC_000913/4475352‑4475449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |