| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4035360 | NA (NA) | 16 (0.130) | 8/166 | NT | 100% | intergenic (+207/‑171) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon |
| ? | NC_000913 | = 4035384 | 0 (0.000) | intergenic (+231/‑147) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon | |||||
GGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAA > NC_000913/4035280‑4035459 | ggTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAATTGCTTGACTCTGTAGCGGGCAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAA > 1:1886694‑M2/1‑100 (MQ=255) gTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTATTGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAG > 2:2018253‑M2/1‑100 (MQ=255) gTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAG > 1:1130297‑M2/1‑100 (MQ=255) gTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAG > 2:2101398‑M2/1‑100 (MQ=255) ttCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGC < 1:1488643‑M2/100‑1 (MQ=255) ctcCTGAGAACTCCGGCGGAGAAAGCAACACTAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGG < 1:2284333‑M2/100‑1 (MQ=255) ctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGG < 2:786149‑M2/100‑1 (MQ=255) ctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGG < 2:57194‑M2/100‑1 (MQ=255) ctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGG > 2:3360416‑M2/1‑100 (MQ=255) ctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGG < 1:3412801‑M2/100‑1 (MQ=255) ctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGG < 2:2969692‑M2/100‑1 (MQ=255) ctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGG < 2:249808‑M2/100‑1 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC < 2:851421‑M2/100‑1 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 1:1118518‑M2/1‑100 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 2:2386010‑M2/1‑100 (MQ=255) tGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGCATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 1:534717‑M2/1‑97 (MQ=255) ggAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttattttt < 2:2548822‑M2/100‑52 (MQ=255) agcGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctt < 1:2049358‑M2/99‑56 (MQ=255) cGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttc < 2:895987‑M2/100‑58 (MQ=255) cacaCCCCGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggcgtgcataatacgccttcccgctacacagacaagcatttatttttgctttctctgtc < 1:2761927‑M2/97‑64 (MQ=255) ccccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 1:2100132‑M2/100‑71 (MQ=255) cgcgCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatatgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 2:138631‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 2:2094371‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 1:1616019‑M2/100‑74 (MQ=255) gcgcCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcag < 1:1624135‑M2/100‑75 (MQ=255) gcgcCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcag < 1:375484‑M2/100‑75 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:2001802‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:566299‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:2636023‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCAACGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccgcagatctcag < 1:2801968‑M2/99‑75 (MQ=255) | GGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAA > NC_000913/4035280‑4035459 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |