BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3234638 =	NA (NA)	6 (0.050)	5/164	NT	NA	noncoding (1/86 nt)	REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	3234671 =	NA (NA)	6 (0.050)	5/164	NT	NA	noncoding (34/86 nt)	REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 153 total aligned reads displayed.

ATGTAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTC  >  NC_000913/3234572‑3234769

ttgggagttacctgccggatgcggcgtaaacgccttatccggcctacgttcagcacgttactccagGCCGGATGCGACGCTTGCCGCGTCTTATCCGGcc                                                                                                    >  1:451722‑M1/67‑100 (MQ=255)

 tGTAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCt                                                                                                   >  1:3026270/1‑100 (MQ=255)

  gggagttacctgccggatgcggcgtaaacgccttatccggcctacgttcagcacgttactccagGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTg                                                                                                  >  1:561569‑M1/65‑100 (MQ=255)

  gTAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTg                                                                                                  >  1:25722/1‑100 (MQ=255)

  gTAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTg                                                                                                  >  2:2373322/1‑100 (MQ=255)

  gTAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTg                                                                                                  <  2:338947/100‑1 (MQ=255)

   tAGACGATGGTGACATGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTgg                                                                                                 <  2:3404135/100‑1 (MQ=255)

   tAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTgn                                                                                                 <  1:770788/100‑2 (MQ=255)

   tAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTgg                                                                                                 <  2:2033512/100‑1 (MQ=255)

   tAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAACGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTgg                                                                                                 >  2:2444117/1‑100 (MQ=255)

    aGACGATGGTGACAGGGATTTTTTTTTTTTTTGTAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGcc                                                                                                    >  1:2306605/1‑96 (MQ=37)

    aGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGa                                                                                                >  1:569691/1‑100 (MQ=255)

     gACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAg                                                                                               >  1:1118837/1‑100 (MQ=255)

       cGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTa                                                                                             >  1:1012887/1‑100 (MQ=255)

       cGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTa                                                                                             >  2:1141976/1‑100 (MQ=255)

        gATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACAGTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTaa                                                                                            >  1:2214795/1‑100 (MQ=255)

         aTGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGGCATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAAc                                                                                           <  1:3160784/100‑1 (MQ=255)

          tGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACg                                                                                          <  1:2470437/100‑1 (MQ=255)

          tGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACg                                                                                          <  2:3179363/100‑1 (MQ=255)

             tGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGc                                                                                       >  1:2666196/1‑100 (MQ=255)

              gACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCt                                                                                      <  1:1455381/100‑1 (MQ=255)

               aCAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTg                                                                                     <  1:1762549/100‑1 (MQ=255)

                 aGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGaa                                                                                   <  1:2694172/100‑1 (MQ=255)

                  gggATTTTCTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGCAc                                                                                  >  1:24051/1‑100 (MQ=255)

                    gATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGt                                                                                <  2:1874917/100‑1 (MQ=255)

                       tttttGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAgg                                                                             <  1:3119841/100‑1 (MQ=255)

                       tttttGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAgg                                                                             <  1:1901426/100‑1 (MQ=255)

                            gTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGa                                                                        >  1:431734/1‑100 (MQ=255)

                             ttttATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGAt                                                                       <  2:1055092/100‑1 (MQ=255)

                              tttATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATa                                                                      <  2:25722/100‑1 (MQ=255)

                               ttATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATaa                                                                     >  1:1804318/1‑100 (MQ=255)

                                tATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAg                                                                    >  1:2376288/1‑100 (MQ=255)

                                tATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAg                                                                    >  2:175346/1‑100 (MQ=255)

                                 aTGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAgg                                                                   <  2:1577578/100‑1 (MQ=255)

                                  tGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATACGGc                                                                  >  2:284297/1‑100 (MQ=255)

                                   ggAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCg                                                                 <  2:2976709/100‑1 (MQ=255)

                                     aaGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGtt                                                               <  2:670387/100‑1 (MQ=255)

                                     aaGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGtt                                                               <  2:1040708/100‑1 (MQ=255)

                                      aGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGttt                                                              <  1:109196/100‑1 (MQ=255)

                                      aGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGttt                                                              <  2:1743150/100‑1 (MQ=255)

                                      aGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGttt                                                              <  2:1803454/100‑1 (MQ=255)

                                       gcgcGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTa                                                             <  2:824667/100‑1 (MQ=255)

                                          cgATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTAcgc                                                          <  2:2689661/100‑1 (MQ=255)

                                          cgATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTAcgc                                                          <  1:881105/100‑1 (MQ=255)

                                           gATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTAcgcc                                                         <  2:1154598/100‑1 (MQ=255)

                                               ccAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCAt                                                     >  2:211197/1‑100 (MQ=255)

                                                cAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                    <  1:2903001/100‑1 (MQ=255)

                                                 aGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                   <  2:1841205/100‑1 (MQ=255)

                                                   aaCTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                 <  1:2373303/100‑1 (MQ=255)

                                                    aCTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                >  2:2777906/1‑100 (MQ=255)

                                                    aCTGGGCAGACATTGCCGGACGCGACGCTTGCCGCGTCGTATCCGGCCTGGCGTAACGTGCTCAACGCACGCGGGATAACGCGTTTAccccccgcgcggc                                                >  1:2693000/1‑91 (MQ=21)

                                                      tGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAg                                              <  2:1855175/100‑1 (MQ=255)

                                                      tGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAg                                              >  1:2292826/1‑100 (MQ=255)

                                                            gACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACt                                        >  2:2650218/1‑100 (MQ=255)

                                                            gACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACt                                        <  2:2617639/100‑1 (MQ=255)

                                                            gACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACt                                        <  2:2994643/100‑1 (MQ=255)

                                                            gACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACt                                        >  1:2493130/1‑100 (MQ=255)

                                                            gACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGACGCATCCGGAAggca                                           >  2:2016230/1‑95 (MQ=255)

                                                                 tGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGGTAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCaa                                   <  1:1857256/100‑1 (MQ=255)

                                                                 ggccggataagacgcggcaagcgtcgcatccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCaa                                   >  1:451722‑M2/35‑100 (MQ=255)

                                                                  gccggataagacgcggcaagcgtcgcatccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCa                                    >  1:500031‑M2/34‑98 (MQ=255)

                                                                  gccggataagacgcggcaagcgtcgcatccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAAt                                  >  2:2533499‑M2/34‑100 (MQ=255)

                                                                   ccggataagacgcggcaagcgtcgcatccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTCACTCCCAATc                                 >  1:2254626‑M2/33‑100 (MQ=255)

                                                                   CCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATc                                 >  2:2697084‑M1/1‑100 (MQ=255)

                                                                    CGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCt                                >  1:3027042‑M1/1‑100 (MQ=255)

                                                                    CGGATGCGACGCTTGCCGCGTCTTATCCGACCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCt                                <  1:1181150‑M1/100‑1 (MQ=255)

                                                                     ggataagacgcggcaagcgtcgcatccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGATTCCGCCGCATCCGGCAGGTAACTCCCAATCtt                               >  1:1067427‑M2/31‑100 (MQ=255)

                                                                     GGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATctn                               >  1:345633‑M1/1‑99 (MQ=255)

                                                                     GGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCtt                               <  2:1219731‑M1/100‑1 (MQ=255)

                                                                       ATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTAc                             >  2:569695‑M1/1‑100 (MQ=255)

                                                                       ATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTAc                             >  2:2306623‑M1/1‑100 (MQ=255)

                                                                        TGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTAcc                            <  1:1010571‑M1/100‑1 (MQ=255)

                                                                        TGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTAcc                            >  1:984505‑M1/1‑100 (MQ=255)

                                                                        TGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTAcc                            >  1:1737906‑M1/1‑100 (MQ=255)

                                                                        TGCGACGCGTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTAcc                            >  1:175345‑M1/1‑100 (MQ=255)

                                                                         gCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGCACGTAGGCCGGATAAGGCGTTTACGCCGCCTCCGGCAGGTAACTCCCAATCTTACcg                           >  1:1064368/1‑100 (MQ=255)

                                                                         gCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACcg                           <  2:1185259/100‑1 (MQ=255)

                                                                          cGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATGCGGCAGGTAACTCCCAATCTTACcga                          <  2:2110063/100‑1 (MQ=255)

                                                                           gACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACcgac                         >  2:1896914/1‑100 (MQ=255)

                                                                            aCGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACcgacg                        <  1:2444098/100‑1 (MQ=255)

                                                                                 tGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTc                   <  1:2034581/100‑1 (MQ=255)

                                                                                 tGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTc                   <  1:211195/100‑1 (MQ=255)

                                                                                  gCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTcc                  <  1:3223383/100‑1 (MQ=255)

                                                                                   ccGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGGATCCGGCAGGTAACTCCCAATCTTACCGACGACGTccc                 <  1:2128976/100‑1 (MQ=255)

                                                                                    cgcgTCTTATCCGGCCTGGAGTACCGTGCTGAAAGTAGGCCGGATAAGGCGTTTACGCAGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCa                <  1:284295/100‑1 (MQ=255)

                                                                                    cgcgTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCa                <  2:2154456/100‑1 (MQ=255)

                                                                                    cgcgTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCa                >  1:1233436/1‑100 (MQ=255)

                                                                                       gTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCt             <  1:474670/100‑1 (MQ=255)

                                                                                       gTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCt             <  1:3238980/100‑1 (MQ=255)

                                                                                       gTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCt             <  1:2823707/100‑1 (MQ=255)

                                                                                        tCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGCTAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCtt            >  1:1716841/1‑100 (MQ=255)

                                                                                           tATCAGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCAc         >  1:203821/1‑100 (MQ=255)

                                                                                            atccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCAcc        <  1:1899784‑M2/93‑1 (MQ=255)

                                                                                            atccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCAcc        <  2:427902‑M2/93‑1 (MQ=255)

                                                                                             tccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCg       >  2:3046944‑M2/7‑100 (MQ=255)

                                                                                               cggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCt     >  2:2400930‑M2/5‑100 (MQ=255)

                                                                                               cggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCt     >  1:1510271‑M2/5‑100 (MQ=255)

                                                                                                ggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCtt    <  2:1368318‑M2/97‑1 (MQ=255)

                                                                                                 gcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCttt   <  1:1684460‑M2/98‑1 (MQ=255)

                                                                                                  cCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTc  <  2:909382‑M2/99‑1 (MQ=255)

ATGTAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTC  >  NC_000913/3234572‑3234769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.