New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4475322 =127 (0.990)6 (0.050) 5/158 NT 5.4% intergenic (+8/‑115) tabA/yjgL biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily protein/SopA‑central‑domain‑like hexapeptide repeat protein
?NC_000913 4475352 = 96 (0.850)intergenic (+38/‑85) tabA/yjgL biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily protein/SopA‑central‑domain‑like hexapeptide repeat protein
Rejected: Frequency below cutoff threshold.

Only 100 of 177 total aligned reads displayed.

TGTTTTATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATT  >  NC_000913/4475223‑4475419
                                                                                                   |                                                                                                 
tgtTTTATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACtttt                                                                                                   >  2:174137/1‑100 (MQ=255)
tgtTTTATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACtttt                                                                                                   >  1:3053319/1‑100 (MQ=255)
 nttttATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTc                                                                                                  >  2:1288524/2‑100 (MQ=255)
 gtTTTATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTc                                                                                                  >  2:1845615/1‑100 (MQ=255)
  ttttATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCg                                                                                                 <  1:2905486/100‑1 (MQ=255)
  ttttATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCg                                                                                                 <  2:1812397/100‑1 (MQ=255)
  ttttATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCg                                                                                                 >  2:1897789/1‑100 (MQ=255)
   tttATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGc                                                                                                >  1:1154050/1‑100 (MQ=255)
   tttATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGc                                                                                                >  2:2605412/1‑100 (MQ=255)
   tttATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGc                                                                                                <  2:2207291/100‑1 (MQ=255)
   attttgctcatgacgaactccttgagtgaataagaacgtctaagcattacaaattttactcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGc                                                                                                <  2:1213426‑M1/4‑1 (MQ=255)
    ttttgctcatgacgaactccttgagtgaataagaacgtctaagcattacaaattttactcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGcc                                                                                               <  2:2317662‑M1/5‑1 (MQ=255)
    ttATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGcc                                                                                               <  2:3023459/100‑1 (MQ=255)
     tttgctcatgacgaactccttgagtgaataagaacgtctaagcattacaaattttactcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGCCg                                                                                              >  1:2969281‑M1/95‑100 (MQ=255)
     tttgctcatgacgaactccttgagtgaataagaacgtctaagcattacaaattttactcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGCCg                                                                                              <  1:1320278‑M1/6‑1 (MQ=255)
     tttgctcatgacgaactccttgagtgaataagaacgtctaagcattacaaattttaatcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGCCg                                                                                              >  1:2550577‑M1/95‑100 (MQ=255)
     tATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCg                                                                                              <  1:2601576/100‑1 (MQ=255)
      aTCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGt                                                                                             <  1:1556436/100‑1 (MQ=255)
       tCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTa                                                                                            <  1:1694473/100‑1 (MQ=255)
        gctcatgacgaactccttgagtgaataagaacgtctaagcattacaaattttactcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGCCGTaa                                                                                           <  1:378626‑M1/9‑1 (MQ=255)
         ctcatgacgaactccttgagtgaataagaacgtctaagcattacaaattttactcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGCCGTaaa                                                                                          <  2:2901816‑M1/10‑1 (MQ=255)
         ctcatgacgaactccttgagtgaataagaacgtctaagcattacaaattttactcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGCCGTaaa                                                                                          <  2:1614953‑M1/10‑1 (MQ=255)
         cGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTaaa                                                                                          >  2:903537/1‑100 (MQ=255)
         cGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTaaa                                                                                          >  1:2821771/1‑100 (MQ=255)
          gggggAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAAt                                                                                         >  1:1201872/1‑100 (MQ=255)
           ggggAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATa                                                                                        <  1:874731/100‑1 (MQ=255)
            gggAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATaa                                                                                       <  2:1336765/100‑1 (MQ=255)
             ggAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAAc                                                                                      <  2:728893/100‑1 (MQ=255)
              gAAGTGCATAAACCGCTGTGCGCAGTGGGTGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACt                                                                                     <  1:1384555/100‑1 (MQ=255)
              gAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACt                                                                                     >  2:2985260/1‑100 (MQ=255)
                   gCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAgg                                                                                >  2:2420733/1‑100 (MQ=255)
                   gCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAgg                                                                                <  1:2565035/100‑1 (MQ=255)
                    cATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGt                                                                               <  1:2010410/100‑1 (MQ=255)
                      tAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGttt                                                                             >  2:2056719/1‑100 (MQ=255)
                      tAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGttt                                                                             >  1:2724888/1‑100 (MQ=255)
                       aaaCCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTa                                                                            <  2:355993/100‑1 (MQ=255)
                        aaCCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTAc                                                                           >  2:2664284/1‑100 (MQ=255)
                        aaCCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTAc                                                                           <  2:2658821/100‑1 (MQ=255)
                          ccGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACgg                                                                         >  1:1983502/1‑100 (MQ=255)
                           cGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGTAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGc                                                                        <  1:2433418/100‑1 (MQ=255)
                            gCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCg                                                                       >  2:2339749/1‑100 (MQ=255)
                              tgtgCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAg                                                                     <  2:953965/100‑1 (MQ=255)
                              tgtgCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAg                                                                     <  1:1277814/100‑1 (MQ=255)
                              gaataagaacgtctaagcattacaaattttactcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGCCGTAAATAACTCAAGGTTTACGGCGAg                                                                     >  2:1377099‑M1/70‑100 (MQ=255)
                                tgCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAggt                                                                   >  2:157568/1‑98 (MQ=255)
                                ataagaacgtctaagcattacaaattttactcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGCCGTAAATAACTCAAGGTTTACGGCGAGtt                                                                   <  1:830693‑M1/33‑1 (MQ=255)
                                  cgcAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTtg                                                                 <  1:2991188/100‑1 (MQ=255)
                                  cgcAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTtg                                                                 <  1:2605393/100‑1 (MQ=255)
                                  aagaacgtctaagcattacaaattttactcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTtg                                                                 >  2:2289869‑M1/66‑100 (MQ=255)
                                  aagaacgtctaagcattacaaattttactcacaaaaaaatatcaaaaaacgctcttttcacaaacTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTtg                                                                 >  1:23975‑M1/66‑100 (MQ=255)
                                    cAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTtgtg                                                               >  2:3257913/1‑100 (MQ=255)
                                     aGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGa                                                              <  1:2173092/100‑1 (MQ=255)
                                        gggCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGaaaa                                                           >  2:1503024/1‑100 (MQ=255)
                                         ggCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAag                                                          <  1:1101358/100‑1 (MQ=255)
                                          gcgcgcCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAaga                                                         <  2:1066715/100‑1 (MQ=255)
                                           cgcgcCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAagag                                                        >  1:931931/1‑100 (MQ=255)
                                            gcgcCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGc                                                       >  1:601392/1‑100 (MQ=255)
                                             cgcCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCg                                                      >  2:2463892/1‑100 (MQ=255)
                                             cgcCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCg                                                      >  2:613138/1‑100 (MQ=255)
                                                  gCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGttttt                                                 >  2:2530716/1‑100 (MQ=255)
                                                   cccAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGtttttt                                                >  2:3174021/1‑100 (MQ=255)
                                                   cccAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGtttttt                                                <  2:812597/100‑1 (MQ=255)
                                                    ccAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTg                                               <  2:257135/100‑1 (MQ=255)
                                                    ccAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTg                                               <  2:621492/100‑1 (MQ=255)
                                                    ccAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTg                                               <  2:3339032/100‑1 (MQ=255)
                                                      aGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGat                                             <  1:3222064/100‑1 (MQ=255)
                                                      aGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGat                                             <  2:3422445/100‑1 (MQ=255)
                                                            gCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATAttttt                                       >  1:1174137/1‑100 (MQ=255)
                                                            gCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATAttttt                                       >  1:3338684/1‑100 (MQ=255)
                                                               taGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTtg                                    <  2:553026/99‑1 (MQ=255)
                                                               aaGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTtg                                    <  2:438910/100‑1 (MQ=255)
                                                               aaGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTtg                                    <  1:2085438/100‑1 (MQ=255)
                                                                aGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTtga                                   >  1:553022/1‑99 (MQ=255)
                                                                 caaaaaaatatcaaaaaacgctcttttcacaaacTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTtgtg                                  >  2:830700‑M1/35‑100 (MQ=255)
                                                                  cAGTAGTGAAGATGCTGATGGCGTGATGACTTTTAGACGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGa                                 <  1:903530/100‑1 (MQ=255)
                                                                   agtagtGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAg                                <  1:185843/100‑1 (MQ=255)
                                                                      agtGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTgagatcgg                             >  2:763927/1‑96 (MQ=255)
                                                                      agtGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTaa                             >  2:2626446/1‑100 (MQ=255)
                                                                      agtGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTaa                             >  1:58503/1‑100 (MQ=255)
                                                                        tGAAGATGCTGAAGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTaaaa                           >  2:2274385/1‑100 (MQ=255)
                                                                            gATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTg                       <  1:828459/100‑1 (MQ=255)
                                                                             aTGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGt                      <  2:845615/100‑1 (MQ=255)
                                                                             aTGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGt                      <  1:661199/100‑1 (MQ=255)
                                                                              tGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTa                     >  2:363034/1‑100 (MQ=255)
                                                                                cTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAAt                   <  2:1676495/100‑1 (MQ=255)
                                                                                  gATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGc                 <  1:3165996/100‑1 (MQ=255)
                                                                                    tGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCtt               >  1:388596/1‑100 (MQ=255)
                                                                                      gCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAg             <  1:1004371/100‑1 (MQ=255)
                                                                                      gCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAg             <  1:747/100‑1 (MQ=255)
                                                                                       cGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTTTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAAt                   >  1:3142748/1‑93 (MQ=255)
                                                                                       cGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTa              >  1:1000022/1‑98 (MQ=255)
                                                                                       cGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGa            >  1:60707/1‑100 (MQ=255)
                                                                                        gTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGa            >  1:894218/1‑99 (MQ=255)
                                                                                         tgatgaCTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACg          <  1:1114427/100‑1 (MQ=255)
                                                                                             gaCTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCt      >  1:508242/1‑100 (MQ=255)
                                                                                             gaCTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCt      <  2:3275272/100‑1 (MQ=255)
                                                                                              aCTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTTTTTTTTTTTTTTGAGAAAAATTTGTAAAGCTTATACGTtttt     >  1:2961480/1‑100 (MQ=255)
                                                                                               cTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTa    >  2:1597376/1‑100 (MQ=255)
                                                                                                ttttCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTAt   <  2:2818886/100‑1 (MQ=255)
                                                                                                 tttCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTAtt  <  2:409099/100‑1 (MQ=255)
                                                                                                   |                                                                                                 
TGTTTTATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATT  >  NC_000913/4475223‑4475419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.