BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4094320 =	NA (NA)	9 (0.080)	5/164	NT	NA	noncoding (5/402 nt)	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences
*	?	NC_000913	4094350 =	NA (NA)	9 (0.080)	5/164	NT	NA	noncoding (35/402 nt)	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences

Only 100 of 220 total aligned reads displayed.

AGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATG  >  NC_000913/4094251‑4094449

 tcaggcctacaggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattGCCGGATAAGGCGCTCGCGCCGCATCCGGcaa                                                                                                    >  2:2272776‑M1/69‑100 (MQ=255)

  caggcctacaggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattGCCGGATAAGGCGCTCGCGCCGCATCCGGcaat                                                                                                   >  1:519048‑M1/68‑100 (MQ=255)

      gAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGcaatcaat                                                                                               >  2:421786/1‑100 (MQ=255)

       aGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATg                                                                                              <  2:1702511/100‑1 (MQ=255)

       aGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATg                                                                                              <  1:1316656/100‑1 (MQ=255)

        tacaggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGc                                                                                             >  1:1821471‑M1/62‑100 (MQ=255)

        gTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGc                                                                                             <  1:39099/100‑1 (MQ=255)

        gTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGc                                                                                             >  1:1526945/1‑100 (MQ=255)

        gTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGc                                                                                             >  2:2734897/1‑100 (MQ=255)

         tAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGcc                                                                                            <  1:3071920/100‑1 (MQ=255)

           aTGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTg                                                                                          >  2:2773794/1‑100 (MQ=255)

           aTGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGGTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTg                                                                                          <  1:1964724/100‑1 (MQ=255)

            tGTTTTGCATGTTCTGTGTTCGTGTTAATTCGGTGTTGTCGGATCCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTg                                                                                          <  1:858232/99‑1 (MQ=255)

            tGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGa                                                                                         <  1:2610220/100‑1 (MQ=255)

              ttttGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCCGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATg                                                                                       <  1:1411514/100‑1 (MQ=255)

               tttGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGc                                                                                      <  1:1136930/100‑1 (MQ=255)

                  gCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGAc                                                                                   >  2:2001390/1‑100 (MQ=255)

                    aTGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGc                                                                                 <  2:2064112/100‑1 (MQ=255)

                      gTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTg                                                                               >  1:3279451/1‑100 (MQ=255)

                      gTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTg                                                                               >  1:569791/1‑100 (MQ=255)

                          tgtgTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTcgc                                                                           >  1:50034/1‑100 (MQ=255)

                           gtgtTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTcgcg                                                                          >  2:1585853/1‑100 (MQ=255)

                           gtgtTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTcgcg                                                                          >  1:149461/1‑100 (MQ=255)

                             gtTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTc                                                                        <  1:2001373/100‑1 (MQ=255)

                             gtTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTc                                                                        <  2:2790241/100‑1 (MQ=255)

                                 cTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTAt                                                                    >  1:3299243/1‑100 (MQ=255)

                                  tGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATc                                                                   >  1:1011452/1‑100 (MQ=255)

                                  tGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATc                                                                   >  2:1980049/1‑100 (MQ=255)

                                  tGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATc                                                                   >  1:2683882/1‑100 (MQ=255)

                                  tGTAAATTCGGTGTGGTCGGATGCACTACGCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATTCGACGCTGTCGCGTCTTa                                                                     <  1:1107588/98‑1 (MQ=21)

                                   gTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTAtan                                                                  <  1:1179153/100‑3 (MQ=255)

                                   gTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCa                                                                  >  1:2273986/1‑100 (MQ=255)

                                     aaaTTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAgg                                                                >  1:2410766/1‑100 (MQ=255)

                                      aaTTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGc                                                               >  1:793736/1‑100 (MQ=255)

                                      aaTTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGc                                                               <  2:121062/100‑1 (MQ=255)

                                      aaTTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGc                                                               <  2:1114473/100‑1 (MQ=255)

                                       aTTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGcc                                                              <  2:3457502/100‑1 (MQ=255)

                                       aTTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGc                                                               <  1:1873380/99‑1 (MQ=255)

                                        ttCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCt                                                             <  1:3247931/100‑1 (MQ=255)

                                            gtgtTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACaa                                                         <  2:402193/100‑1 (MQ=255)

                                             tgttgtCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAc                                                        <  1:363223/100‑1 (MQ=255)

                                              gttgtCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACt                                                       >  2:649703/1‑100 (MQ=255)

                                              gttgtCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACt                                                       >  2:2377818/1‑100 (MQ=255)

                                                 gtCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTa                                                      <  1:745256/98‑1 (MQ=255)

                                                  tCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACaggtcggc                                                   <  2:1565729/100‑8 (MQ=255)

                                                  tCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTg                                                   <  2:3226400/100‑1 (MQ=255)

                                                  tCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCACCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTg                                                   <  1:539097/100‑1 (MQ=255)

                                                   cgaaTGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGc                                                  >  2:2857824/4‑100 (MQ=255)

                                                   cGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGc                                                  >  2:712710/1‑100 (MQ=255)

                                                    ggATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGcc                                                 <  1:1789644/100‑1 (MQ=255)

                                                    ggATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGcc                                                 >  1:2486518/1‑100 (MQ=255)

                                                     gATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCg                                                <  2:1224098/100‑1 (MQ=255)

                                                      aTGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCCACGCTGTCGCGTCTTATCAGGCCTTCAACTATTGCCGa                                               <  1:2139678/100‑1 (MQ=255)

                                                       tGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGAc                                              >  2:2281230/1‑100 (MQ=255)

                                                       tGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGAc                                              >  2:2427596/1‑100 (MQ=255)

                                                           cGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGt                                          >  1:1823340/1‑100 (MQ=255)

                                                           cGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGt                                          >  2:674211/1‑100 (MQ=255)

                                                                tgattgccggatgcggcgcgagcgccttatccggcCATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGcc                                     >  2:1625534‑M2/36‑100 (MQ=255)

                                                                cGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGcc                                     >  2:168257/1‑100 (MQ=255)

                                                                cGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGcc                                     <  2:2988131/100‑1 (MQ=255)

                                                                 gTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCt                                    >  2:79766/1‑100 (MQ=255)

                                                                  tAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTg                                   <  2:1011460/100‑1 (MQ=255)

                                                                   ttgccggatgcggcgcgagcgccttatccggcAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTGATACGAATGCCGACCTGTAGGc                                      >  1:163551‑M2/33‑96 (MQ=255)

                                                                    ggCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGAt                                 >  2:1828623/1‑100 (MQ=255)

                                                                    ggCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGAt                                 >  2:2124592/1‑100 (MQ=255)

                                                                    ggCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGAt                                 >  2:3427854/1‑100 (MQ=255)

                                                                     gccggatgcggcgcgagcgccttatccggcAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATa                                >  1:2175755‑M2/31‑100 (MQ=255)

                                                                     gccggatgcggcacaagtgccttatccggcAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATa                                >  1:642467‑M2/31‑100 (MQ=255)

                                                                      CCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATaa                               >  2:1867825‑M1/1‑100 (MQ=255)

                                                                      CCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATaa                               >  2:1311630‑M1/1‑100 (MQ=255)

                                                                        GGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAgg                             >  1:649699‑M1/1‑100 (MQ=255)

                                                                        GGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAgg                             >  1:2377799‑M1/1‑100 (MQ=255)

                                                                           TAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCAc                          <  1:2838673‑M1/100‑1 (MQ=255)

                                                                            aaGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACt                         <  2:109532/100‑1 (MQ=255)

                                                                            aaGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACt                         <  2:532102/100‑1 (MQ=255)

                                                                             aGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACtt                        >  2:2526739/1‑100 (MQ=255)

                                                                              ggCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACtt                        >  1:1280404/1‑99 (MQ=255)

                                                                              ggCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTtg                       >  1:3101885/1‑100 (MQ=255)

                                                                              ggCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTtg                       >  1:2883162/1‑100 (MQ=255)

                                                                              ggCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTtg                       <  1:2787949/100‑1 (MQ=255)

                                                                              ggCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTtg                       <  2:564151/100‑1 (MQ=255)

                                                                               gcgcTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTtgt                      >  2:1351592/1‑100 (MQ=255)

                                                                               gcgcTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTtgt                      >  1:879675/1‑100 (MQ=255)

                                                                                cgcTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTtgtg                     >  1:2520966/1‑100 (MQ=255)

                                                                                 gcTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGc                    <  2:3287045/100‑1 (MQ=40)

                                                                                  cTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGcc                   <  2:572699/100‑1 (MQ=40)

                                                                                  cTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGcc                   <  2:3186095/100‑1 (MQ=40)

                                                                                   tCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCg                  <  2:2669058/100‑1 (MQ=38)

                                                                                      cgccgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCAt               >  2:2595195/1‑100 (MQ=35)

                                                                                      cgccgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCAt               <  1:674207/100‑1 (MQ=35)

                                                                                        ccgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGCAGGCCTGATAAGGCACTTGTGCCGCATcc             >  1:2087603/1‑100 (MQ=17)

                                                                                           cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGc          <  2:341860/100‑1 (MQ=33)

                                                                                            atccggcAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGca         <  1:567080‑M2/93‑1 (MQ=255)

                                                                                             tccggcAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGcaa        >  2:3262741‑M2/7‑100 (MQ=255)

                                                                                             tccggcAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGcaa        <  2:637489‑M2/94‑1 (MQ=255)

                                                                                               cggcAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGcaatc      >  2:2898759‑M2/5‑100 (MQ=255)

                                                                                               cggcAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATCCCCCCCCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGcaatc      >  2:2632648‑M2/5‑100 (MQ=255)

                                                                                                ggcAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTATGCCTGATAAGGCACTTGTGCCGCATCCGGcaatca     >  1:1560011‑M2/4‑100 (MQ=255)

                                                                                                ggcAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGcaatca     <  2:1420606‑M2/97‑1 (MQ=255)

                                                                                                   aatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATg  <  2:2620625/100‑1 (MQ=33)

AGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATG  >  NC_000913/4094251‑4094449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.