New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4433109 =146 (1.140)9 (0.080) 8/166 NT 6.5% intergenic (‑53/+55) ytfF/qorB DMT transporter family inner membrane protein/NAD(P)H:quinone oxidoreductase
?NC_000913 4433147 = 122 (1.020)intergenic (‑91/+17) ytfF/qorB DMT transporter family inner membrane protein/NAD(P)H:quinone oxidoreductase
Rejected: Frequency below cutoff threshold.

Only 100 of 166 total aligned reads displayed.

CTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGC  >  NC_000913/4433049‑4433246
                                                                                                  |                                                                                                   
gttagccgaaagcgtaagccatctttttaatgttaataactagttaattaaagtggcatcCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGggagga                                                                                                    >  2:1537052‑M1/61‑100 (MQ=255)
 ttagccgaaagcgtaagccatctttttaatgttaataactagttaattaaagtggcatcCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGAt                                                                                                   >  2:343165‑M1/60‑100 (MQ=255)
 ttagccgaaagcgtaagccatctttttaatgttaataactagttaattaaagtggcatcCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGAt                                                                                                   >  2:2474188‑M1/60‑100 (MQ=255)
  aaTCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGggagggcc                                                                                                  >  1:1191216/1‑97 (MQ=255)
   aTCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGc                                                                                                 >  1:1763116/1‑100 (MQ=255)
    tCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGcc                                                                                                >  2:137683/1‑100 (MQ=255)
    tCATTACTGGCATCCACTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGcc                                                                                                <  1:2024086/100‑1 (MQ=255)
      aTTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCAc                                                                                              <  2:14140/100‑1 (MQ=255)
      aTTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCAc                                                                                              <  2:3063587/100‑1 (MQ=255)
         aCTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACttt                                                                                           <  1:319081/100‑1 (MQ=255)
          cTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTtta                                                                                          <  2:3301930/100‑1 (MQ=255)
                tCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAAc                                                                                    <  1:1057510/100‑1 (MQ=255)
                  cATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTa                                                                                  >  2:349409/1‑100 (MQ=255)
                  cATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTa                                                                                  >  1:2168507/1‑100 (MQ=255)
                  cATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTa                                                                                  >  1:3409552/1‑100 (MQ=255)
                  cATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGCCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTa                                                                                  >  2:404587/1‑100 (MQ=255)
                  cATTGATCTGTCAGAAGAAAGTTCAGAAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACt                                                                                   <  1:2599463/99‑1 (MQ=255)
                   aTTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAg                                                                                 >  2:462609/1‑100 (MQ=255)
                    ttGATCTGTCAGAAGAAAGTTCAGTAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGt                                                                                <  2:636634/100‑1 (MQ=255)
                    ttGATCGGTCTGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGt                                                                                <  2:1308029/100‑1 (MQ=255)
                     tGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGtt                                                                               <  2:1165603/100‑1 (MQ=255)
                      gATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGtta                                                                              >  2:1860196/1‑100 (MQ=255)
                      gATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGtta                                                                              >  1:2836253/1‑100 (MQ=255)
                      gATCTGTCAGAAGAAAGTTCAGGAAGCAGACAAGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGtta                                                                              >  2:3276542/1‑100 (MQ=255)
                       aTCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGttat                                                                             <  2:1544402/100‑1 (MQ=255)
                       aTCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGttat                                                                             <  2:3171947/100‑1 (MQ=255)
                       aTCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGttat                                                                             <  1:135912/100‑1 (MQ=255)
                          tGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTaa                                                                          >  1:2652509/1‑100 (MQ=255)
                          tGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTaa                                                                          >  2:892638/1‑100 (MQ=255)
                          tGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTaa                                                                          >  2:2763977/1‑100 (MQ=255)
                          tGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTaa                                                                          <  2:3024136/100‑1 (MQ=255)
                           gTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAAc                                                                         >  2:1879214/1‑100 (MQ=255)
                             cAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACAt                                                                       <  1:2224662/100‑1 (MQ=255)
                             cAGAAGAAAATTCAGGAAGCAGACATGATTGCGCCCGGCATACAGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACAt                                                                       <  1:3172150/100‑1 (MQ=255)
                               gaagaaAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTa                                                                     >  1:2462896/1‑100 (MQ=255)
                               gaagaaAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTa                                                                     >  2:2926940/1‑100 (MQ=255)
                                aagaaAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGTATGCCACTTTAATTAACTAGTTATTAACATTaa                                                                    >  2:430767/1‑100 (MQ=255)
                                  gaaAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTaaaa                                                                  <  2:2061827/100‑1 (MQ=255)
                                  gaaAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTaaaa                                                                  <  2:2400475/100‑1 (MQ=255)
                                    aaGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAg                                                                >  1:934889/1‑100 (MQ=255)
                                       ttCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATg                                                             <  1:2765481/100‑1 (MQ=255)
                                        tCAGGAAGCAGAGATGGTTGGTGCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATg                                                             <  1:818460/99‑1 (MQ=255)
                                         cAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGc                                                           >  1:1019827/1‑100 (MQ=255)
                                           ggAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCtt                                                         >  1:2463253/1‑100 (MQ=255)
                                            gAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTa                                                        <  1:2488101/100‑1 (MQ=255)
                                             aaGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTAc                                                       >  1:600073/1‑100 (MQ=255)
                                              aGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACg                                                      >  2:1811461/1‑100 (MQ=255)
                                                cAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCt                                                    >  1:1167008/1‑100 (MQ=255)
                                                   aCATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTc                                                 <  1:56430/100‑1 (MQ=255)
                                                    cATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCg                                                <  2:822901/100‑1 (MQ=255)
                                                     aTGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCgg                                               <  2:1478824/100‑1 (MQ=255)
                                                      tGATTGCTCCCGGCATCCCGTCATTATCAGATAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGc                                              <  1:2328553/100‑1 (MQ=255)
                                                      tGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGc                                              >  1:286574/1‑100 (MQ=255)
                                                      ctcatcctcccgcatcctctctgataatgacgggatgccgggagGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGc                                              <  2:2952351‑M2/56‑1 (MQ=255)
                                                        catcctcccgcatcctctctgataatgacgggatgccgggagGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCggcag                                            >  1:2952328‑M2/43‑98 (MQ=255)
                                                          tcctcccgcatcctctctgataatgacgggatgccgggagGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAAc                                          >  2:1537052‑M2/41‑100 (MQ=255)
                                                           gCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACg                                         >  2:958450/1‑100 (MQ=255)
                                                           cctcccgcatcctctctgataatggcgggatgccgggagGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTGCGGCTAACg                                         >  1:2240099‑M2/40‑100 (MQ=255)
                                                            CTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGt                                        <  1:2796756‑M1/100‑1 (MQ=255)
                                                            CTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGt                                        <  1:875706‑M1/100‑1 (MQ=255)
                                                            CTCCCGGCATCCCGGGATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGt                                        >  2:2017203‑M1/1‑100 (MQ=255)
                                                              CCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTg                                      >  2:2981483‑M1/1‑100 (MQ=255)
                                                              CCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTg                                      <  1:891685‑M1/100‑1 (MQ=255)
                                                              CCCGGCATCCCGTAATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTg                                      <  2:2348978‑M1/100‑1 (MQ=255)
                                                               cccgcatcctctctgataatgacgggatgcgggagGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGt                                     >  2:1443486‑M2/36‑100 (MQ=255)
                                                                  gCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGt                                  <  2:566879/100‑1 (MQ=255)
                                                                  gCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGt                                  <  2:2000653/100‑1 (MQ=255)
                                                                  gCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGt                                  >  2:2243885/1‑100 (MQ=255)
                                                                  catcctctctgataatgacgggatgccgggagGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGt                                  >  1:165282‑M2/33‑100 (MQ=255)
                                                                   cATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGtt                                 >  2:3079507/1‑100 (MQ=255)
                                                                    aTCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTg                                <  1:1700217/100‑1 (MQ=255)
                                                                    aTCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTg                                <  1:2566500/100‑1 (MQ=255)
                                                                     tCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTgg                               >  2:2721621/1‑100 (MQ=255)
                                                                       ccGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTggg                              <  1:1717330/99‑1 (MQ=255)
                                                                        cGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTg                            >  2:2593821/1‑100 (MQ=255)
                                                                        cGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTg                            <  2:662895/100‑1 (MQ=255)
                                                                        cGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTg                            >  1:1572661/1‑100 (MQ=255)
                                                                        cGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTAAAAAAAAAAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTg                            <  1:914948/100‑1 (MQ=255)
                                                                           cATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGcc                         <  1:3226266/100‑1 (MQ=255)
                                                                           cATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGcc                         >  1:1302270/1‑100 (MQ=255)
                                                                              tATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCcaat                      <  2:1307561/100‑1 (MQ=255)
                                                                              tATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCcaat                      <  1:2721600/100‑1 (MQ=255)
                                                                              tATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACGAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCcaat                      <  2:2750751/100‑1 (MQ=255)
                                                                               aTCAGAGAGGCTGCGGGAGGATGCCACTTTAATTCACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCca                        >  1:24108/1‑97 (MQ=255)
                                                                               aTCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCcaatc                     <  1:1277985/100‑1 (MQ=255)
                                                                                 cAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCcaatcaa                   >  1:2042860/1‑100 (MQ=255)
                                                                                  agagagGGTGCTGGAGGATGTCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCaaatcact                  >  1:1497382/1‑98 (MQ=255)
                                                                                   gagagGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAAtt                 <  1:454978/100‑1 (MQ=255)
                                                                                    agagGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAAttt                >  1:2183234/1‑100 (MQ=255)
                                                                                     gggatgccgggagGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTg               <  1:343162‑M2/87‑1 (MQ=255)
                                                                                        gATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCt             <  2:751170/99‑1 (MQ=255)
                                                                                            cgggagGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAgtg        >  2:467272‑M2/7‑100 (MQ=255)
                                                                                            cgggagGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAgtg        >  1:2296554‑M2/7‑100 (MQ=255)
                                                                                            cgggagGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAgtg        <  2:2555539‑M2/94‑1 (MQ=255)
                                                                                              ggagGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGtt      <  2:1019836‑M2/96‑1 (MQ=255)
                                                                                                agGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGtttt    <  1:1380564‑M2/98‑1 (MQ=255)
                                                                                                 gGATGCCACTTTAATTAACTAGTTACTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTg   >  1:957032‑M2/2‑100 (MQ=255)
                                                                                                  gaTGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGTCAATCAATTTGCTAAGTGTTTTGc  <  2:1763132/100‑1 (MQ=255)
                                                                                                  gaTGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGc  <  2:1757784/100‑1 (MQ=255)
                                                                                                  gaTGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGc  <  2:1167019/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
CTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGC  >  NC_000913/4433049‑4433246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.