New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3754860 =NA (NA)11 (0.090) 7/164 NT NA noncoding (1/82 nt) REP270 (repetitive extragenic palindromic) element; contains 2 REP sequences REP270 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3754890 = NA (NA)noncoding (31/82 nt) REP270 (repetitive extragenic palindromic) element; contains 2 REP sequences REP270 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 213 total aligned reads displayed.

TTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGCCCCAACG  >  NC_000913/3754791‑3754989
                                                                                                   |                                                                                                   
ttGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGcc                                                                                                     <  2:150357/100‑1 (MQ=255)
 gcattgggtattcattgcctgatgcgacgcttacgcgtcttatcatgcctacgggaacctgaccgtagGCCGGATGCGGCGTGTACGCCTTATCCGGCCt                                                                                                    >  1:205635‑M1/69‑100 (MQ=255)
  ggCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTa                                                                                                   >  1:3384915/1‑100 (MQ=255)
  ggCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTa                                                                                                   >  1:1301284/1‑100 (MQ=255)
   gCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTAc                                                                                                  >  2:1758385/1‑100 (MQ=255)
    cGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACg                                                                                                 >  2:3174066/1‑100 (MQ=255)
     gTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACgg                                                                                                <  2:1639503/100‑1 (MQ=255)
       aGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTc                                                                                              >  2:1700891/1‑100 (MQ=255)
        gTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCa                                                                                             <  1:2998732/100‑1 (MQ=255)
        gTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCa                                                                                             >  2:1966151/1‑100 (MQ=255)
          cTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAgg                                                                                           <  1:1613116/100‑1 (MQ=255)
          cTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAgg                                                                                           >  1:3259402/1‑100 (MQ=255)
          cTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAgg                                                                                           <  1:357657/100‑1 (MQ=255)
           tGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGt                                                                                          <  1:446112/100‑1 (MQ=255)
            gtgTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGtt                                                                                         >  1:2556317/3‑100 (MQ=255)
             ggTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTc                                                                                        >  2:1105747/1‑100 (MQ=255)
              gTTATTTCGCACGTAGGTTTAACTCGGAAATCCTGACCACGGGCGCTTTCTTTATGCCGTATGCGGCGTGTACGCCGTATCCGGCCTACGGTCa                                                                                             <  1:3324658/94‑1 (MQ=19)
                tATTGCGCACTTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCg                                                                                     <  1:2264824/100‑1 (MQ=255)
                tATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCTGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCg                                                                                     <  1:1859975/100‑1 (MQ=255)
                 aTTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGt                                                                                    >  2:2253466/1‑100 (MQ=255)
                  ttGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTa                                                                                   <  2:1180861/100‑1 (MQ=255)
                   tGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAg                                                                                  <  2:103746/100‑1 (MQ=255)
                    gcgcACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAgg                                                                                 <  1:1501900/100‑1 (MQ=255)
                       cACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCAt                                                                              >  2:910492/1‑100 (MQ=255)
                         cGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGa                                                                            <  1:1894353/100‑1 (MQ=255)
                          gTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGAt                                                                           <  2:2726121/100‑1 (MQ=255)
                           tAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATa                                                                          <  1:1157388/100‑1 (MQ=255)
                           tAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATa                                                                          <  2:3259426/100‑1 (MQ=255)
                           tAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATa                                                                          <  1:1802214/100‑1 (MQ=255)
                            aGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATaa                                                                         <  1:2392121/100‑1 (MQ=255)
                               tttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGAc                                                                      <  1:2804038/100‑1 (MQ=255)
                               tttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGAc                                                                      <  1:1127427/100‑1 (MQ=255)
                                ttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGAcg                                                                     >  1:3059073/1‑100 (MQ=255)
                                  aaaaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGAcgcg                                                                   <  1:258708/100‑1 (MQ=255)
                                  aaaaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGAcgcg                                                                   >  1:628847/1‑100 (MQ=255)
                                   aaaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGt                                                                  >  1:2458887/1‑100 (MQ=255)
                                    aaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTa                                                                 >  1:1921430/1‑100 (MQ=255)
                                    aaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTa                                                                 <  2:3237339/100‑1 (MQ=255)
                                     aCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTaa                                                                >  2:3333685/1‑100 (MQ=255)
                                      cGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAg                                                               <  1:646694/100‑1 (MQ=255)
                                      cGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAg                                                               >  2:1317461/1‑100 (MQ=255)
                                      cGTAAATTGTAACAACGAGCGCTTTGTTTATGCCGGATGCAGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCAGGATAAGACGCGTAAg                                                               >  1:3133677/1‑100 (MQ=255)
                                           aTTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCg                                                          >  2:377286/1‑100 (MQ=255)
                                             tGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTAAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCa                                                        >  2:835106/1‑100 (MQ=255)
                                              gTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCAt                                                       >  2:2619889/1‑100 (MQ=255)
                                                aacaacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCa                                                     >  1:1377065/1‑100 (MQ=255)
                                                 acaacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAg                                                    >  2:1733330/1‑100 (MQ=255)
                                                   aacGTGCGCTTTGTTTATGCCGGATTCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGc                                                  <  2:634988/100‑1 (MQ=255)
                                                     cGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCaa                                                >  2:1416932/1‑100 (MQ=255)
                                                     cGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCaa                                                >  2:3121300/1‑100 (MQ=255)
                                                      gTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAAt                                               <  2:464693/100‑1 (MQ=255)
                                                      gTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAAt                                               <  2:3071409/100‑1 (MQ=255)
                                                        gcgcGTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGACAGGTTCTCGTAGGCATGATAAGACGCGTAAGCGTGGCATCAGGCAATg                                              <  1:59082/99‑1 (MQ=25)
                                                         cgcTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGTATCAGGCAATgta                                            <  2:2333046/100‑3 (MQ=255)
                                                           cTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATa                                          <  1:3333661/100‑1 (MQ=255)
                                                           cTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGCCGCATCAGGCAATGAATa                                          >  2:302354/1‑100 (MQ=255)
                                                            tttGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATAc                                         <  2:543620/100‑1 (MQ=255)
                                                             ttGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGTATAATAAGACGCGTAAGCGTCGCACCAGGCAATGAATAcc                                        <  1:817987/100‑1 (MQ=255)
                                                              tGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATAccc                                       <  1:2795884/100‑1 (MQ=255)
                                                               gTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCa                                      <  2:1139532/100‑1 (MQ=255)
                                                               gTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCa                                      <  1:2286413/100‑1 (MQ=255)
                                                               gTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCa                                      >  2:1658077/1‑100 (MQ=255)
                                                               gTTTATGCCGGATGCGGCGTGTACCCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCa                                      <  1:2339157/100‑1 (MQ=255)
                                                               ccgtagGCCGGATAAGGCGTACACGCCGCATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCa                                      <  1:547106‑M1/94‑1 (MQ=255)
                                                                cgtaggccggataaggcgtacacgccgcatccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCaa                                     >  2:401214‑M2/36‑100 (MQ=255)
                                                                cgtaggccggataaggcgtacacgccgcatccggcATACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCaa                                     >  1:3201786‑M2/36‑100 (MQ=255)
                                                                 ttATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAAt                                    <  1:2965554/100‑1 (MQ=255)
                                                                 gtaggccggataaggcgtacacgccgcatccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAAt                                    >  2:88406‑M2/35‑100 (MQ=255)
                                                                  tATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATg                                   <  2:2993381/100‑1 (MQ=255)
                                                                  tATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATg                                   <  2:3384940/100‑1 (MQ=255)
                                                                   aTGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGc                                  >  1:232326/1‑100 (MQ=255)
                                                                    tGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCg                                 >  2:420121/1‑100 (MQ=255)
                                                                    ggccggataaggcgtacacgccgcatccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCg                                 >  2:2076476‑M2/32‑100 (MQ=255)
                                                                      CCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGAc                               >  2:223588‑M1/1‑100 (MQ=255)
                                                                      CCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGAc                               <  2:2157938‑M1/100‑1 (MQ=255)
                                                                      CCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGAc                               >  2:2798037‑M1/1‑100 (MQ=255)
                                                                      CCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGAc                               <  2:616263‑M1/100‑1 (MQ=255)
                                                                        ggataaggcgtacacgccgcatccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCa                             >  1:358538‑M2/28‑100 (MQ=255)
                                                                        GGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGAcc                              >  1:3287823‑M1/1‑99 (MQ=255)
                                                                        GGATAAGGCGTACACGCCGCATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCa                             <  1:2657811‑M1/100‑1 (MQ=255)
                                                                         gataaggcgtacacgccgcatccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAg                            >  2:2883378‑M2/27‑100 (MQ=255)
                                                                         gataaggcgtacacgccgcatccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAg                            >  2:534819‑M2/27‑100 (MQ=255)
                                                                          ATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGc                           >  1:1585716‑M1/1‑100 (MQ=255)
                                                                               gcgTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGcttc                        <  1:2678136/98‑1 (MQ=255)
                                                                                cgTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTta                     <  1:680145/100‑1 (MQ=255)
                                                                                  tacaCGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTtata                   >  1:1987103/4‑100 (MQ=255)
                                                                                   gtACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTatat                  <  1:2641442/100‑1 (MQ=255)
                                                                                   gtACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTatat                  <  1:1758369/100‑1 (MQ=255)
                                                                                   gtACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTatat                  >  1:1287794/1‑100 (MQ=255)
                                                                                    tACGCCTTATCCGGCCTACGGTCAGGTACCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATc                 <  1:547182/100‑1 (MQ=255)
                                                                                     aCGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCa                <  2:2461809/100‑1 (MQ=255)
                                                                                     aCGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCa                >  1:2181809/1‑100 (MQ=255)
                                                                                     aCGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCa                <  2:715533/100‑1 (MQ=255)
                                                                                      cGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAg               <  2:85355/100‑1 (MQ=255)
                                                                                       gCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGa              >  1:3439788/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGaa             <  1:1700875/100‑1 (MQ=255)
                                                                                         cTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAAc            <  2:69908/100‑1 (MQ=255)
                                                                                             tccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGcc        <  2:2765121‑M2/94‑1 (MQ=255)
                                                                                             tccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGcc        >  1:484123‑M2/7‑100 (MQ=255)
                                                                                                   cTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGCCCCAACg  <  2:946864/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGCCCCAACG  >  NC_000913/3754791‑3754989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.